Tilmann Weber

Orcid: 0000-0002-8260-5120

According to our database1, Tilmann Weber authored at least 22 papers between 2011 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

Online presence:

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Bibliography

2024
teemi: An open-source literate programming approach for iterative design-build-test-learn cycles in bioengineering.
PLoS Comput. Biol., 2024

2023
UmetaFlow: an untargeted metabolomics workflow for high-throughput data processing and analysis.
J. Cheminformatics, December, 2023

antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation.
Nucleic Acids Res., July, 2023

MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters.
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Nucleic Acids Res., January, 2023

2022
High-quality genome-scale metabolic network reconstruction of probiotic bacterium Escherichia coli Nissle 1917.
BMC Bioinform., December, 2022

2021
BiG-FAM: the biosynthetic gene cluster families database.
Nucleic Acids Res., 2021

The antiSMASH database version 3: increased taxonomic coverage and new query features for modular enzymes.
Nucleic Acids Res., 2021

antiSMASH 6.0: improving cluster detection and comparison capabilities.
Nucleic Acids Res., 2021

Computational Applications in Secondary Metabolite Discovery (CAiSMD): an online workshop.
J. Cheminformatics, 2021

2020
ARTS 2.0: feature updates and expansion of the Antibiotic Resistant Target Seeker for comparative genome mining.
Nucleic Acids Res., 2020

MIBiG 2.0: a repository for biosynthetic gene clusters of known function.
Nucleic Acids Res., 2020

2019
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline.
Nucleic Acids Res., 2019

The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters.
Nucleic Acids Res., 2019

Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters.
Briefings Bioinform., 2019

2018
Patscanui: an intuitive web interface for searching patterns in DNA and protein data.
Nucleic Acids Res., 2018

2017
antiSMASH 4.0 - improvements in chemistry prediction and gene cluster boundary identification.
Nucleic Acids Res., 2017

The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters.
Nucleic Acids Res., 2017

The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery.
Nucleic Acids Res., 2017

2015
antiSMASH 3.0 - a comprehensive resource for the genome mining of biosynthetic gene clusters.
Nucleic Acids Res., 2015

2013
antiSMASH 2.0 - a versatile platform for genome mining of secondary metabolite producers.
Nucleic Acids Res., 2013

2011
NRPSpredictor2 - a web server for predicting NRPS adenylation domain specificity.
Nucleic Acids Res., 2011

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences.
Nucleic Acids Res., 2011


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