Thomas L. Casavant

According to our database, Thomas L. Casavant authored at least 79 papers between 1986 and 2022.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of three.

2022

Representative random sampling: an empirical evaluation of a novel bin stratification method for model performance estimation.

Michael C. Rendleman, Brian J. Smith, Guadalupe Canahuate, Terry A. Braun, John M. Buatti, Thomas L. Casavant

Stat. Comput., 2022

2019

Machine learning with the TCGA-HNSC dataset: improving usability by addressing inconsistency, sparsity, and high-dimensionality.

Michael C. Rendleman, John M. Buatti, Terry A. Braun, Brian J. Smith, Chibuzo Nwakama, Reinhard R. Beichel, Bartley Brown, Thomas L. Casavant

BMC Bioinform., 2019

2017

Development of a radiobiological evaluation tool to assess the expected clinical impacts of contouring accuracy between manual and semi-automated segmentation algorithms.

Yusung Kim, Kaustubh Anil Patwardhan, Reinhard R. Beichel, Brian J. Smith, Christopher Mart, Kristin A. Plichta, Tangel Chang, Milan Sonka, Michael M. Graham, Vince Magnotta, Thomas L. Casavant, Junyi Xia, John M. Buatti

Proceedings of the 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2017

2015

CNV-ROC: A cost effective, computer-aided analytical performance evaluator of chromosomal microarrays.

Corey W. Goodman, Heather J. Major, William D. Walls, Val C. Sheffield, Thomas L. Casavant, Benjamin W. Darbro

J. Biomed. Informatics, 2015

2014

Cordova: Web-based management of genetic variation data.

Sean S. Ephraim, Nikhil Anand, Adam P. DeLuca, Kyle R. Taylor, Diana L. Kolbe, Allen C. Simpson, Hela Azaiez, Christina M. Sloan, A. Eliot Shearer, Andrea R. Hallier, Thomas L. Casavant, Todd E. Scheetz, Richard J. H. Smith, Terry A. Braun

Bioinform., 2014

2013

Computational identification of operon-like transcriptional loci in eukaryotes.

Kishore Nannapaneni, Yehuda Ben-Shahar, Henry L. Keen, Michael J. Welsh, Thomas L. Casavant, Todd E. Scheetz

Comput. Biol. Medicine, 2013

2012

Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data.

Jinlu Cai, Henry L. Keen, Curt D. Sigmund, Thomas L. Casavant

J. Integr. Bioinform., 2012

2011

Validation of computational prediction of horizontal gene transfer events - XenoCluster.

Jesse D. Walters, Thomas B. Bair, Terry A. Braun, Todd E. Scheetz, John P. Robinson, Thomas L. Casavant

J. Supercomput., 2011

AudioGene: Computer-based prediction of genetic factors involved in non-syndromic hearing impairment.

Kyle R. Taylor, Adam P. DeLuca, Corey W. Goodman, Bruce W. Tompkins, Todd E. Scheetz, Michael S. Hildebrand, Patrick L. M. Huygen, Richard J. H. Smith, Terry A. Braun, Thomas L. Casavant

Proceedings of the 9th IEEE/ACS International Conference on Computer Systems and Applications, 2011

Sequencing and disease variation detection tools and techniques.

Adam P. DeLuca, Alex H. Wagner, Kyle R. Taylor, Ben Faga, David Thole, Val C. Sheffield, Edwin M. Stone, Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun

Proceedings of the 9th IEEE/ACS International Conference on Computer Systems and Applications, 2011

2009

Multi-granularity Parallel Computing in a Genome-Scale Molecular Evolution Application.

Jesse D. Walters, Thomas B. Bair, Terry A. Braun, Todd E. Scheetz, John P. Robinson, Thomas L. Casavant

Proceedings of the Parallel Computing Technologies, 10th International Conference, 2009

2008

A knowledge-based approach to predict intragenic deletions or duplications.

Krishna R. Kalari, Thomas L. Casavant, Todd E. Scheetz

Bioinform., 2008

2007

Transcript Annotation Prioritization and Screening System (TRApss) for Mutation Screening.

Brian O'Leary, Steven G. Davis, Michael F. Smith, Bartley Brown, Mathew B. Kemp, Hakeem G. Almabrazi, Jason A. Grundstad, Thomas Burns, Vladimir Leontiev, Jeaneen Andorf, Abbot F. Clark, Val C. Sheffield, Thomas L. Casavant, Todd E. Scheetz, Edwin M. Stone, Terry A. Braun

J. Bioinform. Comput. Biol., 2007

2006

First Exons and Introns - A Survey of GC Content and Gene Structure in the Human Genome.

Krishna R. Kalari, Melanie Casavant, Thomas B. Bair, Henry L. Keen, Josep M. Comeron, Thomas L. Casavant, Todd E. Scheetz

Silico Biol., 2006

2005

Gene transcript clustering: a comparison of parallel approaches.

Todd E. Scheetz, Nishank Trivedi, Kevin T. Pedretti, Terry A. Braun, Thomas L. Casavant

Future Gener. Comput. Syst., 2005

XenoCluster: A Grid Computing Approach to Finding Ancient Evolutionary Genetic Anomalies.

Jesse D. Walters, Thomas L. Casavant, John P. Robinson, Thomas B. Bair, Terry A. Braun, Todd E. Scheetz

Proceedings of the Parallel Computing Technologies, 2005

2003

Identifying Candidate Disease Genes with High-Performance Computing.

Terry A. Braun, Todd E. Scheetz, Gregg Webster, Abe Clark, Edwin M. Stone, Val C. Sheffield, Thomas L. Casavant

J. Supercomput., 2003

ESTprep: Preprocessing CDNA Sequence Reads.

Todd E. Scheetz, Nishank Trivedi, Chad A. Roberts, Tamara Kucaba, Brian Berger, Natalie L. Robinson, Clayton L. Birkett, Allen J. Gavin, Brian O'Leary, Terry A. Braun, Maria F. Bonaldo, John P. Robinson, Val C. Sheffield, Marcelo Bento Soares, Thomas L. Casavant

Bioinform., 2003

Alternative Parallelization Strategies in EST Clustering.

Nishank Trivedi, Kevin T. Pedretti, Terry A. Braun, Todd E. Scheetz, Thomas L. Casavant

Proceedings of the Parallel Computing Technologies, 2003

2002

Parallel creation of non-redundant gene indices from partial mRNA transcripts.

Nishank Trivedi, Jared Bischof, Steve Davis, Kevin T. Pedretti, Todd E. Scheetz, Terry A. Braun, Chad A. Roberts, Natalie L. Robinson, Val C. Sheffield, Marcelo Bento Soares, Thomas L. Casavant

Future Gener. Comput. Syst., 2002

Pooled library tissue tags for EST-based gene discovery.

Allen J. Gavin, Todd E. Scheetz, Chad A. Roberts, Brian O'Leary, Terry A. Braun, Val C. Sheffield, Marcelo Bento Soares, John P. Robinson, Thomas L. Casavant

Bioinform., 2002

2001

A parallel/distributed architecture for hierarchically heterogeneous web-based cooperative applications.

Thomas L. Casavant, Terry A. Braun, Sureshkumar Kaliannan, Todd E. Scheetz, Kyle J. Munn, Clayton L. Birkett

Future Gener. Comput. Syst., 2001

Parallelization of local BLAST service on workstation clusters.

R. C. Braun, Kevin T. Pedretti, Thomas L. Casavant, Todd E. Scheetz, Clayton L. Birkett, Chad A. Roberts

Future Gener. Comput. Syst., 2001

A Parallel Expressed Sequence Tag (EST) Clustering Program.

Kevin T. Pedretti, Todd E. Scheetz, Terry A. Braun, Chad A. Roberts, Natalie L. Robinson, Thomas L. Casavant

Proceedings of the Parallel Computing Technologies, 2001

I-DOCS: Distributed Agent-Assisted Knowledge Fusion for Disease Gene Discovery.

Andrew B. Williams, Todd A. Krygowski, Thomas L. Casavant

Proceedings of the Eigth International Conference on Parallel and Distributed Systems, 2001

1999

Three Complementary Approaches to Parallelization of Local BLAST Service on Workstation Clusters (invited paper).

Kevin T. Pedretti, Thomas L. Casavant, R. C. Braun, Todd E. Scheetz, Clayton L. Birkett, Chad A. Roberts

Proceedings of the Parallel Computing Technologies, 1999

A Parallel/Distributed Srchitecture for Hierarcally Heterogeneous Web-Based Cooperative Applications.

Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun, Kyle J. Munn, Sureshkumar Kaliannan

Proceedings of the High-Performance Computing and Networking, 7th International Conference, 1999

1998

GenoMap: A Distributed System for Unifying Genotyping and Genetic Linkage Analysis.

Todd E. Scheetz, Terry A. Braun, Kyle J. Munn, Edwin M. Stone, Val C. Sheffield, Thomas L. Casavant

Parallel Comput., 1998

1997

Perspectives on high performance network computing.

Volker Strumpen, Balkrishna Ramkumar, Thomas L. Casavant, Sudhakar M. Reddy

Future Gener. Comput. Syst., 1997

Using Run-Time Uncertainty to Robustly Schedule Parallel Computation.

Richard D. Dietz, Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun, Mark S. Andersland

Proceedings of the Parallel Computing Technologies, 1997

Modeling the impact of run-time uncertainty on optimal computation scheduling using feedback.

Richard D. Dietz, Thomas L. Casavant, Todd E. Scheetz, Terry A. Braun, Mark S. Andersland

Proceedings of the 1997 International Conference on Parallel Processing (ICPP '97), 1997

1996

Accounting for Uncertainty in the Recovers of Traces for Parallel Computing Systems.

Todd E. Scheetz, Julie A. Gannon, Richard D. Dietz, Terry A. Braun, Thomas L. Casavant, Mark S. Andersland

Proceedings of the Parcella 1996, 1996

Mapping Techniques for Parallel Evaluation of Chains of Recurrences.

Eugene V. Zima, Karthi R. Vadivelu, Thomas L. Casavant

Proceedings of IPPS '96, 1996

Perspectives for High Performance Computing in Workstation Networks.

Volker Strumpen, Balkrishna Ramkumar, Thomas L. Casavant, Sudhakar M. Reddy

Proceedings of the High-Performance Computing and Networking, 1996

1995

Implementing communication latency hiding in high-latency computer networks.

Volker Strumpen, Thomas L. Casavant

Proceedings of the High-Performance Computing and Networking, 1995

1994

Trace Recovery in Multi-Processing Systems: Architectural Considerations.

Julie A. Gannon, K. J. Williams, Mark S. Andersland, Thomas L. Casavant, J. E. Lummp Jr.

Proceedings of the 1994 International Conference on Parallel Processing, 1994

Exploting communication Latency Hiding for Parallel Network.

Volker Strumpen, Thomas L. Casavant

Proceedings of the Proceedings 1994 International Conference on Parallel and Distributed Systems, 1994

What Types of Research Papers Should We Be Writing?

Thomas L. Casavant, Chi-Yuan Chin, Wen-Tsuen Chen, Kang G. Shin, Earl E. Swartzlander Jr., Joseph E. Urban

Proceedings of the Proceedings 1994 International Conference on Parallel and Distributed Systems, 1994

Using Perturbation Tracking to Compensate for Intrusion in Message-Passing Systems.

Julie A. Gannon, K. J. Williams, Mark S. Andersland, J. E. Lummp Jr., Thomas L. Casavant

Proceedings of the 14th International Conference on Distributed Computing Systems, 1994

Readings in distributed computing systems.

Thomas L. Casavant, Mukesh Singhal

IEEE, ISBN: 978-0-8186-3032-3, 1994

1993

Tools and Methods for Visualization of Parallel Systems and Computations - Guest Editor's Introduction.

Thomas L. Casavant

J. Parallel Distributed Comput., 1993

The IMPROV Meta-Tool Design Methodology for Visualization of Parallel Programs.

Thomas L. Casavant, James Arthur Kohl

Proceedings of the MASCOTS '93, 1993

Critical Performance Path Analysis, and Efficient Code Generation Issues, for the Seamless Architecture.

D. L. Bright, Samuel A. Fineberg, Brent H. Pease, M. L. Roderick, S. Sundaram, Thomas L. Casavant

Proceedings of the Seventh International Parallel Processing Symposium, 1993

1992

Specification and Analysis of Parallel/Distributed Software and Systems by Petri Nets With Transition Enabling Functions.

Yiannis E. Papelis, Thomas L. Casavant

IEEE Trans. Software Eng., 1992

Report of the Purdue Workshop on Grand Challenges in Computer Architecture for the Support of High Performance Computing.

Howard Jay Siegel, Seth Abraham, William L. Bain, Kenneth E. Batcher, Thomas L. Casavant, Doug DeGroot, Jack B. Dennis, David C. Douglas, Tse-Yun Feng, James R. Goodman, Alan Huang, Harry F. Jordan, J. Robert Jamp, Yale N. Patt, Alan Jay Smith, James E. Smith, Lawrence Snyder, Harold S. Stone, Russ Tuck, Benjamin W. Wah

J. Parallel Distributed Comput., 1992

Models and Algorithms for Coscheduling Compute-Intensive Tasks on a Network of Workstations.

Mikhail J. Atallah, Christina Lock Black, Dan C. Marinescu, Howard Jay Siegel, Thomas L. Casavant

J. Parallel Distributed Comput., 1992

Seamless - a latency-tolerant RISC-based multiprocessor architecture.

Samuel A. Fineberg, Thomas L. Casavant, Brent H. Pease

Proceedings of the 19th Annual International Symposium on Computer Architecture. Gold Coast, 1992

The Seamless Approach to Reconciling Communication and Locality in Distributed-Memory Parallel Systems.

Samuel A. Fineberg, Thomas L. Casavant, Brent H. Pease

Proceedings of the 6th International Parallel Processing Symposium, 1992

A Preliminary Performance Evaluation of the Seamless Parallel Processing System Architecture.

Samuel A. Fineberg, Thomas L. Casavant

Proceedings of the 1992 International Conference on Parallel Processing, 1992

A software engineering, visualization methodology for parallel processing systems.

James Arthur Kohl, Thomas L. Casavant

Proceedings of the Sixteenth Annual International Computer Software and Applications Conference, 1992

1991

Experimental Analysis of a Mixed-Mode Parallel Architecture Using Bitonic Sequence Sorting.

Samuel A. Fineberg, Thomas L. Casavant, Howard Jay Siegel

J. Parallel Distributed Comput., 1991

Distributed Computing Systems (Guest Editors' Introduction).

Mukesh Singhal, Thomas L. Casavant

Computer, 1991

CAPS: A Coding Aid For PASM.

James E. Lumpp Jr., Samuel A. Fineberg, Wayne G. Nation, Thomas L. Casavant, Edward C. Bronson, Howard Jay Siegel, Pierre H. Pero, Thomas Schwederski, Dan C. Marinescu

Commun. ACM, 1991

Use of PARADISE: A Meta-Tool for Visualizing Parallel Systems.

James Arthur Kohl, Thomas L. Casavant

Proceedings of the Fifth International Parallel Processing Symposium, Proceedings, Anaheim, California, USA, April 30, 1991

XPAT: An Interactive Graphical Tool for Synthesis of Concurrent Software Using Petri Nets.

Yiannis E. Papelis, Thomas L. Casavant

Proceedings of the International Conference on Parallel Processing, 1991

Recovering Unconrupted Event Traces from Corrupted Event Traces in Parallel/Distributed Computing Systems.

Mark S. Andersland, Thomas L. Casavant

Proceedings of the International Conference on Parallel Processing, 1991

Debugging and performance monitoring for distributed systems: problems and prospects.

Thomas L. Casavant, Peter C. Bates, Thomas Bemmerl, Gary M. Koob, Daniel A. Reed, Zary Segall

Proceedings of the 10th International Conference on Distributed Computing Systems (ICDCS 1991), 1991

Co-scheduling compute-intensive tasks on a network of workstations: model and algorithms.

Mikhail J. Atallah, Christina Lock, Dan C. Marinescu, Howard Jay Siegel, Thomas L. Casavant

Proceedings of the 10th International Conference on Distributed Computing Systems (ICDCS 1991), 1991

Design of a system for software testing and debugging for multiprocessor avionics systems.

James E. Lumpp Jr., Roger K. Shultz, Thomas L. Casavant

Proceedings of the Fifteenth Annual International Computer Software and Applications Conference, 1991

1990

Experimental Application-Driven Architecture Analysis of an SIMD/MIMD Parallel Processing System.

Edward C. Bronson, Thomas L. Casavant, Leah H. Jamieson

IEEE Trans. Parallel Distributed Syst., 1990

A Communicating Finite Automata Approach to Modeling Distributed Computation and Its Application to Distributed Decision-Making.

Thomas L. Casavant, Jon G. Kuhl

IEEE Trans. Computers, 1990

Models for Monitoring and Debugging Tools for Parallel and Distributed Software.

Dan C. Marinescu, James E. Lumpp Jr., Thomas L. Casavant, Howard Jay Siegel

J. Parallel Distributed Comput., 1990

Experimental analysis of communication/data-conditional aspects of a mixed-mode parallel architecture via synthetic computations.

Samuel A. Fineberg, Thomas L. Casavant, Howard Jay Siegel

Proceedings of the Proceedings Supercomputing '90, New York, NY, USA, November 12-16, 1990, 1990

Optimizing Task Migration Transfers Using Multistage Cube Networks.

Thomas Schwederski, Howard Jay Siegel, Thomas L. Casavant

Proceedings of the 1990 International Conference on Parallel Processing, 1990

An Experimental Analysis of Image Correlation on Shared versus Non-Shared Memory MIMD Parallel Computers.

Silvio Picano, Thomas L. Casavant

Proceedings of the 1990 International Conference on Parallel Processing, 1990

Experimental Analysis of a Mixed-Mode Parallel Architecture Performing Sequence Sorting.

Samuel A. Fineberg, Thomas L. Casavant, Howard Jay Siegel

Proceedings of the 1990 International Conference on Parallel Processing, 1990

Specification and Identification of Events for Debugging and Performance Monitoring of Distributed Multiprocessor Systems.

James E. Lumpp Jr., Howard Jay Siegel, Dan C. Marinescu, Thomas L. Casavant

Proceedings of the 10th International Conference on Distributed Computing Systems (ICDCS 1990), May 28, 1990

Mathematical transformation of Petri-nets for development of parallel/distributed programs.

Yiannis E. Papelis, Thomas L. Casavant

Proceedings of the Fourteenth Annual International Computer Software and Applications Conference, 1990

1989

Task Migration Transfers in Multistage Cube Based Parallel Systems.

Thomas Schwederski, Howard Jay Siegel, Thomas L. Casavant

Proceedings of the International Conference on Parallel Processing, 1989

Experimental analysis of multi-mode fast Fourier transforms on the PASM parallel processing system.

Edward C. Bronson, Thomas L. Casavant, Leah H. Jamieson

Proceedings of the IEEE International Conference on Acoustics, 1989

Software routing support for task migration in hypercube multiprocessor systems.

Michael A. McSherry, Thomas L. Casavant

Proceedings of the 13th Annual International Computer Software and Applications Conference, 1989

A model for monitoring and debugging parallel and distributed software.

Dan C. Marinescu, James E. Lumpp Jr., Thomas L. Casavant, Howard Jay Siegel

Proceedings of the 13th Annual International Computer Software and Applications Conference, 1989

1988

Effects of Response and Stability on Scheduling in Distributed Computing Systems.

Thomas L. Casavant, Jon G. Kuhl

IEEE Trans. Software Eng., 1988

A Taxonomy of Scheduling in General-Purpose Distributed Computing Systems.

Thomas L. Casavant, Jon G. Kuhl

IEEE Trans. Software Eng., 1988

Non-Deterministic Instruction Time Experiments on the PASM System Prototype.

Samuel A. Fineberg, Thomas L. Casavant, Thomas Schwederski, Howard Jay Siegel

Proceedings of the International Conference on Parallel Processing, 1988

Experimental analysis of SIMD recursive digital filtering on the PASM system prototype.

M. J. McPheters Jr., Thomas L. Casavant

Proceedings of the Twelfth International Computer Software and Applications Conference, 1988

Low-level programming of parallel supercomputers.

Thomas L. Casavant

Proceedings of the Twelfth International Computer Software and Applications Conference, 1988

1987

Analysis of Three Dynamic Distributed Load-Balancing Strategies with Varying Global Information Requirements.

Thomas L. Casavant, Jon G. Kuhl

Proceedings of the 7th International Conference on Distributed Computing Systems, 1987

1986

A Formal Model of Distributed Decision-Making and Its Application to Distributed Load Balancing.

Thomas L. Casavant, Jon G. Kuhl

Proceedings of the 6th International Conference on Distributed Computing Systems, 1986