Thuy-Diem Nguyen

According to our database, Thuy-Diem Nguyen authored at least 6 papers between 2011 and 2015.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2015

Efficient agglomerative hierarchical clustering for biological sequence analysis

Thuy-Diem Nguyen

PhD thesis, 2015

Efficient and Accurate OTU Clustering with GPU-Based Sequence Alignment and Dynamic Dendrogram Cutting.

Thuy-Diem Nguyen, Bertil Schmidt, Zejun Zheng, Chee-Keong Kwoh

IEEE ACM Trans. Comput. Biol. Bioinform., 2015

2014

IFACEwat: the interfacial water-implemented re-ranking algorithm to improve the discrimination of near native structures for protein rigid docking.

Chinh Tran To Su, Thuy-Diem Nguyen, Jie Zheng, Chee Keong Kwoh

BMC Bioinform., 2014

SparseHC: A Memory-efficient Online Hierarchical Clustering Algorithm.

Thuy-Diem Nguyen, Bertil Schmidt, Chee Keong Kwoh

Proceedings of the International Conference on Computational Science, 2014

Fast dendrogram-based OTU clustering using sequence embedding.

Thuy-Diem Nguyen, Bertil Schmidt, Chee-Keong Kwoh

Proceedings of the 5th ACM Conference on Bioinformatics, 2014

2011

CRiSPy-CUDA: Computing Species Richness in 16S rRNA Pyrosequencing Datasets with CUDA.

Zejun Zheng, Thuy-Diem Nguyen, Bertil Schmidt

Proceedings of the Pattern Recognition in Bioinformatics, 2011