Steven A. Niederer

Orcid: 0000-0002-4612-6982

Affiliations:
  • King's College London, Department of Biomedical Engineering, United Kingdom


According to our database1, Steven A. Niederer authored at least 104 papers between 2006 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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Online presence:

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Bibliography

2024
Credibility assessment of in silico clinical trials for medical devices.
PLoS Comput. Biol., 2024

Whole-heart electromechanical simulations using Latent Neural Ordinary Differential Equations.
npj Digit. Medicine, 2024

Unsupervised unpaired multiple fusion adaptation aided with self-attention generative adversarial network for scar tissues segmentation framework.
Inf. Fusion, 2024

Self-supervised spatial-temporal transformer fusion based federated framework for 4D cardiovascular image segmentation.
Inf. Fusion, 2024

Adenocarcinoma Segmentation Using Pre-trained Swin-UNet with Parallel Cross-Attention for Multi-Domain Imaging.
CoRR, 2024

Improved 3D Whole Heart Geometry from Sparse CMR Slices.
CoRR, 2024

Probabilistic Richardson Extrapolation.
CoRR, 2024

Adaptive Bi-ventricle Surface Reconstruction from Cardiovascular Imaging.
Proceedings of the Shape in Medical Imaging - International Workshop, 2024

Assessment of Left Atrium Motion Deformation Through Full Cardiac Cycle.
Proceedings of the AI 2024: Advances in Artificial Intelligence, 2024

A Deep Learning Framework for Assessing the Risk of Transvenous Lead Extraction Procedures.
Proceedings of the Artificial Intelligence in Healthcare - First International Conference, 2024

2023
Evaluation of an open-source pipeline to create patient-specific left atrial models: A reproducibility study.
Comput. Biol. Medicine, August, 2023

Fiber Organization Has Little Effect on Electrical Activation Patterns During Focal Arrhythmias in the Left Atrium.
IEEE Trans. Biomed. Eng., May, 2023

Mechanoelectric effects in healthy cardiac function and under Left Bundle Branch Block pathology.
Comput. Biol. Medicine, April, 2023

Assessing the arrhythmogenic risk of engineered heart tissue patches through <i>in silico</i> application on infarcted ventricle models.
Comput. Biol. Medicine, March, 2023

Quantifying the impact of shape uncertainty on predicted arrhythmias.
Comput. Biol. Medicine, February, 2023

Cell to whole organ global sensitivity analysis on a four-chamber heart electromechanics model using Gaussian processes emulators.
PLoS Comput. Biol., 2023

Real-time whole-heart electromechanical simulations using Latent Neural Ordinary Differential Equations.
CoRR, 2023

Model Reproducibility Study on Left Atrial Fibres.
CoRR, 2023

Neural Implicit Functions for 3D Shape Reconstruction from Standard Cardiovascular Magnetic Resonance Views.
Proceedings of the Statistical Atlases and Computational Models of the Heart. Regular and CMRxRecon Challenge Papers, 2023

ModusGraph: Automated 3D and 4D Mesh Model Reconstruction from Cine CMR with Improved Accuracy and Efficiency.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Whole Heart 3D Shape Reconstruction from Sparse Views: Leveraging Cardiac Computed Tomography for Cardiovascular Magnetic Resonance.
Proceedings of the Functional Imaging and Modeling of the Heart, 2023

Automatic Detection of Coil Position in the Chest X-ray Images for Assessing the Risks of Lead Extraction Procedures.
Proceedings of the Functional Imaging and Modeling of the Heart, 2023

Effect of Varying Pericardial Boundary Conditions on Whole Heart Function: A Computational Study.
Proceedings of the Functional Imaging and Modeling of the Heart, 2023

Multiscale Kernel Atrous Convolution Network for Segmentation of Myocardium.
Proceedings of the International Conference on Digital Image Computing: Techniques and Applications, 2023

Biatrial Modelling for In Silico Prediction of Atrial Fibrillation Inducibility.
Proceedings of the Computing in Cardiology, 2023

2022
Credibility assessment of patient-specific computational modeling using patient-specific cardiac modeling as an exemplar.
PLoS Comput. Biol., October, 2022

Global Sensitivity Analysis of Four Chamber Heart Hemodynamics Using Surrogate Models.
IEEE Trans. Biomed. Eng., 2022

Correction: Linking statistical shape models and simulated function in the healthy adult human heart.
PLoS Comput. Biol., 2022

Detection of focal source and arrhythmogenic substrate from body surface potentials to guide atrial fibrillation ablation.
PLoS Comput. Biol., 2022

Modelling the interaction between stem cells derived cardiomyocytes patches and host myocardium to aid non-arrhythmic engineered heart tissue design.
PLoS Comput. Biol., 2022

An automated near-real time computational method for induction and treatment of scar-related ventricular tachycardias.
Medical Image Anal., 2022

On the incorporation of obstacles in a fluid flow problem using a Navier-Stokes-Brinkman penalization approach.
J. Comput. Sci., 2022

Impact of anatomical reverse remodelling in the design of optimal quadripolar pacing leads: A computational study.
Comput. Biol. Medicine, 2022

Regional left ventricle scar detection from routine cardiac computed tomography angiograms using latent space classification.
Comput. Biol. Medicine, 2022

Automatic Cardiac Magnetic Resonance Respiratory Motions Assessment and Segmentation.
Proceedings of the Statistical Atlases and Computational Models of the Heart. Regular and CMRxMotion Challenge Papers, 2022

Segmentation of Intra-operative Ultrasound Using Self-supervised Learning Based 3D-ResUnet Model with Deep Supervision.
Proceedings of the Lesion Segmentation in Surgical and Diagnostic Applications, 2022

Updates on OpenEP: The Open-Source Platform for Electrophysiological Data Analysis.
Proceedings of the Computing in Cardiology, 2022

A Workflow for Probabilistic Calibration of Models of Left Atrial Electrophysiology.
Proceedings of the Computing in Cardiology, 2022


The Influence of Left Atrial Wall Thickness and Curvature on Wall Strain in Patient-Specific Atrium Models.
Proceedings of the Computing in Cardiology, 2022

2021
Linking statistical shape models and simulated function in the healthy adult human heart.
PLoS Comput. Biol., 2021

In silico identification of potential calcium dynamics and sarcomere targets for recovering left ventricular function in rat heart failure with preserved ejection fraction.
PLoS Comput. Biol., 2021

Scaling digital twins from the artisanal to the industrial.
Nat. Comput. Sci., 2021

Non-invasive simulated electrical and measured mechanical indices predict response to cardiac resynchronization therapy.
Comput. Biol. Medicine, 2021

Whole Heart Anatomical Refinement from CCTA Using Extrapolation and Parcellation.
Proceedings of the Functional Imaging and Modeling of the Heart, 2021

The Effect of Ventricular Myofibre Orientation on Atrial Dynamics.
Proceedings of the Functional Imaging and Modeling of the Heart, 2021

Optimisation of Left Atrial Feature Tracking Using Retrospective Gated Computed Tomography Images.
Proceedings of the Functional Imaging and Modeling of the Heart, 2021

Impact of Image Resolution and Resampling on Motion Tracking of the Left Chambers from Cardiac Scans.
Proceedings of the Functional Imaging and Modeling of the Heart, 2021

In Silico Mapping of the Omecamtiv Mecarbil Effects from the Sarcomere to the Whole-Heart and Back Again.
Proceedings of the Functional Imaging and Modeling of the Heart, 2021

Using the Universal Atrial Coordinate System for MRI and Electroanatomic Data Registration in Patient-Specific Left Atrial Model Construction and Simulation.
Proceedings of the Functional Imaging and Modeling of the Heart, 2021

2020
Probabilistic Interpolation of Uncertain Local Activation Times on Human Atrial Manifolds.
IEEE Trans. Biomed. Eng., 2020

CemrgApp: An interactive medical imaging application with image processing, computer vision, and machine learning toolkits for cardiovascular research.
SoftwareX, 2020

Quantifying atrial anatomy uncertainty from clinical data and its impact on electro-physiology simulation predictions.
Medical Image Anal., 2020

Gaussian Process Manifold Interpolation for Probabilistic Atrial Activation Maps and Uncertain Conduction Velocity.
CoRR, 2020

His Bundle Pacing but not Left Bundle Pacing Corrects Septal Flash in Left Bundle Branch Block Patients.
Proceedings of the Computing in Cardiology, 2020

Software Framework to Quantify Pulmonary Vein Isolation Atrium Scar Tissue.
Proceedings of the Computing in Cardiology, 2020

Constructing Realistic Canine Bilayer Biatrial Mesh for the Modeling and Simulation of Atria Fibrillation.
Proceedings of the Computing in Cardiology, 2020

Constructing Virtual Patient Cohorts for Simulating Atrial Fibrillation Ablation.
Proceedings of the Computing in Cardiology, 2020

Robust Atrial Ectopic Beat Classification From Surface ECG Using Second-Order Blind Source Separation.
Proceedings of the Computing in Cardiology, 2020

Modelling the Effects of Conductive Polymers and Stem Cells Derived Myocytes on Scarred Heart Tissue.
Proceedings of the Computing in Cardiology, 2020

Direct Transcription for Dynamic Optimization: A Tutorial with a Case Study on Dual-Patient Ventilation During the COVID-19 Pandemic.
Proceedings of the 59th IEEE Conference on Decision and Control, 2020

2019
Universal atrial coordinates applied to visualisation, registration and construction of patient specific meshes.
Medical Image Anal., 2019

A rule-based method for predicting the electrical activation of the heart with cardiac resynchronization therapy from non-invasive clinical data.
Medical Image Anal., 2019

A technique for measuring anisotropy in atrial conduction to estimate conduction velocity and atrial fibre direction.
Comput. Biol. Medicine, 2019

Generation of a cohort of whole-torso cardiac models for assessing the utility of a novel computed shock vector efficiency metric for ICD optimisation.
Comput. Biol. Medicine, 2019

Solution to the Unknown Boundary Tractions in Myocardial Material Parameter Estimations.
Proceedings of the Functional Imaging and Modeling of the Heart, 2019

Myocardial Transmural Electrical Disruption Affects Electrogram Pattern.
Proceedings of the 46th Computing in Cardiology, 2019

2018
Personalized computational modeling of left atrial geometry and transmural myofiber architecture.
Medical Image Anal., 2018

A work flow to build and validate patient specific left atrium electrophysiology models from catheter measurements.
Medical Image Anal., 2018

Analytical approaches for myocardial fibrillation signals.
Comput. Biol. Medicine, 2018

Convolutional Neural Networks for Segmentation of the Left Atrium from Gadolinium-Enhancement MRI Images.
Proceedings of the Statistical Atlases and Computational Models of the Heart. Atrial Segmentation and LV Quantification Challenges, 2018

Predicting Activation Patterns in Cardiac Resynchronization Therapy Patients.
Proceedings of the Computing in Cardiology, 2018

Personalized Modelling Pipeline for Cardiac Electrophysiology Simulations of Cardiac Resynchronization Therapy in Infarct patients.
Proceedings of the Computing in Cardiology, 2018

An Algorithm to Sample an Anatomy With Uncertainty.
Proceedings of the Computing in Cardiology, 2018

2017
Personalized Models of Human Atrial Electrophysiology Derived From Endocardial Electrograms.
IEEE Trans. Biomed. Eng., 2017

Efficient computation of electrograms and ECGs in human whole heart simulations using a reaction-eikonal model.
J. Comput. Phys., 2017

Probabilistic Models for Integration Error in the Assessment of Functional Cardiac Models.
Proceedings of the Advances in Neural Information Processing Systems 30: Annual Conference on Neural Information Processing Systems 2017, 2017

Feasibility of the Estimation of Myocardial Stiffness with Reduced 2D Deformation Data.
Proceedings of the Functional Imaging and Modelling of the Heart, 2017

A Platform for Quantifying Atrial Structural Remodelling.
Proceedings of the Computing in Cardiology, 2017

A Predictive Personalised Model for the Left Atrium.
Proceedings of the Computing in Cardiology, 2017

2016
A Biophysical Systems Approach to Identifying the Pathways of Acute and Chronic Doxorubicin Mitochondrial Cardiotoxicity.
PLoS Comput. Biol., 2016

Anatomically accurate high resolution modeling of human whole heart electromechanics: A strongly scalable algebraic multigrid solver method for nonlinear deformation.
J. Comput. Phys., 2016

Personalised Biophysical Model to Optimise Left Ventricle Pacing Location for Cardiac Resynchronisation Therapy Over Time.
Proceedings of the Computing in Cardiology, CinC 2016, Vancouver, 2016

Personalized Modeling Pipeline for Left Atrial Electromechanics.
Proceedings of the Computing in Cardiology, CinC 2016, Vancouver, 2016

Predicting Spiral Wave Stability by Personalized Electrophysiology Models.
Proceedings of the Computing in Cardiology, CinC 2016, Vancouver, 2016

2015
Improving the Stability of Cardiac Mechanical Simulations.
IEEE Trans. Biomed. Eng., 2015

A Spatially Detailed Model of Isometric Contraction Based on Competitive Binding of Troponin I Explains Cooperative Interactions between Tropomyosin and Crossbridges.
PLoS Comput. Biol., 2015

Myocardial Stiffness Estimation: A Novel Cost Function for Unique Parameter Identification.
Proceedings of the Functional Imaging and Modeling of the Heart, 2015

Personalization of Atrial Electrophysiology Models from Decapolar Catheter Measurements.
Proceedings of the Functional Imaging and Modeling of the Heart, 2015

2014
A computational pipeline for quantification of mouse myocardial stiffness parameters.
Comput. Biol. Medicine, 2014

Insight into model mechanisms through automatic parameter fitting: a new methodological framework for model development.
BMC Syst. Biol., 2014

Estimation of Diastolic Biomarkers: Sensitiviy to Fibre Orientation.
Proceedings of the Statistical Atlases and Computational Models of the Heart - Imaging and Modelling Challenges, 2014

2013
Quality Metrics for High Order Meshes: Analysis of the Mechanical Simulation of the Heart Beat.
IEEE Trans. Medical Imaging, 2013

The estimation of patient-specific cardiac diastolic functions from clinical measurements.
Medical Image Anal., 2013

Share and enjoy: anatomical models database - generating and sharing cardiovascular model data using web services.
Medical Biol. Eng. Comput., 2013

2012
Efficient Computational Methods for Strongly Coupled Cardiac Electromechanics.
IEEE Trans. Biomed. Eng., 2012

Integration of different cardiac electrophysiological models into a single simulation pipeline.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2011
An accurate, fast and robust method to generate patient-specific cubic Hermite meshes.
Medical Image Anal., 2011

An Automatic Data Assimilation Framework for Patient-Specific Myocardial Mechanical Parameter Estimation.
Proceedings of the Functional Imaging and Modeling of the Heart, 2011

2010
Generic Conduction Parameters for Predicting Activation Waves in Customised Cardiac Electrophysiology Models.
Proceedings of the Statistical Atlases and Computational Models of the Heart, 2010

Personalization of Cubic Hermite Meshes for Efficient Biomechanical Simulations.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

2009
The Role of the Frank-Starling Law in the Transduction of Cellular Work to Whole Organ Pump Function: A Computational Modeling Analysis.
PLoS Comput. Biol., 2009

The Importance of Model Parameters and Boundary Conditions in Whole Organ Models of Cardiac Contraction.
Proceedings of the Functional Imaging and Modeling of the Heart, 2009

2006
A Computational Model of Cardiac Electromechanics.
Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006


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