Stuart Owen

According to our database, Stuart Owen authored at least 23 papers between 2008 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

WorkflowHub: a registry for computational workflows.

Johan Gustafsson, Sean R. Wilkinson, Finn Bacall, Luca Pireddu, Stian Soiland-Reyes, Simone Leo, Stuart Owen, Nick S. Juty, José María Fernández, Björn A. Grüning, Tom Brown, Hervé Ménager, Salvador Capella-Gutiérrez, Frederik Coppens, Carole A. Goble

CoRR, 2024

2023

The EOSC-Life Workflow Collaboratory for the Life Sciences.

Carole A. Goble, Finn Bacall, Stian Soiland-Reyes, Stuart Owen, Ignacio Eguinoa, Bert Droesbeke, Hervé Ménager, Laura Rodríguez-Navas, José María Fernández, Björn A. Grüning, Simone Leo, Luca Pireddu, Michael R. Crusoe, Johan Gustafsson, Salvador Capella-Gutiérrez, Frederik Coppens

Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023

2022

Ten simple rules for making a software tool workflow-ready.

Paul Brack, Peter Crowther, Stian Soiland-Reyes, Stuart Owen, Douglas Lowe, Alan R. Williams, Quentin Groom, Mathias Dillen, Frederik Coppens, Björn A. Grüning, Ignacio Eguinoa, Philip Ewels, Carole A. Goble

PLoS Comput. Biol., 2022

The Specimen Data Refinery: A Canonical Workflow Framework and FAIR Digital Object Approach to Speeding up Digital Mobilisation of Natural History Collections.

Alex R. Hardisty, Paul Brack, Carole A. Goble, Laurence Livermore, Ben Scott, Quentin Groom, Stuart Owen, Stian Soiland-Reyes

Data Intell., 2022

2017

FAIRDOMHub: a repository and collaboration environment for sharing systems biology research.

Katherine Wolstencroft, Olga Krebs, Jacky L. Snoep, Natalie J. Stanford, Finn Bacall, Martin Golebiewski, Rostyk Kuzyakiv, Quyen Nguyen, Stuart Owen, Stian Soiland-Reyes, Jakub Straszewski, David D. van Niekerk, Alan R. Williams, Lars Malmström, Bernd Rinn, Wolfgang Müller, Carole A. Goble

Nucleic Acids Res., 2017

2016

FAIRDOM approach for semantic interoperability of systems biology data and models.

Olga Krebs, Katy Wolstencroft, Natalie J. Stanford, Norman Morrison, Martin Golebiewski, Rostyk Kuzyakiv, Stuart Owen, Quyen Nguyen, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble

Proceedings of the 7th Workshop on Ontologies and Data in Life Sciences, 2016

2015

SEEK: a systems biology data and model management platform.

Katherine Wolstencroft, Stuart Owen, Olga Krebs, Quyen Nguyen, Natalie J. Stanford, Martin Golebiewski, Andreas Weidemann, Meik Bittkowski, Lihua An, David Shockley, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble

BMC Syst. Biol., 2015

FAIRDOM approach for semantic interoperability of systems biology data and models.

Olga Krebs, Katy Wolstencroft, Natalie J. Stanford, Norman Morrison, Martin Golebiewski, Stuart Owen, Quyen Nguyen, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble

Proceedings of the International Conference on Biomedical Ontology, 2015

2013

The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud.

Katherine Wolstencroft, Robert Haines, Donal Fellows, Alan R. Williams, David Withers, Stuart Owen, Stian Soiland-Reyes, Ian Dunlop, Aleksandra Nenadic, Paul Fisher, Jiten Bhagat, Khalid Belhajjame, Finn Bacall, Alex R. Hardisty, Abraham Nieva de la Hidalga, Maria P. Balcazar Vargas, Shoaib Sufi, Carole A. Goble

Nucleic Acids Res., 2013

Why linked data is not enough for scientists.

Sean Bechhofer, Iain E. Buchan, David De Roure, Paolo Missier, John D. Ainsworth, Jiten Bhagat, Philip A. Couch, Don Cruickshank, Mark Delderfield, Ian Dunlop, Matthew Gamble, Danius T. Michaelides, Stuart Owen, David R. Newman, Shoaib Sufi, Carole A. Goble

Future Gener. Comput. Syst., 2013

Stealthy annotation of experimental biology by spreadsheets.

Katherine Wolstencroft, Stuart Owen, Matthew Horridge, Simon Jupp, Olga Krebs, Jacky L. Snoep, Franco B. du Preez, Wolfgang Müller, Robert Stevens, Carole A. Goble

Concurr. Comput. Pract. Exp., 2013

Semantic Data and Models Sharing in Systems Biology: The Just Enough Results Model and the SEEK Platform.

Katherine Wolstencroft, Stuart Owen, Olga Krebs, Wolfgang Müller, Quyen Nguyen, Jacky L. Snoep, Carole A. Goble

Proceedings of the Semantic Web - ISWC 2013, 2013

2012

Populous: a tool for building OWL ontologies from templates.

Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Katy Wolstencroft, Robert Stevens

BMC Bioinform., 2012

RightField: Scientific Knowledge Acquisition by Stealth through Ontology-Enabled Spreadsheets.

Katy Wolstencroft, Stuart Owen, Matthew Horridge, Wolfgang Müller, Finn Bacall, Jacky L. Snoep, Franco B. du Preez, Quyen Nguyen, Olga Krebs, Carole A. Goble

Proceedings of the Knowledge Engineering and Knowledge Management, 2012

RightField: Semantic enrichment of Systems Biology data using spreadsheets.

Katherine Wolstencroft, Stuart Owen, Carole A. Goble, Quyen Nguyen, Olga Krebs, Wolfgang Müller

Proceedings of the 8th IEEE International Conference on E-Science, 2012

2011

RightField: embedding ontology annotation in spreadsheets.

Katy Wolstencroft, Stuart Owen, Matthew Horridge, Olga Krebs, Wolfgang Müller, Jacky L. Snoep, Franco B. du Preez, Carole A. Goble

Bioinform., 2011

Populous: A Tool for Populating an Ontology.

Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Katy Wolstencroft, Robert Stevens

Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

2010

Populous: A tool for populating ontology templates

Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Robert Stevens, Katy Wolstencroft

CoRR, 2010

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows.

Toshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita, Yasunori Yamamoto, Atsuko Yamaguchi, Shuichi Kawashima, Hong-Woo Chun, Jan Aerts, Bruno Aranda, Lord H. Barboza, Raoul Jean Pierre Bonnal, Richard M. Bruskiewich, Jan Christian Bryne, José María Fernández, Akira Funahashi, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge, Richard C. G. Holland, Yoshinobu Kano, Edward A. Kawas, Arnaud Kerhornou, Eri Kibukawa, Akira R. Kinjo, Michael Kuhn, Hilmar Lapp, Heikki Lehväslaiho, Hiroyuki Nakamura, Yasukazu Nakamura, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins, René Ranzinger, Florian Reisinger, Lukasz Salwínski, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles, Rutger A. Vos, Mark D. Wilkinson, William S. York, Christian M. Zmasek, Kiyoshi Asai, Toshihisa Takagi

J. Biomed. Semant., 2010

Populous: A Tool for Populating Templates for OWL Ontologies.

Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Robert Stevens, Katy Wolstencroft

Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, 2010

Taverna, Reloaded.

Paolo Missier, Stian Soiland-Reyes, Stuart Owen, Wei Tan, Aleksandra Nenadic, Ian Dunlop, Alan R. Williams, Tom Oinn, Carole A. Goble

Proceedings of the Scientific and Statistical Database Management, 2010

Rightfield: Embedding Ontology Term Selection into Spreadsheets for the Annotation of Biological Data.

Katy Wolstencroft, Matthew Horridge, Stuart Owen, Wolfgang Müller, Finn Bacall, Jacky L. Snoep, Olga Krebs, Carole A. Goble

Proceedings of the ISWC 2010 Posters & Demonstrations Track: Collected Abstracts, 2010

2008

Performing statistical analyses on quantitative data in Taverna workflows: An example using R and maxdBrowse to identify differentially-expressed genes from microarray data.

Peter Li, Juan I. Castrillo, Giles Velarde, Ingo Wassink, Stian Soiland-Reyes, Stuart Owen, David Withers, Tom Oinn, Matthew R. Pocock, Carole A. Goble, Stephen G. Oliver, Douglas B. Kell

BMC Bioinform., 2008