Suzanne Sindi
Orcid: 0000-0003-2742-4332
According to our database1,
Suzanne Sindi
authored at least 35 papers
between 2007 and 2024.
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Book In proceedings Article PhD thesis Dataset OtherLinks
Online presence:
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on sindilab.com
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on orcid.org
On csauthors.net:
Bibliography
2024
Sparse Negative Binomial Signal Recovery for Genomic Variant Prediction in Diploid Species.
Proceedings of the 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2024
2023
Inferring gene regulatory networks using transcriptional profiles as dynamical attractors.
PLoS Comput. Biol., 2023
Genetic Variant Detection Over Generations: Sparsity-Constrained Optimization Using Block-Coordinate Descent.
Proceedings of the IEEE International Symposium on Medical Measurements and Applications, 2023
2022
A structured model and likelihood approach to estimate yeast prion propagon replication rates and their asymmetric transmission.
PLoS Comput. Biol., 2022
Conservative finite volume method on deforming geometries: The case of protein aggregation in dividing yeast cells.
J. Comput. Phys., 2022
N-ACT: An Interpretable Deep Learning Model for Automatic Cell Type and Salient Gene Identification.
CoRR, 2022
<i>ACTIVA</i>: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective variational autoencoders.
Bioinform., 2022
2021
Novel structural variant genome detection in extended pedigrees through negative binomial optimization.
Proceedings of the 55th Asilomar Conference on Signals, Systems, and Computers, 2021
2020
A unifying model for the propagation of prion proteins in yeast brings insight into the [PSI+] prion.
PLoS Comput. Biol., 2020
Proceedings of the 28th European Signal Processing Conference, 2020
Related Inference: A Supervised Learning Approach to Detect Signal Variation in Genome Data.
Proceedings of the 28th European Signal Processing Conference, 2020
Proceedings of the Asia-Pacific Signal and Information Processing Association Annual Summit and Conference, 2020
Proceedings of the 54th Asilomar Conference on Signals, Systems, and Computers, 2020
2019
Proceedings of the IEEE International Symposium on Medical Measurements and Applications, 2019
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
2018
Negative Binomial Optimization for Biomedical Structural Variant Signal Reconstruction.
Proceedings of the 2018 IEEE International Conference on Acoustics, 2018
Structural Variant Prediction in Extended Pedigrees Through Sparse Negative Binomial Genome Signal Recovery.
Proceedings of the 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2018
Detecting Novel Structural Variants In Genomes By Leveraging Parent-Child Relatedness.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
2017
Proceedings of the 2017 IEEE International Symposium on Medical Measurements and Applications, 2017
Proceedings of the 2017 IEEE International Symposium on Medical Measurements and Applications, 2017
2016
On analytical and numerical approaches to division and label structured population models.
Appl. Math. Lett., 2016
Sparse genomic structural variant detection: Exploiting parent-child relatedness for signal recovery.
Proceedings of the IEEE Statistical Signal Processing Workshop, 2016
Sparse signal recovery methods for variant detection in next-generation sequencing data.
Proceedings of the 2016 IEEE International Conference on Acoustics, 2016
Constrained variant detection with SPaRC: Sparsity, parental relatedness, and coverage.
Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016
2015
Appl. Math. Lett., 2015
2014
J. Appl. Probab., 2014
Characterization of structural variants with single molecule and hybrid sequencing approaches.
Bioinform., 2014
2012
2011
Workshop: Characterization of structural variants with next generation DNA sequencing.
Proceedings of the IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, 2011
2010
Identification and Frequency Estimation of Inversion Polymorphisms from Haplotype Data.
J. Comput. Biol., 2010
2009
Bioinform., 2009
2007
Briefings Bioinform., 2007