Thomas A. Darden

According to our database, Thomas A. Darden authored at least 10 papers between 1994 and 2011.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of five.

2011

A finite field method for calculating molecular polarizability tensors for arbitrary multipole rank.

Dennis M. Elking, Lalith E. Perera, Robert E. Duke, Thomas A. Darden, Lee G. Pedersen

J. Comput. Chem., 2011

2010

Atomic forces for geometry-dependent point multipole and Gaussian multipole models.

Dennis M. Elking, Lalith E. Perera, Robert E. Duke, Thomas A. Darden, Lee G. Pedersen

J. Comput. Chem., 2010

2007

Gaussian induced dipole polarization model.

Dennis M. Elking, Tom Darden, Robert J. Woods

J. Comput. Chem., 2007

2005

The Amber biomolecular simulation programs.

David A. Case, Thomas E. Cheatham III, Tom Darden, Holger Gohlke, Ray Luo, Kenneth M. Merz Jr., Alexey Onufriev, Carlos Simmerling, Bing Wang, Robert J. Woods

J. Comput. Chem., 2005

2002

Predicted solution structure of zymogen human coagulation FVII.

Lalith E. Perera, Thomas A. Darden, Lee G. Pedersen

J. Comput. Chem., 2002

2001

Gene selection for sample classification based on gene expression data: study of sensitivity to choice of parameters of the GA/KNN method.

Leping Li, Clarice R. Weinberg, Thomas A. Darden, Lee G. Pedersen

Bioinform., 2001

2000

A smooth-particle mesh Ewald method for DL_POLY molecular dynamics simulation package on the Fujitsu VPP700.

Kholmirzo Kholmurodov, William Smith, Kenji Yasuoka, Thomas A. Darden, Toshikazu Ebisuzaki

J. Comput. Chem., 2000

1997

Adventures in Improving the Scaling and Accuracy of a Parallel Molecular Dynamics Program.

Michael F. Crowley, Thomas A. Darden, Thomas E. Cheatham III, David W. Deerfield II

J. Supercomput., 1997

Particle-Mesh Based Methods for Fast Ewald Summation in Molecular Dynamics Simulations.

Thomas A. Darden, Lee G. Pedersen, Abdulnour Y. Toukmaji, Michael F. Crowley, Thomas E. Cheatham

Proceedings of the Eighth SIAM Conference on Parallel Processing for Scientific Computing, 1997

1994

Simulations of the Solution Structure of HIV-1 Protease in the Presence and Absence of Bound Zinc.

Darrin M. York, Lee J. Bartolotti, Thomas A. Darden, Lee G. Pedersen, M. W. Anderson

J. Comput. Chem., 1994