Timothy A. Miller
Orcid: 0000-0003-4513-403X
According to our database1,
Timothy A. Miller
authored at least 90 papers
between 2005 and 2024.
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Bibliography
2024
Cumulus: a federated electronic health record-based learning system powered by Fast Healthcare Interoperability Resources and artificial intelligence.
J. Am. Medical Informatics Assoc., 2024
Automated stratification of trauma injury severity across multiple body regions using multi-modal, multi-class machine learning models.
J. Am. Medical Informatics Assoc., 2024
Identifying Task Groupings for Multi-Task Learning Using Pointwise V-Usable Information.
CoRR, 2024
Lessons Learned on Information Retrieval in Electronic Health Records: A Comparison of Embedding Models and Pooling Strategies.
CoRR, 2024
When Raw Data Prevails: Are Large Language Model Embeddings Effective in Numerical Data Representation for Medical Machine Learning Applications?
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2024, 2024
2023
Improving model transferability for clinical note section classification models using continued pretraining.
J. Am. Medical Informatics Assoc., December, 2023
Representing and utilizing clinical textual data for real world studies: An OHDSI approach.
J. Biomed. Informatics, June, 2023
J. Biomed. Informatics, February, 2023
Automatic Extraction of Medication Mentions from Tweets - Overview of the BioCreative VII Shared Task 3 Competition.
Database J. Biol. Databases Curation, February, 2023
Considerations for health care institutions training large language models on electronic health records.
CoRR, 2023
Leveraging A Medical Knowledge Graph into Large Language Models for Diagnosis Prediction.
CoRR, 2023
Natural language processing to automatically extract the presence and severity of esophagitis in notes of patients undergoing radiotherapy.
CoRR, 2023
Progress Note Understanding - Assessment and Plan Reasoning: Overview of the 2022 N2C2 Track 3 Shared Task.
CoRR, 2023
Proceedings of the 22nd Workshop on Biomedical Natural Language Processing and BioNLP Shared Tasks, 2023
Two-Stage Fine-Tuning for Improved Bias and Variance for Large Pretrained Language Models.
Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 2023
Proceedings of the 5th Clinical Natural Language Processing Workshop, 2023
2022
Confederated learning in healthcare: Training machine learning models using disconnected data separated by individual, data type and identity for Large-Scale health system Intelligence.
J. Biomed. Informatics, 2022
A scoping review of publicly available language tasks in clinical natural language processing.
J. Am. Medical Informatics Assoc., 2022
Classifying unstructured electronic consult messages to understand primary care physician specialty information needs.
J. Am. Medical Informatics Assoc., 2022
Summarizing Patients Problems from Hospital Progress Notes Using Pre-trained Sequence-to-Sequence Models.
CoRR, 2022
Hierarchical Annotation for Building A Suite of Clinical Natural Language Processing Tasks: Progress Note Understanding.
Proceedings of the Thirteenth Language Resources and Evaluation Conference, 2022
2021
Deep representation learning of patient data from Electronic Health Records (EHR): A systematic review.
J. Biomed. Informatics, 2021
Comput. Linguistics, 2021
Proceedings of the 15th International Workshop on Semantic Evaluation, 2021
EntityBERT: Entity-centric Masking Strategy for Model Pretraining for the Clinical Domain.
Proceedings of the 20th Workshop on Biomedical Language Processing, 2021
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
2020
J. Am. Medical Informatics Assoc., 2020
Federated pretraining and fine tuning of BERT using clinical notes from multiple silos.
CoRR, 2020
Proceedings of the 19th SIGBioMed Workshop on Biomedical Language Processing, 2020
Proceedings of the AMIA 2020, 2020
Deep Representation Learning of Patient Data from Electronic Health Records: A Systematic Review.
Proceedings of the AMIA 2020, 2020
Learning Patient Representations from Electronic Health Records across Diverse Data Types.
Proceedings of the AMIA 2020, 2020
Proceedings of the AMIA 2020, 2020
Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis, 2020
Proceedings of the 3rd Clinical Natural Language Processing Workshop, 2020
2019
J. Biomed. Informatics, 2019
Toward a clinical text encoder: pretraining for clinical natural language processing with applications to substance misuse.
J. Am. Medical Informatics Assoc., 2019
Confederated Machine Learning on Horizontally and Vertically Separated Medical Data for Large-Scale Health System Intelligence.
CoRR, 2019
Proceedings of the 2019 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2019
Proceedings of the 18th BioNLP Workshop and Shared Task, 2019
Towards a Universal Document-Level Clinical Text Encoder: Methods for Neural Network Pre-training with Applications to Substance Misuse.
Proceedings of the AMIA 2019, 2019
Proceedings of the 57th Conference of the Association for Computational Linguistics, 2019
Proceedings of the Tenth International Workshop on Health Text Mining and Information Analysis LOUHI@EMNLP 2019, 2019
2018
Trans. Assoc. Comput. Linguistics, 2018
CoRR, 2018
Proceedings of the Seventh Joint Conference on Lexical and Computational Semantics, 2018
Proceedings of the 2018 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2018
Depth-bounding is effective: Improvements and Evaluation of Unsupervised PCFG Induction.
Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, Brussels, Belgium, October 31, 2018
Self-training improves Recurrent Neural Networks performance for Temporal Relation Extraction.
Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis, 2018
2017
J. Biomed. Informatics, 2017
Repeat before Forgetting: Spaced Repetition for Efficient and Effective Training of Neural Networks.
Proceedings of the 2017 Conference on Empirical Methods in Natural Language Processing, 2017
Proceedings of the 15th Conference of the European Chapter of the Association for Computational Linguistics, 2017
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017
Representations of Time Expressions for Temporal Relation Extraction with Convolutional Neural Networks.
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017
DeepPhe - A Natural Language Processing System for Extracting Cancer Phenotypes from Clinical Records.
Proceedings of the AMIA 2017, 2017
Recurrent Neural Network Architectures for Event Extraction from Italian Medical Reports.
Proceedings of the Artificial Intelligence in Medicine, 2017
2016
J. Am. Medical Informatics Assoc., 2016
Proceedings of the COLING 2016, 2016
Proceedings of the 15th Workshop on Biomedical Natural Language Processing, 2016
Proceedings of the 15th Workshop on Biomedical Natural Language Processing, 2016
Proceedings of the AMIA 2016, 2016
2015
Automatic identification of methotrexate-induced liver toxicity in patients with rheumatoid arthritis from the electronic medical record.
J. Am. Medical Informatics Assoc., 2015
Proceedings of the Workshop on Biomedical Natural Language Processing, BioNLP@IJCNLP 2015, 2015
2014
J. Am. Medical Informatics Assoc., 2014
Proceedings of the 52nd Annual Meeting of the Association for Computational Linguistics, 2014
2013
Proceedings of the Workshop on NLP for Medicine and Biology associated with RANLP 2013, 2013
Proceedings of the 2013 Workshop on Biomedical Natural Language Processing, 2013
Proceedings of the AMIA 2013, 2013
Automatic Prediction of Rheumatoid Arthritis Disease Activity from the Electronic Medical Records.
Proceedings of the AMIA 2013, 2013
Proceedings of the AMIA 2013, 2013
2012
J. Am. Medical Informatics Assoc., 2012
Proceedings of the 2012 Workshop on Biomedical Natural Language Processing, 2012
2011
Proceedings of the 49th Annual Meeting of the Association for Computational Linguistics: Human Language Technologies, 2011
2010
Comput. Linguistics, 2010
Proceedings of the 2010 Workshop on Cognitive Modeling and Computational Linguistics, 2010
2009
Proceedings of the ACL 2009, 2009
2008
Proceedings of the COLING 2008, 2008
Proceedings of the COLING 2008, 2008
Proceedings of the ACL 2008, 2008
2007
Proceedings of the Second ACM SIGCHI/SIGART Conference on Human-Robot Interaction, 2007
2006
Proceedings of the Ninth International Conference on Spoken Language Processing, 2006
2005
Proceedings of the 9th European Conference on Speech Communication and Technology, 2005
Proceedings of the 4th International Joint Conference on Autonomous Agents and Multiagent Systems (AAMAS 2005), 2005
Proceedings of the Knowledge Collection from Volunteer Contributors, 2005