Sverker Holmgren

According to our database, Sverker Holmgren authored at least 43 papers between 1994 and 2017.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2017

A Flexible Computational Framework Using R and Map-Reduce for Permutation Tests of Massive Genetic Analysis of Complex Traits.

Behrang Mahjani, Salman Zubair Toor, Carl Nettelblad, Sverker Holmgren

IEEE ACM Trans. Comput. Biol. Bioinform., 2017

Multidimensional Performance and Scalability Analysis for Diverse Applications Based on System Monitoring Data.

Maya G. Neytcheva, Sverker Holmgren, Jonathan R. Bull, Ali Dorostkar, Anastasia Kruchinina, Dmitry A. Nikitenko, Nina Popova, Pavel A. Shvets, Alexey M. Teplov, Vadim V. Voevodin, Vladimir V. Voevodin

Proceedings of the Parallel Processing and Applied Mathematics, 2017

2014

Dynamic Autotuning of Adaptive Fast Multipole Methods on Hybrid Multicore CPU and GPU Systems.

Marcus Holm, Stefan Engblom, Anders Goude, Sverker Holmgren

SIAM J. Sci. Comput., 2014

Impact of Code Refactoring Using Object-Oriented Methodology on a Scientific Computing Application.

Malin Källén, Sverker Holmgren, Ebba Þóra Hvannberg

Proceedings of the 14th IEEE International Working Conference on Source Code Analysis and Manipulation, 2014

2013

Fast and Accurate Detection of Multiple Quantitative Trait Loci.

Carl Nettelblad, Behrang Mahjani, Sverker Holmgren

J. Comput. Biol., 2013

Preface.

Erwin Laure, Sverker Holmgren

Future Gener. Comput. Syst., 2013

Dynamic autotuning of adaptive fast multipole methods on hybrid multicore CPU \& GPU systems.

Marcus Holm, Stefan Engblom, Anders Goude, Sverker Holmgren

CoRR, 2013

Scientific Analysis by Queries in Extended SPARQL over a Scalable e-Science Data Store.

Andrej Andrejev, Salman Zubair Toor, Andreas Hellander, Sverker Holmgren, Tore Risch

Proceedings of the 9th IEEE International Conference on eScience, 2013

2012

Investigating an Open Source Cloud Storage Infrastructure for CERN-specific Data Analysis.

Salman Zubair Toor, Rainer Töebbicke, Maitane Zotes Resines, Sverker Holmgren

Proceedings of the Seventh IEEE International Conference on Networking, 2012

Reducing Complexity in Management of eScience Computations.

Per-Olov Östberg, Andreas Hellander, Brian Drawert, Erik Elmroth, Sverker Holmgren, Linda R. Petzold

Proceedings of the 12th IEEE/ACM International Symposium on Cluster, 2012

Abstractions for Scaling eScience Applications to Distributed Computing Environments - A StratUm Integration Case Study in Molecular Systems Biology.

Per-Olov Östberg, Andreas Hellander, Brian Drawert, Erik Elmroth, Sverker Holmgren, Linda R. Petzold

Proceedings of the BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1, 2012

2011

Global error control of the time-propagation for the Schrödinger equation with a time-dependent Hamiltonian.

Katharina Kormann, Sverker Holmgren, Hans O. Karlsson

J. Comput. Sci., 2011

Using Hardware Transactional Memory for High-Performance Computing.

Karl Ljungkvist, Martin Tillenius, David Black-Schaffer, Sverker Holmgren, Martin Karlsson, Elisabeth Larsson

Proceedings of the 25th IEEE International Symposium on Parallel and Distributed Processing, 2011

A Scalable Architecture for e-Science Data Management.

Salman Zubair Toor, Manivasakan Sabesan, Sverker Holmgren, Tore Risch

Proceedings of the IEEE 7th International Conference on E-Science, 2011

2010

A Fourier-Coefficient Based Solution of an Optimal Control Problem in Quantum Chemistry.

Katharina Kormann, Sverker Holmgren, Hans O. Karlsson

J. Optim. Theory Appl., 2010

Assessing a multiple QTL search using the variance component model.

Kateryna Mishchenko, Lars Rönnegård, Sverker Holmgren, Volodymyr Mishchenko

Comput. Biol. Chem., 2010

Efficiently Implementing Monte Carlo Electrostatics Simulations on Multicore Accelerators.

Marcus Holm, Sverker Holmgren

Proceedings of the Applied Parallel and Scientific Computing, 2010

Communication-Efficient Algorithms for Numerical Quantum Dynamics.

Magnus Gustafsson, Katharina Kormann, Sverker Holmgren

Proceedings of the Applied Parallel and Scientific Computing, 2010

A Grid-Enabled Problem Solving Environment for QTL Analysis in R.

Mahen Jayawardena, Carl Nettelblad, Salman Zubair Toor, Per-Olov Östberg, Erik Elmroth, Sverker Holmgren

Proceedings of the ISCA 2nd International Conference on Bioinformatics and Computational Biology, 2010

2009

Reconsidering algorithms for iterative solvers in the multicore era.

Dan Wallin, Henrik Löf, Erik Hagersten, Sverker Holmgren

Int. J. Comput. Sci. Eng., 2009

cnF2freq: Efficient Determination of Genotype and Haplotype Probabilities in Outbred Populations Using Markov Models.

Carl Nettelblad, Sverker Holmgren, Lucy Crooks, Örjan Carlborg

Proceedings of the Bioinformatics and Computational Biology, 2009

2008

Newton-type methods for REML estimation in genetic analysis of quantitative traits.

Kateryna Mishchenko, Sverker Holmgren, Lars Rönnegård

J. Comput. Methods Sci. Eng., 2008

2007

Discrete Fundamental Solution Preconditioning for Hyperbolic Systems of PDE.

Henrik Brandén, Sverker Holmgren, Per Sundqvist

J. Sci. Comput., 2007

Dynamic Data Migration for Structured AMR Solvers.

Markus Nordén, Henrik Löf, Jarmo Rantakokko, Sverker Holmgren

Int. J. Parallel Program., 2007

Grid-Enabling an Efficient Algorithm for Demanding Global Optimization Problems in Genetic Analysis.

Mahen Jayawardena, Sverker Holmgren

Proceedings of the Third International Conference on e-Science and Grid Computing, 2007

2006

OpenMP versus MPI for PDE solvers based on regular sparse numerical operators.

Markus Nordén, Sverker Holmgren, Michael Thuné

Future Gener. Comput. Syst., 2006

Bioinformatics and Computational Biology: Minisymposium Abstract.

Ann-Charlotte Berglund Sonnhammer, Sverker Holmgren

Proceedings of the Applied Parallel Computing. State of the Art in Scientific Computing, 2006

Using Parallel Computing and Grid Systems for Genetic Mapping of Quantitative Traits.

Mahen Jayawardena, Kajsa Ljungberg, Sverker Holmgren

Proceedings of the Applied Parallel Computing. State of the Art in Scientific Computing, 2006

Geographical Locality and Dynamic Data Migration for OpenMP Implementations of Adaptive PDE Solvers.

Markus Nordén, Henrik Löf, Jarmo Rantakokko, Sverker Holmgren

Proceedings of the OpenMP Shared Memory Parallel Programming - International Workshops, 2006

Multigrid and Gauss-Seidel smoothers revisited: parallelization on chip multiprocessors.

Dan Wallin, Henrik Löf, Erik Hagersten, Sverker Holmgren

Proceedings of the 20th Annual International Conference on Supercomputing, 2006

2005

affinity-on-next-touch: increasing the performance of an industrial PDE solver on a cc-NUMA system.

Henrik Löf, Sverker Holmgren

Proceedings of the 19th Annual International Conference on Supercomputing, 2005

2004

Simultaneous search for multiple QTL using the global optimization algorithm DIRECT.

Kajsa Ljungberg, Sverker Holmgren, Örjan Carlborg

Bioinform., 2004

Analyzing Advanced PDE Solvers Through Simulation.

Henrik Johansson, Dan Wallin, Sverker Holmgren

Proceedings of the Applied Parallel Computing, 2004

Improving Geographical Locality of Data for Shared Memory Implementations of PDE Solvers.

Henrik Löf, Markus Nordén, Sverker Holmgren

Proceedings of the Computational Science, 2004

2003

The Swedish National Graduate School in Scientific Computing (NGSSC).

Sverker Holmgren, Anders Ynnerman

Future Gener. Comput. Syst., 2003

Cache Memory Behavior of Advanced PDE Solvers.

Dan Wallin, Henrik Johansson, Sverker Holmgren

Proceedings of the Parallel Computing: Software Technology, 2003

2002

Performance of PDE solvers on a self-optimizing NUMA architecture.

Sverker Holmgren, Markus Nordén, Jarmo Rantakokko, Dan Wallin

Parallel Algorithms Appl., 2002

Efficient Algorithms for Quantitative Trait Loci Mapping Problems.

Kajsa Ljungberg, Sverker Holmgren, Örjan Carlborg

J. Comput. Biol., 2002

2001

Performance of High-Accuracy PDE Solvers on a Self-Optimizing NUMA Architecture.

Sverker Holmgren, Dan Wallin

Proceedings of the Euro-Par 2001: Parallel Processing, 2001

1999

Convergence Acceleration for the Linearized Navier-Stokes Equations using Semicirculant Approximations.

Sverker Holmgren, Henrik Brandén, Erik Sterner

SIAM J. Sci. Comput., 1999

Convergence Acceleration for Hyperbolic Systems Using Semicirculant Approximations.

Henrik Brandén, Sverker Holmgren

J. Sci. Comput., 1999

1996

Semicirculant Solvers and Boundary Corrections for First-Order Partial Differential Equations.

Sverker Holmgren, Kurt Otto

SIAM J. Sci. Comput., 1996

1994

Semicirculant Preconditioners for First-Order Partial Differential Equations.

Sverker Holmgren, Kurt Otto

SIAM J. Sci. Comput., 1994