Stephen B. Johnson

According to our database, Stephen B. Johnson authored at least 90 papers between 1987 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

An architecture for research computing in health to support clinical and translational investigators with electronic patient data.

Thomas R. Campion Jr., Evan Sholle, Jyotishman Pathak, Stephen B. Johnson, John P. Leonard, Curtis L. Cole

J. Am. Medical Informatics Assoc., 2022

2021

The national landscape of culminating experiences in master's programs in health and biomedical informatics.

Suzanne Morrison Cox, Stephen B. Johnson, Eva Shiu, Sue Boren

J. Am. Medical Informatics Assoc., 2021

2020

The Impact of Model and Tokenization Method Selection on a Deep Learning Classifier on Medical Text.

Juan D. Irizarry-Cole, Stephen B. Johnson, Zane Dennis

Proceedings of the AMIA 2020, 2020

2019

Underserved populations with missing race ethnicity data differ significantly from those with structured race/ethnicity documentation.

Evan Sholle, Laura C. Pinheiro, Prakash Adekkanattu, Marcos Davila, Stephen B. Johnson, Jyotishman Pathak, Sanjai Sinha, Cassidie Li, Stasi A Lubansky, Monika M. Safford, Thomas R. Campion Jr.

J. Am. Medical Informatics Assoc., 2019

Unifying System Health Management and Automated Decision Making.

Edward Balaban, Stephen B. Johnson, Mykel J. Kochenderfer

J. Artif. Intell. Res., 2019

Rethinking System Health Management.

Edward Balaban, Stephen B. Johnson, Mykel J. Kochenderfer

CoRR, 2019

Educational Communities in the Academic Forum: Sharing Knowledge and Promoting Standards.

Stephen B. Johnson, Saif S. Khairat, Suzanne Austin Boren, Vishnu Mohan, Eva LaVerne Manos, William R. Hersh

Proceedings of the AMIA 2019, 2019

2018

AMIA Board White Paper: AMIA 2017 core competencies for applied health informatics education at the master's degree level.

Annette L. Valenta, Eta S. Berner, Suzanne Austin Boren, Gloria J. Deckard, Christina Eldredge, Douglas B. Fridsma, Cynthia S. Gadd, Yang Gong, Todd R. Johnson, Josette Jones, E. LaVerne Manos, Kirk T. Phillips, Nancy K. Roderer, Douglas Rosendale, Anne M. Turner, Günter Tusch, Jeffrey J. Williamson, Stephen B. Johnson

J. Am. Medical Informatics Assoc., 2018

Ascertaining Depression Severity by Extracting Patient Health Questionnaire-9 (PHQ-9) Scores from Clinical Notes.

Prakash Adekkanattu, Evan Sholle, Joseph J. DeFerio, Jyotishman Pathak, Stephen B. Johnson, Thomas R. Campion Jr.

Proceedings of the AMIA 2018, 2018

2017

Navigation in the electronic health record: A review of the safety and usability literature.

Lisette C. Roman, Jessica S. Ancker, Stephen B. Johnson, Yalini Senathirajah

J. Biomed. Informatics, 2017

Understanding the Role of Technology for Screening Participants in Clinical Studies.

En-Ju D. Lin, Stephen B. Johnson, Chaitanya Shivade, Peter J. Embí, Albert M. Lai

Proceedings of the Summit on Clinical Research Informatics, 2017

Secondary Use of Patients' Electronic Records (SUPER): An Approach for Meeting Specific Data Needs of Clinical and Translational Researchers.

Evan Sholle, Joseph Kabariti, Stephen B. Johnson, John P. Leonard, Jyotishman Pathak, Vinay I. Varughese, Curtis L. Cole, Thomas R. Campion Jr.

Proceedings of the AMIA 2017, 2017

2016

Data management in clinical research: Synthesizing stakeholder perspectives.

Stephen B. Johnson, Frank J. Farach, Kevin A. Pelphrey, Leon Rozenblit

J. Biomed. Informatics, 2016

Designing an evaluation methods course in health informatics.

Jessica S. Ancker, Stephen B. Johnson

Proceedings of the AMIA 2016, 2016

2015

Health Informatics Graduate Program Accreditation: CAHIIM Process and Standards Update.

Judith J. Warren, Stephen B. Johnson, Suzanne Austin Boren, Stuart M. Speedie, Günter Tusch

Proceedings of the AMIA 2015, 2015

2014

Automatic generation of investigator bibliographies for institutional research networking systems.

Stephen B. Johnson, Michael E. Bales, Daniel Dine, Suzanne Bakken, Paul J. Albert, Chunhua Weng

J. Biomed. Informatics, 2014

Associating co-authorship patterns with publications in high-impact journals.

Michael E. Bales, Daniel C. Dine, Jacqueline A. Merrill, Stephen B. Johnson, Suzanne Bakken, Chunhua Weng

J. Biomed. Informatics, 2014

A review of approaches to identifying patient phenotype cohorts using electronic health records.

Chaitanya P. Shivade, Preethi Raghavan, Eric Fosler-Lussier, Peter J. Embí, Noémie Elhadad, Stephen B. Johnson, Albert M. Lai

J. Am. Medical Informatics Assoc., 2014

Towards Symbiosis in Knowledge Representation and Natural Language Processing for Structuring Clinical Practice Guidelines.

Chunhua Weng, Philip R. O. Payne, Mark Velez, Stephen B. Johnson, Suzanne Bakken

Proceedings of the Nursing Informatics 2014 - East Meets West eSMART+, 2014

An Institutional Strategy to Support Clinical Research with Centrally Managed Custom Data Repositories.

Stephen B. Johnson, Thomas R. Campion Jr., Nonie E. Pegoraro, Leon Rozenblit, Charles Tirrell, Curt Cole

Proceedings of the AMIA 2014, 2014

2013

Health information exchange system usage patterns in three communities: Practice sites, users, patients, and data.

Thomas R. Campion Jr., Alison Edwards, Stephen B. Johnson, Rainu Kaushal

Int. J. Medical Informatics, 2013

2012

Barriers to and Facilitators of Community-Based Health Information Technology Implementation.

Thomas R. Campion Jr., Lisa M. Kern, Alison Edwards, Renny Thomas, Stephen B. Johnson, Rainu Kaushal

Proceedings of the AMIA 2012, 2012

2011

EliXR: an approach to eligibility criteria extraction and representation.

Chunhua Weng, Xiaoying Wu, Zhihui Luo, Mary Regina Boland, Dimitri Theodoratos, Stephen B. Johnson

J. Am. Medical Informatics Assoc., 2011

Facilitating the Iterative Design of Informatics Tools to Advance the Science of Autism.

David R. Kaufman, Patrick Cronin, Leon Rozenblit, David Voccola, Amanda Horton, Alisabeth Shine, Stephen B. Johnson

Proceedings of the User Centered Networked Health Care - Proceedings of MIE 2011, 2011

2010

Using global unique identifiers to link autism collections.

Stephen B. Johnson, Glen Whitney, Matthew J. McAuliffe, Hailong Wang, Evan S. McCreedy, Leon Rozenblit, Clark C. Evans

J. Am. Medical Informatics Assoc., 2010

2009

Development and evaluation of nursing user interface screens using multiple methods.

Sookyung Hyun, Stephen B. Johnson, Peter D. Stetson, Suzanne Bakken

J. Biomed. Informatics, 2009

Case Report: Iterative Evaluation of the Health Level 7 - Logical Observation Identifiers Names and Codes Clinical Document Ontology for Representing Clinical Document Names: A Case Report.

Sookyung Hyun, Jason S. Shapiro, Genevieve B. Melton, Cara Schlegel, Peter D. Stetson, Stephen B. Johnson, Suzanne Bakken

J. Am. Medical Informatics Assoc., 2009

Research Paper: Voice Capture of Medical Residents' Clinical Information Needs During an Inpatient Rotation.

Herbert S. Chase, David R. Kaufman, Stephen B. Johnson, Eneida A. Mendonça

J. Am. Medical Informatics Assoc., 2009

Evaluation of a Prototype Search and Visualization System for Exploring Scientific Communities.

Michael E. Bales, David R. Kaufman, Stephen B. Johnson

Proceedings of the AMIA 2009, 2009

2008

A multi-level model of information seeking in the clinical domain.

Peter W. Hung, Stephen B. Johnson, David R. Kaufman, Eneida A. Mendonça

J. Biomed. Informatics, 2008

Research Paper: Preliminary Development of the Physician Documentation Quality Instrument.

Peter D. Stetson, Frances P. Morrison, Suzanne Bakken, Stephen B. Johnson

J. Am. Medical Informatics Assoc., 2008

Model Formulation: An Electronic Health Record Based on Structured Narrative.

Stephen B. Johnson, Suzanne Bakken, Daniel Dine, Sookyung Hyun, Eneida A. Mendonça, Frances P. Morrison, Tiffani J. Bright, Tielman Van Vleck, Jesse O. Wrenn, Peter D. Stetson

J. Am. Medical Informatics Assoc., 2008

Content and Structure of Clinical Problem Lists: A Corpus Analysis.

Tielman Van Vleck, Adam B. Wilcox, Peter D. Stetson, Stephen B. Johnson, Noémie Elhadad

Proceedings of the AMIA 2008, 2008

Re-engineering Opportunities in Clinical Research using Workflow Analysis in Community Practice Settings.

Sharib A. Khan, Rita Kukafka, J. Thomas Bigger, Stephen B. Johnson

Proceedings of the AMIA 2008, 2008

2007

Conceptual knowledge acquisition in biomedicine: A methodological review.

Philip R. O. Payne, Eneida A. Mendonça, Stephen B. Johnson, Justin Starren

J. Biomed. Informatics, 2007

Bridging the gap between biological and clinical informatics in a graduate training program.

Stephen B. Johnson, Richard A. Friedman

J. Biomed. Informatics, 2007

Research Paper: Topological Analysis of Large-scale Biomedical Terminology Structures.

Michael E. Bales, Yves A. Lussier, Stephen B. Johnson

J. Am. Medical Informatics Assoc., 2007

A Day in the Life of a Clinical Research Coordinator: Observations from Community Practice Settings.

Sharib A. Khan, Rita Kukafka, Philip R. O. Payne, J. Thomas Bigger, Stephen B. Johnson

Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

An Unsupervised Machine Learning Approach to Segmentation of Clinician-Entered Free Text.

Jesse O. Wrenn, Peter D. Stetson, Stephen B. Johnson

Proceedings of the AMIA 2007, 2007

Assessing Data Relevance For Automated Generation Of A Clinical Summary.

Tielman Van Vleck, Daniel M. Stein, Peter D. Stetson, Stephen B. Johnson

Proceedings of the AMIA 2007, 2007

Signout: A Collaborative Document with Implications for the Future of Clinical Information Systems.

Daniel M. Stein, Jesse O. Wrenn, Stephen B. Johnson, Peter D. Stetson

Proceedings of the AMIA 2007, 2007

2006

Graph theoretic modeling of large-scale semantic networks.

Michael E. Bales, Stephen B. Johnson

J. Biomed. Informatics, 2006

Modeling Clinical Trials Workflow in Community Practice Settings.

Sharib A. Khan, Philip R. O. Payne, Stephen B. Johnson, J. Thomas Bigger, Rita Kukafka

Proceedings of the AMIA 2006, 2006

Heuristic Evaluation of eNote: an Electronic Notes System.

Tiffani J. Bright, Suzanne Bakken, Stephen B. Johnson

Proceedings of the AMIA 2006, 2006

2005

Model Formulation: Modeling Electronic Discharge Summaries as a Simple Temporal Constraint Satisfaction Problem.

George Hripcsak, Li Zhou, Simon Parsons, Amar K. Das, Stephen B. Johnson

J. Am. Medical Informatics Assoc., 2005

ISO reference terminology models for nursing: Applicability for natural language processing of nursing narratives.

Suzanne Bakken, Sookyung Hyun, Carol Friedman, Stephen B. Johnson

Int. J. Medical Informatics, 2005

Document Ontology: Supporting Narrative Documents in Electronic Health Records.

Jason S. Shapiro, Suzanne Bakken, Sookyung Hyun, Genevieve B. Melton, Cara Schlegel, Stephen B. Johnson

Proceedings of the AMIA 2005, 2005

Analyzing the Structure and Content of Public Health Messages.

Frances P. Morrison, Rita Kukafka, Stephen B. Johnson

Proceedings of the AMIA 2005, 2005

Clinicians' Perceptions of Usability of eNote.

Janet P. Haas, Suzanne Bakken, Tiffani J. Bright, Genevieve B. Melton, Peter D. Stetson, Stephen B. Johnson

Proceedings of the AMIA 2005, 2005

2004

Scenario-based Assessment of Physicians' Information Needs.

Yoon-Ho Seol, David R. Kaufman, Eneida A. Mendonça, James J. Cimino, Stephen B. Johnson

Proceedings of the MEDINFO 2004, 2004

A Comparison of Semantic Categories of the ISO Reference Terminology Models for Nursing and the MedLEE Natural Language Processing System.

Suzanne Bakken, Sookyung Hyun, Carol Friedman, Stephen B. Johnson

Proceedings of the MEDINFO 2004, 2004

Integrating Public Health and Computer Science Theoretical Perspectives for Developing Tailored Health Messages.

Rita Kukafka, Frances P. Morrison, Stephen B. Johnson

Proceedings of the Dialogue Systems for Health Communication, 2004

2003

Grounding a new information technology implementation framework in behavioral science: a systematic analysis of the literature on IT use.

Rita Kukafka, Stephen B. Johnson, Allison Linfante, John P. Allegrante

J. Biomed. Informatics, 2003

Automatic Learning of the Morphology of Medical Language using Information Compression.

Shamim Mollah, Stephen B. Johnson

Proceedings of the AMIA 2003, 2003

A Native XML Database Design for Clinical Document Research.

Stephen B. Johnson, David A. Campbell, Michael Krauthammer, P. Karina Tulipano, Eneida A. Mendonça, Carol Friedman, George Hripcsak

Proceedings of the AMIA 2003, 2003

A Framework for the Biomedical Informatics Curriculum.

Stephen B. Johnson

Proceedings of the AMIA 2003, 2003

Natural Language Processing Challenges in HIV/AIDS Clinic Notes.

Sookyung Hyun, Suzanne Bakken, Carol Friedman, Stephen B. Johnson

Proceedings of the AMIA 2003, 2003

2002

Research Paper: Automatic Resolution of Ambiguous Terms Based on Machine Learning and Conceptual Relations in the UMLS.

Hongfang Liu, Stephen B. Johnson, Carol Friedman

J. Am. Medical Informatics Assoc., 2002

The cognitive demands of an innovative query user interface.

Di Wang, David R. Kaufman, Eneida A. Mendonça, Yoon-Ho Seol, Stephen B. Johnson, James J. Cimino

Proceedings of the AMIA 2002, 2002

The sublanguage of cross-coverage.

Peter D. Stetson, Stephen B. Johnson, Matthew Scotch, George Hripcsak

Proceedings of the AMIA 2002, 2002

Knowledge Acquisition of Generic Queries for Information Retrieval.

Yoon-Ho Seol, Stephen B. Johnson, James J. Cimino

Proceedings of the AMIA 2002, 2002

Using Patient Data to Rank Records of Literature Retrieval.

Eneida A. Mendonça, James J. Cimino, Stephen B. Johnson

Proceedings of the AMIA 2002, 2002

Representing nested semantic information in a linear string of text using XML.

Michael Krauthammer, Stephen B. Johnson, George Hripcsak, David A. Campbell, Carol Friedman

Proceedings of the AMIA 2002, 2002

Analyzing the Semantics of patient data to rank records of literature retrieval.

Eneida A. Mendonça, Stephen B. Johnson, Yoon-Ho Seol, James J. Cimino

Proceedings of the ACL 2002 Workshop on Natural Language Processing in the Biomedical Domain, 2002

A transformational-based learner for dependency grammars in discharge summaries.

David A. Campbell, Stephen B. Johnson

Proceedings of the ACL 2002 Workshop on Natural Language Processing in the Biomedical Domain, 2002

2001

Accessing Heterogeneous Sources of Evidence to Answer Clinical Questions.

Eneida A. Mendonça, James J. Cimino, Stephen B. Johnson, Yoon-Ho Seol

J. Biomed. Informatics, 2001

Natural Language Processing, Medical Terminologies, and Ontological Issues for Patient Records and Biomedical Knowledge.

Robert H. Baud, Stephen B. Johnson, Christopher G. Chute, Olivier Bodenreider, Jeremy Rogers, Anita Burgun

Proceedings of the MEDINFO 2001, 2001

GeneWays: A System for Mining Text and for Integrating Data on Molecular Pathways.

Andrey Rzhetsky, Michael Krauthammer, Tomohiro Koike, Pauline Kra, Shawn M. Gomez, Hong Yu, Pablo Ariel Duboué, Wubin Weng, Stephen B. Johnson, Vasileios Hatzivassiloglou, Carol Friedman

Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001

Conceptual Guidance in Information Retrieval.

Yoon-Ho Seol, Stephen B. Johnson, James J. Cimino

Proceedings of the AMIA 2001, 2001

Using narrative reports to support a digital library.

Eneida A. Mendonça, James J. Cimino, Stephen B. Johnson

Proceedings of the AMIA 2001, 2001

Evaluating the UMLS as a source of lexical knowledge for medical language processing.

Carol Friedman, Hongfang Liu, Lyudmila Shagina, Stephen B. Johnson, George Hripcsak

Proceedings of the AMIA 2001, 2001

Comparing syntactic complexity in medical and non-medical corpora.

David A. Campbell, Stephen B. Johnson

Proceedings of the AMIA 2001, 2001

2000

Review: An Object-oriented Taxonomy of Medical Data Presentations.

Justin Starren, Stephen B. Johnson

J. Am. Medical Informatics Assoc., 2000

Knowledge Sharing in the Construction of an Anatomical Navigational Ontology.

Michael Krauthammer, Nina Wacholder, Stephen B. Johnson, Gai Elhanan, Pat Molholt

Proceedings of the AMIA 2000, 2000

Generic data modeling for home telemonitoring of chronically ill patients.

Jinsong Cai, Stephen B. Johnson, George Hripcsak

Proceedings of the AMIA 2000, 2000

1999

Research Paper: A Semantic Lexicon for Medical Language Processing.

Stephen B. Johnson

J. Am. Medical Informatics Assoc., 1999

White Paper: Multicenter Patient Records Research: Security Policies and Tools.

Fred M. Behlen, Stephen B. Johnson

J. Am. Medical Informatics Assoc., 1999

New Dogs for Old Tricks: Finite State Modeling and XML for Access to Legacy Systems.

Justin Starren, Stephen B. Johnson

Proceedings of the AMIA 1999, 1999

Use of the Extensible Stylesheet Language (XSL) for medical data transformation.

Yoon-Ho Seol, Stephen B. Johnson, Justin B. Starren

Proceedings of the AMIA 1999, 1999

Extended SQL for manipulating clinical warehouse data.

Stephen B. Johnson, Damianos Chatziantoniou

Proceedings of the AMIA 1999, 1999

A technique for semantic classification of unknown words using UMLS resources.

David A. Campbell, Stephen B. Johnson

Proceedings of the AMIA 1999, 1999

Security architecture for multi-site patient records research.

Fred M. Behlen, Stephen B. Johnson

Proceedings of the AMIA 1999, 1999

1997

Generic database design for patient management information.

Stephen B. Johnson, T. Paul, A. Khenina

Proceedings of the AMIA 1997, 1997

1996

Model Formulation: Generic Data Modeling for Clinical Rrepositories.

Stephen B. Johnson

J. Am. Medical Informatics Assoc., 1996

1995

Natural language processing in an operational clinical information system.

Carol Friedman, George Hripcsak, William DuMouchel, Stephen B. Johnson, Paul D. Clayton

Nat. Lang. Eng., 1995

Two Applications of Statistical Modelling to Natural Language Processing.

William DuMouchel, Carol Friedman, George Hripcsak, Stephen B. Johnson, Paul D. Clayton

Proceedings of the Learning from Data, 1995

1994

Research Paper: A Schema for Representing Medical Language Applied to Clinical Radiology.

Carol Friedman, James J. Cimino, Stephen B. Johnson

J. Am. Medical Informatics Assoc., 1994

Research Paper: A General Natural-language Text Processor for Clinical Radiology.

Carol Friedman, Philip O. Alderson, John H. M. Austin, James J. Cimino, Stephen B. Johnson

J. Am. Medical Informatics Assoc., 1994

Research Paper: Knowledge-based Approaches to the Maintenance of a Large Controlled Medical Terminology.

James J. Cimino, Paul D. Clayton, George Hripcsak, Stephen B. Johnson

J. Am. Medical Informatics Assoc., 1994

1987

An Analyzer for the Information Content of Sentences (Semantics).

Stephen B. Johnson

PhD thesis, 1987