Thomas E. Ouldridge

According to our database, Thomas E. Ouldridge authored at least 11 papers between 2014 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Editorial for the special issue on DNA computing and molecular programming.

Thomas E. Ouldridge, Shelley F. J. Wickham

Nat. Comput., December, 2024

Information propagation in far-from-equilibrium molecular templating networks is optimised by pseudo-equilibrium systems with negligible dissipation.

Benjamin Qureshi, Jenny M. Poulton, Thomas E. Ouldridge

CoRR, 2024

2023

Is stochastic thermodynamics the key to understanding the energy costs of computation?

David H. Wolpert, Jan Korbel, Christopher Lynn, Farita Tasnim, Joshua A. Grochow, Gülce Kardes, James B. Aimone, Vijay Balasubramanian, Eric De Giuli, David Doty, Nahuel Freitas, Matteo Marsili, Thomas E. Ouldridge, Andréa W. Richa, Paul M. Riechers, Édgar Roldán, Brenda M. Rubenstein, Zoltán Toroczkai, Joseph A. Paradiso

CoRR, 2023

Autonomous Learning of Generative Models with Chemical Reaction Network Ensembles.

William Poole, Thomas E. Ouldridge, Manoj Gopalkrishnan

CoRR, 2023

2022

Detailed Balanced Chemical Reaction Networks as Generalized Boltzmann Machines.

William Poole, Thomas E. Ouldridge, Manoj Gopalkrishnan, Erik Winfree

CoRR, 2022

Simulation of reversible molecular mechanical logic gates and circuits.

Ian Seet, Thomas E. Ouldridge, Jonathan P. K. Doye

CoRR, 2022

2020

Optimizing enzymatic catalysts for rapid turnover of substrates with low enzyme sequestration.

Abhishek Deshpande, Thomas E. Ouldridge

Biol. Cybern., 2020

Implementing Non-Equilibrium Networks with Active Circuits of Duplex Catalysts.

Antti Lankinen, Ismael Mullor Ruiz, Thomas E. Ouldridge

Proceedings of the 26th International Conference on DNA Computing and Molecular Programming, 2020

2018

The importance of thermodynamics for molecular systems, and the importance of molecular systems for thermodynamics.

Thomas E. Ouldridge

Nat. Comput., 2018

2017

Chemical Boltzmann Machines.

William Poole, Andrés Ortiz-Muñoz, Abhishek Behera, Nick S. Jones, Thomas E. Ouldridge, Erik Winfree, Manoj Gopalkrishnan

Proceedings of the DNA Computing and Molecular Programming - 23rd International Conference, 2017

2014

Simulating a burnt-bridges DNA motor with a coarse-grained DNA model.

Petr Sulc, Thomas E. Ouldridge, Flavio Romano, Jonathan P. K. Doye, Ard A. Louis

Nat. Comput., 2014