Tahsin M. Kurç

According to our database1, Tahsin M. Kurç authored at least 234 papers between 1991 and 2024.

Collaborative distances:

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

On csauthors.net:

Bibliography

2024
PathLDM: Text conditioned Latent Diffusion Model for Histopathology.
Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, 2024

Uncertainty Estimation for Tumor Prediction with Unlabeled Data.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2024

2023
ChampKit: A framework for rapid evaluation of deep neural networks for patch-based histopathology classification.
Comput. Methods Programs Biomed., September, 2023

Effective and efficient active learning for deep learning-based tissue image analysis.
Bioinform., April, 2023

Open and reusable deep learning for pathology with WSInfer and QuPath.
CoRR, 2023

Understanding metric-related pitfalls in image analysis validation.
CoRR, 2023

Unsupervised Stain Decomposition via Inversion Regulation for Multiplex Immunohistochemistry Images.
Proceedings of the Medical Imaging with Deep Learning, 2023

Topology-Guided Multi-Class Cell Context Generation for Digital Pathology.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023

2022
Efficient microscopy image analysis on CPU-GPU systems with cost-aware irregular data partitioning.
J. Parallel Distributed Comput., 2022

AI and Pathology: Steering Treatment and Predicting Outcomes.
CoRR, 2022

Evaluating histopathology transfer learning with ChampKit.
CoRR, 2022

Metrics reloaded: Pitfalls and recommendations for image analysis validation.
CoRR, 2022

A Novel Framework for Characterization of Tumor-Immune Spatial Relationships in Tumor Microenvironment.
CoRR, 2022

Federated Learning for the Classification of Tumor Infiltrating Lymphocytes.
CoRR, 2022

Effective active learning in digital pathology: A case study in tumor infiltrating lymphocytes.
Comput. Methods Programs Biomed., 2022

Learning Topological Interactions for Multi-Class Medical Image Segmentation.
Proceedings of the Computer Vision - ECCV 2022, 2022

2021
Common Limitations of Image Processing Metrics: A Picture Story.
CoRR, 2021

Building robust pathology image analyses with uncertainty quantification.
Comput. Methods Programs Biomed., 2021

Understanding and Leveraging the I/O Patterns of Emerging Machine Learning Analytics.
Proceedings of the Driving Scientific and Engineering Discoveries Through the Integration of Experiment, Big Data, and Modeling and Simulation, 2021

Bootstrapping in-situ workflow auto-tuning via combining performance models of component applications.
Proceedings of the International Conference for High Performance Computing, 2021

In-situ workflow auto-tuning through combining component models.
Proceedings of the PPoPP '21: 26th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, 2021

Multi-Class Cell Detection Using Spatial Context Representation.
Proceedings of the 2021 IEEE/CVF International Conference on Computer Vision, 2021

Generating Longitudinal Synthetic EHR Data with Recurrent Autoencoders and Generative Adversarial Networks.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Informatics to Power Post-COVID Care: A Framework for Patient Care and Secondary Data Use.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020
AI in Medical Imaging Informatics: Current Challenges and Future Directions.
IEEE J. Biomed. Health Informatics, 2020

ADIOS 2: The Adaptable Input Output System. A framework for high-performance data management.
SoftwareX, 2020

Extending the Publish/Subscribe Abstraction for High-Performance I/O and Data Management at Extreme Scale.
IEEE Data Eng. Bull., 2020

In-situ Workflow Auto-tuning via Combining Performance Models of Component Applications.
CoRR, 2020

Dataset of Segmented Nuclei in Hematoxylin and Eosin Stained Histopathology Images of 10 Cancer Types.
CoRR, 2020

Optimizing parameter sensitivity analysis of large-scale microscopy image analysis workflows with multilevel computation reuse.
Concurr. Comput. Pract. Exp., 2020

Weakly-Supervised Deep Stain Decomposition for Multiplex IHC Images.
Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

Automated Assessment of the Curliness of Collagen Fiber in Breast Cancer.
Proceedings of the Computer Vision - ECCV 2020 Workshops, 2020

2019
Sparse autoencoder for unsupervised nucleus detection and representation in histopathology images.
Pattern Recognit., 2019

Multi-objective Parameter Auto-tuning for Tissue Image Segmentation Workflows.
J. Digit. Imaging, 2019

MPI jobs within MPI jobs: A practical way of enabling task-level fault-tolerance in HPC workflows.
Future Gener. Comput. Syst., 2019

Run-time Parameter Sensitivity Analysis Optimizations.
CoRR, 2019

Learning from Thresholds: Fully Automated Classification of Tumor Infiltrating Lymphocytes for Multiple Cancer Types.
CoRR, 2019

Utilizing Automated Breast Cancer Detection to Identify Spatial Distributions of Tumor Infiltrating Lymphocytes in Invasive Breast Cancer.
CoRR, 2019

Label Super Resolution with Inter-Instance Loss.
CoRR, 2019

Sensitivity analysis in digital pathology: Handling large number of parameters with compute expensive workflows.
Comput. Biol. Medicine, 2019

Pancreatic Cancer Detection in Whole Slide Images Using Noisy Label Annotations.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

A Vision for Managing Extreme-Scale Data Hoards.
Proceedings of the 39th IEEE International Conference on Distributed Computing Systems, 2019

Robust Histopathology Image Analysis: To Label or to Synthesize?
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2019

From Whole Slide Tissues to Knowledge: Mapping Sub-cellular Morphology of Cancer.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2019

Increasing Accuracy of Medical CNN Applying Optimization Algorithms: An Image Classification Case.
Proceedings of the 8th Brazilian Conference on Intelligent Systems, 2019

2018
Methods for Segmentation and Classification of Digital Microscopy Tissue Images.
CoRR, 2018

Tuning for Tissue Image Segmentation Workflows for Accuracy and Performance.
CoRR, 2018

Cooperative and out-of-core execution of the irregular wavefront propagation pattern on hybrid machines with Intel® Xeon Phi™.
Concurr. Comput. Pract. Exp., 2018

A View from ORNL: Scientific Data Research Opportunities in the Big Data Age.
Proceedings of the 38th IEEE International Conference on Distributed Computing Systems, 2018

Systems Demonstration: Towards a Services Oriented Platform for Combined Radiology-Pathology Image Analysis and Interpretation.
Proceedings of the AMIA 2018, 2018

2017
Application performance analysis and efficient execution on systems with multi-core CPUs, GPUs and MICs: a case study with microscopy image analysis.
Int. J. High Perform. Comput. Appl., 2017

Unsupervised Histopathology Image Synthesis.
CoRR, 2017

Sparse Autoencoder for Unsupervised Nucleus Detection and Representation in Histopathology Images.
CoRR, 2017

Algorithm sensitivity analysis and parameter tuning for tissue image segmentation pipelines.
Bioinform., 2017

Center-Focusing Multi-task CNN with Injected Features for Classification of Glioma Nuclear Images.
Proceedings of the 2017 IEEE Winter Conference on Applications of Computer Vision, 2017

Evaluation of nucleus segmentation in digital pathology images through large scale image synthesis.
Proceedings of the Medical Imaging 2017: Digital Pathology, 2017

StoreRush: An Application-Level Approach to Harvesting Idle Storage in a Best Effort Environment.
Proceedings of the International Conference on Computational Science, 2017

SparkGIS: Resource Aware Efficient In-Memory Spatial Query Processing.
Proceedings of the 25th ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems, 2017

Computing Just What You Need: Online Data Analysis and Reduction at Extreme Scales.
Proceedings of the Euro-Par 2017: Parallel Processing - 23rd International Conference on Parallel and Distributed Computing, Santiago de Compostela, Spain, August 28, 2017

TGE: Machine Learning Based Task Graph Embedding for Large-Scale Topology Mapping.
Proceedings of the 2017 IEEE International Conference on Cluster Computing, 2017

Parallel and Efficient Sensitivity Analysis of Microscopy Image Segmentation Workflows in Hybrid Systems.
Proceedings of the 2017 IEEE International Conference on Cluster Computing, 2017

20 Years of Digital Pathology - An Overview of the Road Travelled and What is on the Horizon.
Proceedings of the AMIA 2017, 2017

ConvNets with Smooth Adaptive Activation Functions for Regression.
Proceedings of the 20th International Conference on Artificial Intelligence and Statistics, 2017

2016
Efficient Methods and Parallel Execution for Algorithm Sensitivity Analysis with Parameter Tuning on Microscopy Imaging Datasets.
CoRR, 2016

Neural Networks with Smooth Adaptive Activation Functions for Regression.
CoRR, 2016

Hierarchical nucleus segmentation in digital pathology images.
Proceedings of the Medical Imaging 2016: Digital Pathology, San Diego, California, United States, 27 February, 2016

Multi-scale learning based segmentation of glands in digital colonrectal pathology images.
Proceedings of the Medical Imaging 2016: Digital Pathology, San Diego, California, United States, 27 February, 2016

Visualization and Analysis for Near-Real-Time Decision Making in Distributed Workflows.
Proceedings of the 2016 IEEE International Parallel and Distributed Processing Symposium Workshops, 2016

Patch-Based Convolutional Neural Network for Whole Slide Tissue Image Classification.
Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition, 2016

POE: A Pathology Extraction Tool for Finding Attribute-Value Pairs in Glioma Pathology Reports.
Proceedings of the AMIA 2016, 2016

Safe "cloudification" of large images through picker APIs.
Proceedings of the AMIA 2016, 2016

2015
Performance Analysis and Efficient Execution on Systems with multi-core CPUs, GPUs and MICs.
CoRR, 2015

Efficient Multiple Instance Convolutional Neural Networks for Gigapixel Resolution Image Classification.
CoRR, 2015

Scalable analysis of Big pathology image data cohorts using efficient methods and high-performance computing strategies.
BMC Bioinform., 2015

SparkGIS: Efficient Comparison and Evaluation of Algorithm Results in Tissue Image Analysis Studies.
Proceedings of the Biomedical Data Management and Graph Online Querying, 2015

Efficient Irregular Wavefront Propagation Algorithms on Intel(R) Xeon Phi(TM).
Proceedings of the 27th International Symposium on Computer Architecture and High Performance Computing, 2015

Integrative Informatics and Predictive Modeling Support for Population Health.
Proceedings of the AMIA 2015, 2015

OpenHealth Platform for Interactive Contextualization of Population Health Open Data.
Proceedings of the AMIA 2015, 2015

2014
Region templates: Data representation and management for high-throughput image analysis.
Parallel Comput., 2014

Region Templates: Data Representation and Management for Large-Scale Image Analysis.
CoRR, 2014

Parallel content-based sub-image retrieval using hierarchical searching.
Bioinform., 2014

Efficient Execution of Microscopy Image Analysis on CPU, GPU, and MIC Equipped Cluster Systems.
Proceedings of the 26th IEEE International Symposium on Computer Architecture and High Performance Computing, 2014

Comparative Performance Analysis of Intel (R) Xeon Phi (TM), GPU, and CPU: A Case Study from Microscopy Image Analysis.
Proceedings of the 2014 IEEE 28th International Parallel and Distributed Processing Symposium, 2014

2013
Efficient irregular wavefront propagation algorithms on hybrid CPU-GPU machines.
Parallel Comput., 2013

The Analytic Information Warehouse (AIW): A platform for analytics using electronic health record data.
J. Biomed. Informatics, 2013

Research and applications: Cancer Digital Slide Archive: an informatics resource to support integrated in silico analysis of TCGA pathology data.
J. Am. Medical Informatics Assoc., 2013

Semantically Interoperable XML Data.
Int. J. Semantic Comput., 2013

Feature-based analysis of large-scale spatio-temporal sensor data on hybrid architectures.
Int. J. High Perform. Comput. Appl., 2013

Comparative Performance Analysis of Intel Xeon Phi, GPU, and CPU.
CoRR, 2013

High-throughput Analysis of Large Microscopy Image Datasets on CPU-GPU Cluster Platforms.
Proceedings of the 27th IEEE International Symposium on Parallel and Distributed Processing, 2013

High-performance computational analysis of glioblastoma pathology images with database support identifies molecular and survival correlates.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

Clinical Phenotyping with the Analytic Information Warehouse.
Proceedings of the AMIA 2013, 2013

Temporal Abstraction-based Clinical Phenotyping with Eureka!
Proceedings of the AMIA 2013, 2013

2012
Digital Pathology: Data-Intensive Frontier in Medical Imaging.
Proc. IEEE, 2012

Integrated morphologic analysis for the identification and characterization of disease subtypes.
J. Am. Medical Informatics Assoc., 2012

High-throughput Execution of Hierarchical Analysis Pipelines on Hybrid Cluster Platforms
CoRR, 2012

Efficient regression testing of ontology-driven systems.
Proceedings of the International Symposium on Software Testing and Analysis, 2012

Accelerating Large Scale Image Analyses on Parallel, CPU-GPU Equipped Systems.
Proceedings of the 26th IEEE International Parallel and Distributed Processing Symposium, 2012

High Performance Computing for Integrative Analysis of Large Pathology Image Datasets.
Proceedings of the AMIA 2012, 2012

Systematic Modeling, Testing, and Monitoring of Information Integrity in Federated Ontology-driven Data Sources.
Proceedings of the AMIA 2012, 2012

2011
Integrative, Multimodal Analysis of Glioblastoma Using TCGA Molecular Data, Pathology Images, and Clinical Outcomes.
IEEE Trans. Biomed. Eng., 2011

Optimizing latency and throughput of application workflows on clusters.
Parallel Comput., 2011

ImageMiner: a software system for comparative analysis of tissue microarrays using content-based image retrieval, high-performance computing, and grid technology.
J. Am. Medical Informatics Assoc., 2011

A new steerable pressure force for parametric deformable models.
Proceedings of the Medical Imaging 2011: Image Processing, 2011

A comprehensive framework for classification of nuclei in digital microscopy imaging: An application to diffuse gliomas.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

Morphological signatures and genomic correlates in glioblastoma.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

In silico analysis of nuclei in glioblastoma using large-scale microscopy images improves prediction of treatment response.
Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011

Towards building computerized image analysis framework for nucleus discrimination in microscopy images of diffuse glioma.
Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011

Detection of Conflicts and Inconsistencies in Taxonomy-Based Authorization Policies.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011

2010
An Integrative Approach for In Silico Glioma Research.
IEEE Trans. Biomed. Eng., 2010

Parameterized specification, configuration and execution of data-intensive scientific workflows.
Clust. Comput., 2010

High Performance Computing Techniques for Scaling Image Analysis Workflows.
Proceedings of the Applied Parallel and Scientific Computing, 2010

Texture based image recognition in microscopy images of diffuse gliomas with multi-class gentle boosting mechanism.
Proceedings of the IEEE International Conference on Acoustics, 2010

High-Performance Systems for in Silico Microscopy Imaging Studies.
Proceedings of the Data Integration in the Life Sciences, 7th International Conference, 2010

2009
An Integrated Approach to Locality-Conscious Processor Allocation and Scheduling of Mixed-Parallel Applications.
IEEE Trans. Parallel Distributed Syst., 2009

VirtualPACS - A Federating Gateway to Access Remote Image Data Resources over the Grid.
J. Digit. Imaging, 2009

HPC and Grid Computing for Integrative Biomedical Research.
Int. J. High Perform. Comput. Appl., 2009

Parallel materialization of large ABoxes.
Proceedings of the 2009 ACM Symposium on Applied Computing (SAC), 2009

A caGrid-Enabled, Learning Based Image Segmentation Method for Histopathology Specimens.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

Architectural implications for spatial object association algorithms.
Proceedings of the 23rd IEEE International Symposium on Parallel and Distributed Processing, 2009

An integrated framework for performance-based optimization of scientific workflows.
Proceedings of the 18th ACM International Symposium on High Performance Distributed Computing, 2009

Enabling Data Analysis on High-Throughput Data in Large Data Depository Using Web-Based Analysis Platform - A Case Study on Integrating QUEST with GenePattern in Epigenetics Research.
Proceedings of the 2009 IEEE International Conference on Bioinformatics and Biomedicine, 2009

2008
Large-Scale Biomedical Image Analysis in Grid Environments.
IEEE Trans. Inf. Technol. Biomed., 2008

An imaging workflow for characterizing phenotypical change in large histological mouse model datasets.
J. Biomed. Informatics, 2008

Model Formulation: caGrid 1.0: An Enterprise Grid Infrastructure for Biomedical Research.
J. Am. Medical Informatics Assoc., 2008

Model Formulation: Sharing Data and Analytical Resources Securely in a Biomedical Research Grid Environment.
J. Am. Medical Informatics Assoc., 2008

A Run-time System for Efficient Execution of Scientific Workflows on Distributed Environments.
Int. J. Parallel Program., 2008

e-Science, caGrid, and Translational Biomedical Research.
Computer, 2008

Analysis and Semantic Querying in Large Biomedical Image Datasets.
Computer, 2008

Using overlays for efficient data transfer over shared wide-area networks.
Proceedings of the ACM/IEEE Conference on High Performance Computing, 2008

Translational research design templates, Grid computing, and HPC.
Proceedings of the 22nd IEEE International Symposium on Parallel and Distributed Processing, 2008

Designing and parameterizing a workflow for optimization: A case study in biomedical imaging.
Proceedings of the 22nd IEEE International Symposium on Parallel and Distributed Processing, 2008

A dynamic scheduling approach for coordinated wide-area data transfers using GridFTP.
Proceedings of the 22nd IEEE International Symposium on Parallel and Distributed Processing, 2008

A Duplication Based Algorithm for Optimizing Latency Under Throughput Constraints for Streaming Workflows.
Proceedings of the 2008 International Conference on Parallel Processing, 2008

Multi-hop path splitting and multi-pathing optimizations for data transfers over shared wide-area networks using gridFTP.
Proceedings of the 17th International Symposium on High-Performance Distributed Computing (HPDC-17 2008), 2008

A Roadmap for caGrid, an Enterprise Grid Architecture for Biomedical Research.
Proceedings of the Global Healthgrid: e-Science Meets Biomedical Informatics, 2008

2007
Active semantic caching to optimize multidimensional data analysis in parallel and distributed environments.
Parallel Comput., 2007

Adaptive decomposition and remapping algorithms for object-space-parallel direct volume rendering of unstructured grids.
J. Parallel Distributed Comput., 2007

GridIMAGE: A Novel Use of Grid Computing to Support Interactive Human and Computer-Assisted Detection Decision Support.
J. Digit. Imaging, 2007

Introduce: An Open Source Toolkit for Rapid Development of Strongly Typed Grid Services.
J. Grid Comput., 2007

Parallel four-dimensional Haralick texture analysis for disk-resident image datasets.
Concurr. Comput. Pract. Exp., 2007

Toward terabyte pattern mining: an architecture-conscious solution.
Proceedings of the 12th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, 2007

Knowledge and Cache Conscious Algorithm Design and Systems Support for Data Mining Algorithms.
Proceedings of the 21th International Parallel and Distributed Processing Symposium (IPDPS 2007), 2007

Intelligent Optimization of Parallel and Distributed Applications.
Proceedings of the 21th International Parallel and Distributed Processing Symposium (IPDPS 2007), 2007

Dynamic Data-Driven Systems Approach for Simulation Based Optimizations.
Proceedings of the Computational Science, 2007

Optimizing multiple queries on scientific datasets with partial replicas.
Proceedings of the 8th IEEE/ACM International Conference on Grid Computing (GRID 2007), 2007

Toward Optimizing Latency Under Throughput Constraints for Application Workflows on Clusters.
Proceedings of the Euro-Par 2007, 2007

Scheduling File Transfers for Data-Intensive Jobs on Heterogeneous Clusters.
Proceedings of the Euro-Par 2007, 2007

Performance vs. accuracy trade-offs for large-scale image analysis applications.
Proceedings of the 2007 IEEE International Conference on Cluster Computing, 2007

An Efficient and Reliable Scientific Workflow System.
Proceedings of the Seventh IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2007), 2007

caGrid 1.0: A Grid Enterprise Architecture for Cancer Research.
Proceedings of the AMIA 2007, 2007

The Cancer Biomedical Informatics Grid (caBIG<sup>™</sup>) Security Infrastructure.
Proceedings of the AMIA 2007, 2007

2006
Application of Information Technology: An XML-based System for Synthesis of Data from Disparate Databases.
J. Am. Medical Informatics Assoc., 2006

Supporting Scalable and Distributed Data Subsetting and Aggregation in Large-Scale Seismic Data Analysis.
Int. J. High Perform. Comput. Appl., 2006

Models, methods and middleware for grid-enabled multiphysics oil reservoir management.
Eng. Comput., 2006

caGrid: design and implementation of the core architecture of the cancer biomedical informatics grid.
Bioinform., 2006

Imaging and visual analysis - Large image correction and warping in a cluster environment.
Proceedings of the ACM/IEEE SC2006 Conference on High Performance Networking and Computing, 2006

A Data Locality Aware Online Scheduling Approach for I/O-Intensive Jobs with File Sharing.
Proceedings of the Job Scheduling Strategies for Parallel Processing, 2006

Design and analysis of a multi-dimensional data sampling service for large scale data analysis applications.
Proceedings of the 20th International Parallel and Distributed Processing Symposium (IPDPS 2006), 2006

I/O conscious algorithm design and systems support for data analysis on emerging architectures.
Proceedings of the 20th International Parallel and Distributed Processing Symposium (IPDPS 2006), 2006

Using Space and Attribute Partitioned Partial Replicas for Data Subsetting and Aggregation Queries.
Proceedings of the 2006 International Conference on Parallel Processing (ICPP 2006), 2006

An Integrated Approach for Processor Allocation and Scheduling of Mixed-Parallel Applications.
Proceedings of the 2006 International Conference on Parallel Processing (ICPP 2006), 2006

On Creating Efficient Object-relational Views of Scientific Datasets.
Proceedings of the 2006 International Conference on Parallel Processing (ICPP 2006), 2006

Towards Dynamic Data-Driven Management of the Ruby Gulch Waste Repository.
Proceedings of the Computational Science, 2006

Task Scheduling and File Replication for Data-Intensive Jobs with Batch-shared I/O.
Proceedings of the 15th IEEE International Symposium on High Performance Distributed Computing, 2006

Service-Based Access to and Processing of Large Scientific Datasets.
Proceedings of the High Performance Computing and Grids in Action, 2006

Locality Conscious Processor Allocation and Scheduling for Mixed Parallel Applications.
Proceedings of the 2006 IEEE International Conference on Cluster Computing, 2006

TRIPS and TIDES: new algorithms for tree mining.
Proceedings of the 2006 ACM CIKM International Conference on Information and Knowledge Management, 2006

Dorian: Grid Service Infrastructure for Identity Management and Federation.
Proceedings of the 19th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2006), 2006

2005
XML database support for distributed execution of data-intensive scientific workflows.
SIGMOD Rec., 2005

Application of Information Technology: A Grid-Based Image Archival and Analysis System.
J. Am. Medical Informatics Assoc., 2005

Application of Grid-enabled technologies for solving optimization problems in data-driven reservoir studies.
Future Gener. Comput. Syst., 2005

A simulation and data analysis system for large-scale, data-driven oil reservoir simulation studies.
Concurr. Pract. Exp., 2005

Grid-based management of biomedical data using an XML-based distributed data management system.
Proceedings of the 2005 ACM Symposium on Applied Computing (SAC), 2005

Supporting Large Scale Medical and Scientific Datasets.
Proceedings of the Parallel Computing: Current & Future Issues of High-End Computing, 2005

A Services Oriented Framework for Next Generation Data Analysis Centers.
Proceedings of the 19th International Parallel and Distributed Processing Symposium (IPDPS 2005), 2005

Design of a next generation sampling service for large scale data analysis applications.
Proceedings of the 19th Annual International Conference on Supercomputing, 2005

Towards Dynamic Data-Driven Optimization of Oil Well Placement.
Proceedings of the Computational Science, 2005

Servicing Seismic and Oil Reservoir Simulation Data Through Grid Data Services.
Proceedings of the Data Management in Grids, First VLDB Workshop, 2005

Distributed Out-of-Core Preprocessing of Very Large Microscopy Images for Efficient Querying.
Proceedings of the 2005 IEEE International Conference on Cluster Computing (CLUSTER 2005), September 26, 2005

Servicing range queries on multidimensional datasets with partial replicas.
Proceedings of the 5th International Symposium on Cluster Computing and the Grid (CCGrid 2005), 2005

A hypergraph partitioning based approach for scheduling of tasks with batch-shared I/O.
Proceedings of the 5th International Symposium on Cluster Computing and the Grid (CCGrid 2005), 2005

2004
Optimizing the Execution of Multiple Data Analysis Queries on Parallel and Distributed Environments.
IEEE Trans. Parallel Distributed Syst., 2004

A Parallel Implementation of 4-Dimensional Haralick Texture Analysis for Disk-Resident Image Datasets.
Proceedings of the ACM/IEEE SC2004 Conference on High Performance Networking and Computing, 2004

Application of Grid-Enabled Technologies for Solving Optimization Problems in Data-Driven Reservoir Studies.
Proceedings of the Computational Science, 2004

Strategies for Using Additional Resources in Parallel Hash-Based Join Algorithms.
Proceedings of the 13th International Symposium on High-Performance Distributed Computing (HPDC-13 2004), 2004

An Approach for Automatic Data Virtualization.
Proceedings of the 13th International Symposium on High-Performance Distributed Computing (HPDC-13 2004), 2004

Tools for efficient subsetting and pipelined processing of large scale, distributed biomedical image data.
Proceedings of the Grid Computing: The New Frontier of High Performance Computing [post-proceedings of the High Performance Computing Workshop, 2004

Use of PVFS for Efficient Execution of Jobs with Pipeline-Shared I/O.
Proceedings of the 5th International Workshop on Grid Computing (GRID 2004), 2004

A distributed data management middleware for data-driven application systems.
Proceedings of the 2004 IEEE International Conference on Cluster Computing (CLUSTER 2004), 2004

Serving queries to multi-resolution datasets on disk-based storage clusters.
Proceedings of the 4th IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGrid 2004), 2004

2003
The virtual microscope.
IEEE Trans. Inf. Technol. Biomed., 2003

Database Support for Data-Driven Scientific Applications in the Grid.
Parallel Process. Lett., 2003

Optimizing Reduction Computations In a Distributed Environment.
Proceedings of the ACM/IEEE SC2003 Conference on High Performance Networking and Computing, 2003

A Component-based Implementation of Multiple Sequence Alignment.
Proceedings of the 2003 ACM Symposium on Applied Computing (SAC), 2003

Efficient Execution of Multi-query Data Analysis Batches Using Compiler Optimization Strategies.
Proceedings of the Languages and Compilers for Parallel Computing, 2003

Exploiting Functional Decomposition for Efficient Parallel Processing of Multiple Data Analysis Queries.
Proceedings of the 17th International Parallel and Distributed Processing Symposium (IPDPS 2003), 2003


Adaptive Polling of Grid Resource Monitors Using a Slacker Coherence Model.
Proceedings of the 12th International Symposium on High-Performance Distributed Computing (HPDC-12 2003), 2003

Impact of High Performance Sockets on Data Intensive Applications.
Proceedings of the 12th International Symposium on High-Performance Distributed Computing (HPDC-12 2003), 2003

Applying Database Support for Large Scale Data Driven Science in Distributed Environments.
Proceedings of the 4th International Workshop on Grid Computing (GRID 2003), 2003

A Slacker Coherence rotocol for Pull-based Monitoring of On-line Data Source.
Proceedings of the 3rd IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2003), 2003

Image Processing or the Grid: A Toolkit or Building Grid-enabled Image Processing Applications.
Proceedings of the 3rd IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2003), 2003

2002
Processing large-scale multi-dimensional data in parallel and distributed environments.
Parallel Comput., 2002

Optimizing execution of component-based applications using group instances.
Future Gener. Comput. Syst., 2002

Executing multiple pipelined data analysis operations in the grid.
Proceedings of the 2002 ACM/IEEE conference on Supercomputing, 2002

Active Proxy-G: optimizing the query execution process in the grid.
Proceedings of the 2002 ACM/IEEE conference on Supercomputing, 2002

Improving Performance of Multiple Sequence Alignment Analysis in Multi-Client Environments.
Proceedings of the 16th International Parallel and Distributed Processing Symposium (IPDPS 2002), 2002

Efficient Manipulation of Large Datasets on Heterogeneous Storage Systems.
Proceedings of the 16th International Parallel and Distributed Processing Symposium (IPDPS 2002), 2002

Scheduling Multiple Data Visualization Query Workloads on a Shared Memory Machine.
Proceedings of the 16th International Parallel and Distributed Processing Symposium (IPDPS 2002), 2002

Multiple Query Optimization for Data Analysis Applications on Clusters of SMPs.
Proceedings of the 2nd IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2002), 2002

2001
Distributed processing of very large datasets with DataCutter.
Parallel Comput., 2001

Visualization of Large Data Sets with the Active Data Repository.
IEEE Computer Graphics and Applications, 2001

Efficient execution of multiple query workloads in data analysis applications.
Proceedings of the 2001 ACM/IEEE conference on Supercomputing, 2001

A Hypergraph-Based Workload Partitioning Strategy for Parallel Data Aggregation.
Proceedings of the Tenth SIAM Conference on Parallel Processing for Scientific Computing, 2001

Performance Optimization for Data Intensive Grid Applications.
Proceedings of the 3rd Annual International Workshop on Active Middleware Services (AMS 2001), 2001

2000
Image-Space Decomposition Algorithms for Sort-First Parallel Volume Rendering of Unstructured Grids.
J. Supercomput., 2000

Efficient Performance Prediction for Large-Scale, Data-Intensive Applications.
Int. J. High Perform. Comput. Appl., 2000

DataCutter: Middleware for Filtering Very Large Scientific Datasets on Archival Storage Systems.
Proceedings of the Eighth NASA Goddard Space Flight Center Conference on Mass Storage Systems and Technologies in cooperation with Seventeenth IEEE Symposium on Mass Storage Systems, 2000

Optimizing Retrieval and Processing of Multi-Dimensional Scientific Datasets.
Proceedings of the 14th International Parallel & Distributed Processing Symposium (IPDPS'00), 2000

Design of a Framework for Data-Intensive Wide-Area Applications.
Proceedings of the 9th Heterogeneous Computing Workshop, 2000

1999
Object-Relational Queries into Multidimensional Databases with the Active Data Repository.
Parallel Process. Lett., 1999

Querying Very Large Multi-dimensional Datasets in ADR.
Proceedings of the ACM/IEEE Conference on Supercomputing, 1999

Coupling Multiple Simulations via a High Performance Customizable Database System.
Proceedings of the Ninth SIAM Conference on Parallel Processing for Scientific Computing, 1999

A High-Performance Database System for Managing Large Multi-resolution Medical Images.
Proceedings of the AMIA 1999, 1999

1998
Object-space parallel polygon rendering on hypercubes.
Comput. Graph., 1998

A Performance Prediction Framework for Data Intensive Applications on Large Scale Parallel Machines.
Proceedings of the Languages, 1998

1997
Pararllel rendering algorithms for distributed-memory multicomputers (Çok işlemcili dağıtık hafızalı bilgisayarlarda paralel görüntüleme algoritmaları)
PhD thesis, 1997

A parallel scaled conjugate-gradient algorithm for the solution phase of gathering radiosity on hypercubes.
Vis. Comput., 1997

A Comparison of Spatial Subdivision Algorithms for Sort-First Rendering.
Proceedings of the High-Performance Computing and Networking, 1997

1996
Active Pixel Merging on Hypercube Multicomputers.
Proceedings of the High-Performance Computing and Networking, 1996

1995
Comparison of Two Image-Space Subdivision Algorithms for Direct Volume Rendering on Distributed-Memory Multicomputers.
Proceedings of the Applied Parallel Computing, 1995

1991
Efficient Parallel Maze Routing Algorithms on a Hypercube Multicomputer.
Proceedings of the International Conference on Parallel Processing, 1991

Parallelization of Lee's Routing Algorithm on a Hypercube Multicomputer.
Proceedings of the Distributed Memory Computing, 2nd European Conference, 1991


  Loading...