Sunyang Fu

Orcid: 0000-0003-1691-5179

According to our database1, Sunyang Fu authored at least 58 papers between 2015 and 2024.

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Bibliography

2024
Characterizing the progression from mild cognitive impairment to dementia: a network analysis of longitudinal clinical visits.
BMC Medical Informatics Decis. Mak., December, 2024

A framework for human evaluation of large language models in healthcare derived from literature review.
npj Digit. Medicine, 2024

FedFSA: Hybrid and federated framework for functional status ascertainment across institutions.
J. Biomed. Informatics, 2024

Automatic uncovering of patient primary concerns in portal messages using a fusion framework of pretrained language models.
J. Am. Medical Informatics Assoc., 2024

A taxonomy for advancing systematic error analysis in multi-site electronic health record-based clinical concept extraction.
J. Am. Medical Informatics Assoc., 2024

Stratifying heart failure patients with graph neural network and transformer using Electronic Health Records to optimize drug response prediction.
J. Am. Medical Informatics Assoc., 2024

A Literature Review and Framework for Human Evaluation of Generative Large Language Models in Healthcare.
CoRR, 2024

Wonder at Chemotimelines 2024: MedTimeline: An End-to-End NLP System for Timeline Extraction from Clinical Narratives.
Proceedings of the 6th Clinical Natural Language Processing Workshop, 2024

2023
An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C).
J. Am. Medical Informatics Assoc., November, 2023

Systematic design and data-driven evaluation of social determinants of health ontology (SDoHO).
J. Am. Medical Informatics Assoc., August, 2023

The IMPACT framework and implementation for accessible in silico clinical phenotyping in the digital era.
npj Digit. Medicine, 2023

BiomedGPT: A Unified and Generalist Biomedical Generative Pre-trained Transformer for Vision, Language, and Multimodal Tasks.
CoRR, 2023

Detecting Reddit Users with Depression Using a Hybrid Neural Network.
CoRR, 2023

Dementia Prediction in Older Adults Using Sex-Specific Health Trajectory Clustering.
Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

Classification of Patient Portal Messages with BERT-based Language Models.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

Identifying Major Depressive Disorder From Clinical Notes Using Neural Language Models with Distant Supervision.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

Detecting Reddit Users with Depression Using a Hybrid Neural Network SBERT-CNN.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

Harnessing Transfer Learning for Dementia Prediction: Leveraging Sex-Different Mild Cognitive Impairment Prognosis.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022
Computational drug repurposing based on electronic health records: a scoping review.
npj Digit. Medicine, 2022

Real-time risk prediction of colorectal surgery-related post-surgical complications using GRU-D model.
J. Biomed. Informatics, 2022

A hybrid model to identify fall occurrence from electronic health records.
Int. J. Medical Informatics, 2022

Quality assessment of functional status documentation in EHRs across different healthcare institutions.
Frontiers Digit. Health, 2022

Systematic Design and Evaluation of Social Determinants of Health Ontology (SDoHO).
CoRR, 2022

MedTator: a serverless annotation tool for corpus development.
Bioinform., 2022

BETA: a comprehensive benchmark for computational drug-target prediction.
Briefings Bioinform., 2022

Evaluation of mCODE Coverage in EHR: a Scoping Review of Cancer Natural Language Processing.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Evaluation of Document-Level Identification of Pulmonary Nodules in Radiology Reports Using FLAIR Natural Language Processing Framework.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Aspect-based Sentiment Analysis of Radiology Patient Experience Surveys: A Cohort Study.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Detection of Dementia Signals from Longitudinal Clinical Visits Using One-Class Classification.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

MedTator: A Serverless Web-based Tool for Corpus Annotation.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Probing Radiology Patient Experience Feedbacks with Aspect-based Sentiment Analysis.
Proceedings of the AMIA 2022, 2022

Towards User-centered Corpus Development: Lessons Learnt from Designing and Developing MedTator.
Proceedings of the AMIA 2022, 2022

Quality Assessment of Functional Status Documentation in EHR Across Institutions.
Proceedings of the AMIA 2022, 2022

2021
An aberration detection-based approach for sentinel syndromic surveillance of COVID-19 and other novel influenza-like illnesses.
J. Biomed. Informatics, 2021

An Open Natural Language Processing Development Framework for EHR-based Clinical Research: A case demonstration using the National COVID Cohort Collaborative (N3C).
CoRR, 2021

Neural Language Models with Distant Supervision to Identify Major Depressive Disorder from Clinical Notes.
CoRR, 2021

The Implication of Latent Information Quality to the Reproducibility of Secondary Use of Electronic Health Records.
Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

Prediction of Incident Dementia Using Patient Temporal Health Status.
Proceedings of the MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation, 2021

Early Alert of Elderly Cognitive Impairment using Temporal Streaming Clustering.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

Deep Learning Approaches for Breast Cancer Characteristics Extraction from Electronic Health Records.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Detecting Major Depressive Disorder from Clinical Notes using Neural Language Models with Distant Supervision.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020
Assessment of the impact of EHR heterogeneity for clinical research through a case study of silent brain infarction.
BMC Medical Informatics Decis. Mak., 2020

MedSTS: a resource for clinical semantic textual similarity.
Lang. Resour. Evaluation, 2020

Clinical concept extraction: A methodology review.
J. Biomed. Informatics, 2020

DeepTKAClassifier: Brand Classification of Total Knee Arthroplasty Implants Using Explainable Deep Convolutional Neural Networks.
Proceedings of the Advances in Visual Computing - 15th International Symposium, 2020

Extracting Patient Genetic Information from Unstructured Clinical Notes.
Proceedings of the AMIA 2020, 2020

Accelerating Development of Learning Healthcare Systems via Distantly Supervised Knowledge Discovery.
Proceedings of the AMIA 2020, 2020

Big Impact from Small Data: Unsupervised Machine Learning Approaches for Chronic Pain Patient Subgrouping.
Proceedings of the AMIA 2020, 2020

Annotating Chronic Pain Episodes in EHR Text: Guideline Development and Corpus Analysis.
Proceedings of the AMIA 2020, 2020

Predicting Section Location of Clinical Sentences using BERT Encoder - A Pilot Study.
Proceedings of the AMIA 2020, 2020

2019
Desiderata for delivering NLP to accelerate healthcare AI advancement and a Mayo Clinic NLP-as-a-service implementation.
npj Digit. Medicine, 2019

Development of Clinical Concept Extraction Applications: A Methodology Review.
CoRR, 2019

How Good is Artificial Intelligence at Automatically Answering Consumer Questions Related to Alzheimer's Disease?
CoRR, 2019

Artificial intelligence to organize patient portal messages: a journey from an ensemble deep learning text classification to rule-based named entity recognition.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2018
BioCreative/OHNLP Challenge 2018.
Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018

Supervised Learning Approach to Link Prediction in FDA Adverse Event Reporting System (FAERS) Database Network.
Proceedings of the AMIA 2018, 2018

Natural Language Processing for the Identification of Silent Brain Infractions from Neuroimaging Reports.
Proceedings of the AMIA 2018, 2018

2015
Early Prediction of Movie Success - What, Who, and When.
Proceedings of the Social Computing, Behavioral-Cultural Modeling, and Prediction, 2015


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