Thanasis Vergoulis

According to our database, Thanasis Vergoulis authored at least 55 papers between 2009 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

3rd International Workshop on Scientific Knowledge Representation, Discovery, and Assessment (Sci-K 2023).

Angelo Antonio Salatino, Yi Bu, Ying Ding, Ágnes Horvát, Yong Huang, Meijun Liu, Paolo Manghi, Andrea Mannocci, Francesco Osborne, Daniel M. Romero, Dimitris Sacharidis, Misha Teplitskiy, Thanasis Vergoulis, Feng Xia, Yujia Zhai

Proceedings of the Companion Proceedings of the ACM Web Conference 2023, 2023

Atrapos: Real-time Evaluation of Metapath Query Workloads.

Serafeim Chatzopoulos, Thanasis Vergoulis, Dimitrios Skoutas, Theodore Dalamagas, Christos Tryfonopoulos, Panagiotis Karras

Proceedings of the ACM Web Conference 2023, 2023

Piloting Topic-Aware Research Impact Assessment Features in BIP! Services.

Serafeim Chatzopoulos, Kleanthis Vichos, Ilias Kanellos, Thanasis Vergoulis

Proceedings of the Semantic Web: ESWC 2023 Satellite Events - Hersonissos, Crete, Greece, May 28, 2023

BIP! NDR (NoDoiRefs): A Dataset of Citations from Papers Without DOIs in Computer Science Conferences and Workshops.

Paris Koloveas, Serafeim Chatzopoulos, Christos Tryfonopoulos, Thanasis Vergoulis

Proceedings of the Linking Theory and Practice of Digital Libraries: 27th International Conference on Theory and Practice of Digital Libraries, 2023

2022

VeTo+: improved expert set expansion in academia.

Serafeim Chatzopoulos, Thanasis Vergoulis, Theodore Dalamagas, Christos Tryfonopoulos

Int. J. Digit. Libr., 2022

ATRAPOS: Evaluating Metapath Query Workloads in Real Time.

Serafeim Chatzopoulos, Thanasis Vergoulis, Dimitrios Skoutas, Theodore Dalamagas, Christos Tryfonopoulos, Panagiotis Karras

CoRR, 2022

Sci-K 2022 - International Workshop on Scientific Knowledge: Representation, Discovery, and Assessment.

Paolo Manghi, Andrea Mannocci, Francesco Osborne, Dimitris Sacharidis, Angelo A. Salatino, Thanasis Vergoulis

Proceedings of the Companion of The Web Conference 2022, Virtual Event / Lyon, France, April 25, 2022

Accepted Tutorials at The Web Conference 2022.

Riccardo Tommasini, Senjuti Basu Roy, Xuan Wang, Hongwei Wang, Heng Ji, Jiawei Han, Preslav Nakov, Giovanni Da San Martino, Firoj Alam, Markus Schedl, Elisabeth Lex, Akash Bharadwaj, Graham Cormode, Milan Dojchinovski, Jan Forberg, Johannes Frey, Pieter Bonte, Marco Balduini, Matteo Belcao, Emanuele Della Valle, Junliang Yu, Hongzhi Yin, Tong Chen, Haochen Liu, Yiqi Wang, Wenqi Fan, Xiaorui Liu, Jamell Dacon, Lingjuan Lye, Jiliang Tang, Aristides Gionis, Stefan Neumann, Bruno Ordozgoiti, Simon Razniewski, Hiba Arnaout, Shrestha Ghosh, Fabian M. Suchanek, Lingfei Wu, Yu Chen, Yunyao Li, Bang Liu, Filip Ilievski, Daniel Garijo, Hans Chalupsky, Pedro A. Szekely, Ilias Kanellos, Dimitris Sacharidis, Thanasis Vergoulis, Nurendra Choudhary, Nikhil Rao, Karthik Subbian, Srinivasan H. Sengamedu, Chandan K. Reddy, Friedhelm Victor, Bernhard Haslhofer, George Katsogiannis-Meimarakis, Georgia Koutrika, Shengmin Jin, Danai Koutra, Reza Zafarani, Yulia Tsvetkov, Vidhisha Balachandran, Sachin Kumar, Xiangyu Zhao, Bo Chen, Huifeng Guo, Yejing Wang, Ruiming Tang, Yang Zhang, Wenjie Wang, Peng Wu, Fuli Feng, Xiangnan He

Proceedings of the Companion of The Web Conference 2022, Virtual Event / Lyon, France, April 25, 2022

BIP! scholar: a service to facilitate fair researcher assessment.

Thanasis Vergoulis, Serafeim Chatzopoulos, Kleanthis Vichos, Ilias Kanellos, Andrea Mannocci, Natalia Manola, Paolo Manghi

Proceedings of the JCDL '22: The ACM/IEEE Joint Conference on Digital Libraries in 2022, Cologne, Germany, June 20, 2022

A Preliminary Assessment of the Article Deduplication Algorithm Used for the OpenAIRE Research Graph.

Kleanthis Vichos, Michele De Bonis, Ilias Kanellos, Serafeim Chatzopoulos, Claudio Atzori, Natalia Manola, Paolo Manghi, Thanasis Vergoulis

Proceedings of the 18th Italian Research Conference on Digital Libraries, 2022

SurvAnnT: Facilitating Community-Led Scientific Surveys and Annotations.

Anargiros Tzerefos, Ilias Kanellos, Serafeim Chatzopoulos, Theodore Dalamagas, Thanasis Vergoulis

Proceedings of the Linking Theory and Practice of Digital Libraries, 2022

2021

Impact-Based Ranking of Scientific Publications: A Survey and Experimental Evaluation.

Ilias Kanellos, Thanasis Vergoulis, Dimitris Sacharidis, Theodore Dalamagas, Yannis Vassiliou

IEEE Trans. Knowl. Data Eng., 2021

BIP4COVID19: Releasing impact measures for articles relevant to COVID-19.

Thanasis Vergoulis, Ilias Kanellos, Serafeim Chatzopoulos, Danae Pla Karidi, Theodore Dalamagas

Quant. Sci. Stud., 2021

New trends in scientific knowledge graphs and research impact assessment.

Paolo Manghi, Andrea Mannocci, Francesco Osborne, Dimitris Sacharidis, Angelo A. Salatino, Thanasis Vergoulis

Quant. Sci. Stud., 2021

Further improvements on estimating the popularity of recently published papers.

Serafeim Chatzopoulos, Thanasis Vergoulis, Ilias Kanellos, Theodore Dalamagas, Christos Tryfonopoulos

Quant. Sci. Stud., 2021

BIP! DB: A Dataset of Impact Measures for Scientific Publications.

Thanasis Vergoulis, Ilias Kanellos, Claudio Atzori, Andrea Mannocci, Serafeim Chatzopoulos, Sandro La Bruzzo, Natalia Manola, Paolo Manghi

Proceedings of the Companion of The Web Conference 2021, 2021

Visualising Scientific Topic Evolution.

Panagiotis Deligiannis, Thanasis Vergoulis, Serafeim Chatzopoulos, Christos Tryfonopoulos

Proceedings of the Companion of The Web Conference 2021, 2021

SCHeMa: Scheduling Scientific Containers on a Cluster of Heterogeneous Machines.

Thanasis Vergoulis, Konstantinos Zagganas, Loukas Kavouras, Martin Reczko, Stelios Sartzetakis, Theodore Dalamagas

Proceedings of the SSDBM 2021: 33rd International Conference on Scientific and Statistical Database Management, 2021

VeTo-web: A Recommendation Tool for the Expansion of Sets of Scholars.

Serafeim Chatzopoulos, Thanasis Vergoulis, Theodore Dalamagas, Christos Tryfonopoulos

Proceedings of the ACM/IEEE Joint Conference on Digital Libraries, 2021

Ranking Papers by their Short-Term Scientific Impact.

Ilias Kanellos, Thanasis Vergoulis, Dimitris Sacharidis, Theodore Dalamagas, Yannis Vassiliou

Proceedings of the 37th IEEE International Conference on Data Engineering, 2021

Simplifying p-value calculation for the unbiased microRNAenrichment analysis, using ML-techniques.

Konstantinos Zagganas, Maria Lioli, Thanasis Vergoulis, Theodore Dalamagas

Proceedings of the Workshops of the EDBT/ICDT 2021 Joint Conference, 2021

Simplifying Impact Prediction for Scientific Articles.

Thanasis Vergoulis, Ilias Kanellos, Giorgos Giannopoulos, Theodore Dalamagas

Proceedings of the Workshops of the EDBT/ICDT 2021 Joint Conference, 2021

SciNeM: A Scalable Data Science Tool for Heterogeneous Network Mining.

Serafeim Chatzopoulos, Thanasis Vergoulis, Panagiotis Deligiannis, Dimitrios Skoutas, Theodore Dalamagas, Christos Tryfonopoulos

Proceedings of the 24th International Conference on Extending Database Technology, 2021

A Cloud-Native NGS Data Processing and Annotation Platform.

Giannis Mouchakis, Babis Kostopoulos, Stasinos Konstantopoulos, Ilias Kanellos, Anargiros Tzerefos, Thanasis Vergoulis, Thodoris Dalamagas

Proceedings of the Heterogeneous Data Management, Polystores, and Analytics for Healthcare, 2021

Ranking Papers by Expected Short-Term Impact.

Ilias Kanellos, Thanasis Vergoulis, Dimitris Sacharidis

Proceedings of the Predicting the Dynamics of Research Impact, 2021

2020

SPHINX: A System for Metapath-based Entity Exploration in Heterogeneous Information Networks.

Serafeim Chatzopoulos, Kostas Patroumpas, Alexandros Zeakis, Thanasis Vergoulis, Dimitrios Skoutas

Proc. VLDB Endow., 2020

Efficient Calculation of Empirical P-values for Association Testing of Binary Classifications.

Konstantinos Zagganas, Thanasis Vergoulis, Spiros Skiadopoulos, Theodore Dalamagas

Proceedings of the SSDBM 2020: 32nd International Conference on Scientific and Statistical Database Management, 2020

VeTo: Expert Set Expansion in Academia.

Thanasis Vergoulis, Serafeim Chatzopoulos, Theodore Dalamagas, Christos Tryfonopoulos

Proceedings of the Digital Libraries for Open Knowledge, 2020

ArtSim: Improved Estimation of Current Impact for Recent Articles.

Serafeim Chatzopoulos, Thanasis Vergoulis, Ilias Kanellos, Theodore Dalamagas, Christos Tryfonopoulos

Proceedings of the ADBIS, TPDL and EDA 2020 Common Workshops and Doctoral Consortium, 2020

Databases and Information Systems in the AI Era: Contributions from ADBIS, TPDL and EDA 2020 Workshops and Doctoral Consortium.

Ladjel Bellatreche, Fadila Bentayeb, Mária Bieliková, Omar Boussaid, Barbara Catania, Paolo Ceravolo, Elena Demidova, Mírian Halfeld Ferrari, María Teresa Gómez-López, Carmem S. Hara, Slavica Kordic, Ivan Lukovic, Andrea Mannocci, Paolo Manghi, Francesco Osborne, Christos Papatheodorou, Sonja Ristic, Dimitris Sacharidis, Oscar Romero, Angelo A. Salatino, Guilaine Talens, Maurice van Keulen, Thanasis Vergoulis, Maja Zumer

Proceedings of the ADBIS, TPDL and EDA 2020 Common Workshops and Doctoral Consortium, 2020

2019

A Study on the Readability of Scientific Publications.

Thanasis Vergoulis, Ilias Kanellos, Anargiros Tzerefos, Serafeim Chatzopoulos, Theodore Dalamagas, Spiros Skiadopoulos

Proceedings of the Digital Libraries for Open Knowledge, 2019

SciTo Trends: Visualising Scientific Topic Trends.

Serafeim Chatzopoulos, Panagiotis Deligiannis, Thanasis Vergoulis, Ilias Kanellos, Christos Tryfonopoulos, Theodore Dalamagas

Proceedings of the Digital Libraries for Open Knowledge, 2019

BIP! Finder: Facilitating Scientific Literature Search by Exploiting Impact-Based Ranking.

Thanasis Vergoulis, Serafeim Chatzopoulos, Ilias Kanellos, Panagiotis Deligiannis, Christos Tryfonopoulos, Theodore Dalamagas

Proceedings of the 28th ACM International Conference on Information and Knowledge Management, 2019

2018

DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA-gene interactions.

Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2018

2017

BUFET: boosting the unbiased miRNA functional enrichment analysis using bitsets.

Konstantinos Zagganas, Thanasis Vergoulis, Maria D. Paraskevopoulou, Ioannis S. Vlachos, Spiros Skiadopoulos, Theodore Dalamagas

BMC Bioinform., 2017

2016

DIANA-mirExTra v2.0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data.

Ioannis S. Vlachos, Thanasis Vergoulis, Maria D. Paraskevopoulou, Filopoimin Lykokanellos, Georgios K. Georgakilas, Penny Georgiou, Serafeim Chatzopoulos, Dimitra Karagkouni, Foteini Christodoulou, Theodore Dalamagas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2016

DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts.

Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios K. Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2016

DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators.

Georgios K. Georgakilas, Ioannis S. Vlachos, Konstantinos Zagganas, Thanasis Vergoulis, Maria D. Paraskevopoulou, Ilias Kanellos, Panayiotis Tsanakas, Dimitris Dellis, Athanasios Fevgas, Theodore Dalamagas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2016

2015

DIANA-miRPath v3.0: deciphering microRNA function with experimental support.

Ioannis S. Vlachos, Konstantinos Zagganas, Maria D. Paraskevopoulou, Georgios K. Georgakilas, Dimitra Karagkouni, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2015

DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA: mRNA interactions.

Ioannis S. Vlachos, Maria D. Paraskevopoulou, Dimitra Karagkouni, Georgios K. Georgakilas, Thanasis Vergoulis, Ilias Kanellos, Ioannis-Laertis Anastasopoulos, Sofia Maniou, Konstantina Karathanou, Despina Kalfakakou, Athanasios Fevgas, Theodore Dalamagas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2015

mirPub: a database for searching microRNA publications.

Thanasis Vergoulis, Ilias Kanellos, Nikos Kostoulas, Georgios K. Georgakilas, Timos K. Sellis, Artemis G. Hatzigeorgiou, Theodore Dalamagas

Bioinform., 2015

TarMiner: automatic extraction of miRNA targets from literature.

Rodothea-Myrsini Tsoupidi, Ilias Kanellos, Thanasis Vergoulis, Ioannis S. Vlachos, Artemis G. Hatzigeorgiou, Theodore Dalamagas

Proceedings of the 27th International Conference on Scientific and Statistical Database Management, 2015

MirPub v2: Towards Ranking and Refining miRNA Publication Search Results.

Ilias Kanellos, Vasiliki Vlachokyriakou, Thanasis Vergoulis, Georgios K. Georgakilas, Yannis Vassiliou, Artemis G. Hatzigeorgiou, Theodore Dalamagas

Proceedings of the Research and Advanced Technology for Digital Libraries, 2015

2014

Προηγμένες υπηρεσίες αναζήτησης και διαχείρισης δεδομένων στις βιοεπιστήμες

Thanasis Vergoulis

PhD thesis, 2014

Publishing Diachronic Life Science Linked Data.

Katerina Gkirtzou, Thanasis Vergoulis, Artemis G. Hatzigeorgiou, Timos K. Sellis, Theodore Dalamagas

Proceedings of the 7th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2014

MR-microT: a MapReduce-based MicroRNA target prediction method.

Ilias Kanellos, Thanasis Vergoulis, Dimitris Sacharidis, Theodore Dalamagas, Artemis G. Hatzigeorgiou, Stelios Sartzetakis, Timos K. Sellis

Proceedings of the Conference on Scientific and Statistical Database Management, 2014

2013

DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows.

Maria D. Paraskevopoulou, Georgios K. Georgakilas, Nikos Kostoulas, Ioannis S. Vlachos, Thanasis Vergoulis, Martin Reczko, Christos Filippidis, Theodore Dalamagas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2013

2012

Approximate regional sequence matching for genomic databases.

Thanasis Vergoulis, Theodore Dalamagas, Dimitris Sacharidis, Timos K. Sellis

VLDB J., 2012

DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways.

Ioannis S. Vlachos, Nikos Kostoulas, Thanasis Vergoulis, Georgios K. Georgakilas, Martin Reczko, Manolis Maragkakis, Maria D. Paraskevopoulou, Kostantinos Prionidis, Theodore Dalamagas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2012

TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support.

Thanasis Vergoulis, Ioannis S. Vlachos, Panagiotis Alexiou, George Georgakilas, Manolis Maragkakis, Martin Reczko, Stefanos Gerangelos, Nectarios Koziris, Theodore Dalamagas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2012

TARCLOUD: A Cloud-Based Platform to Support miRNA Target Prediction.

Thanasis Vergoulis, Michail Alexakis, Theodore Dalamagas, Manolis Maragkakis, Artemis G. Hatzigeorgiou, Timos K. Sellis

Proceedings of the Scientific and Statistical Database Management, 2012

2011

DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association.

Manolis Maragkakis, Thanasis Vergoulis, Panagiotis Alexiou, Martin Reczko, Kyriaki Plomaritou, Mixail Gousis, Kornilios Kourtis, Nectarios Koziris, Theodore Dalamagas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2011

2010

miRGen 2.0: a database of microRNA genomic information and regulation.

Panagiotis Alexiou, Thanasis Vergoulis, Martin Gleditzsch, George Prekas, Theodore Dalamagas, Molly Megraw, Ivo Grosse, Timos K. Sellis, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2010

2009

DIANA-microT web server: elucidating microRNA functions through target prediction.

Manolis Maragkakis, Martin Reczko, Victor A. Simossis, Panagiotis Alexiou, Giorgos L. Papadopoulos, Theodore Dalamagas, Giorgos Giannopoulos, Georgios I. Goumas, Evangelos Koukis, Kornilios Kourtis, Thanasis Vergoulis, Nectarios Koziris, Timos K. Sellis, Panayotis Tsanakas, Artemis G. Hatzigeorgiou

Nucleic Acids Res., 2009

Accurate microRNA target prediction correlates with protein repression levels.

Manolis Maragkakis, Panagiotis Alexiou, Giorgos L. Papadopoulos, Martin Reczko, Theodore Dalamagas, Giorgos Giannopoulos, George I. Goumas, Evangelos Koukis, Kornilios Kourtis, Victor A. Simossis, Praveen Sethupathy, Thanasis Vergoulis, Nectarios Koziris, Timos K. Sellis, Panayotis Tsanakas, Artemis G. Hatzigeorgiou

BMC Bioinform., 2009