Stefania Bortoluzzi

According to our database, Stefania Bortoluzzi authored at least 16 papers between 2001 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Discovery of fusion circular RNAs in leukemia with <i>KMT2A::AFF1</i> rearrangements by the new software CircFusion.

Anna Dal Molin, Caterina Tretti Parenzan, Enrico Gaffo, Cristina Borin, Elena Boldrin, Lueder H. Meyer, Geertruij te Kronnie, Silvia Bresolin, Stefania Bortoluzzi

Briefings Bioinform., January, 2023

Systematic benchmarking of statistical methods to assess differential expression of circular RNAs.

Alessia Buratin, Stefania Bortoluzzi, Enrico Gaffo

Briefings Bioinform., January, 2023

2022

Correction to: CRAFT a bioinformatics software for custom prediction of circular RNA functions.

Anna Dal Molin, Enrico Gaffo, Valeria Difilippo, Alessia Buratin, Caterina Tretti Parenzan, Silvia Bresolin, Stefania Bortoluzzi

Briefings Bioinform., 2022

CRAFT: a bioinformatics software for custom prediction of circular RNA functions.

Anna Dal Molin, Enrico Gaffo, Valeria Difilippo, Alessia Buratin, Caterina Tretti Parenzan, Silvia Bresolin, Stefania Bortoluzzi

Briefings Bioinform., 2022

Sensitive, reliable and robust circRNA detection from RNA-seq with CirComPara2.

Enrico Gaffo, Alessia Buratin, Anna Dal Molin, Stefania Bortoluzzi

Briefings Bioinform., 2022

2021

iWhale: a computational pipeline based on Docker and SCons for detection and annotation of somatic variants in cancer WES data.

Andrea Binatti, Silvia Bresolin, Stefania Bortoluzzi, Alessandro Coppe

Briefings Bioinform., 2021

2019

A survey of software tools for microRNA discovery and characterization using RNA-seq.

Michele Bortolomeazzi, Enrico Gaffo, Stefania Bortoluzzi

Briefings Bioinform., 2019

2012

MAGIA²: from miRNA and genes expression data integrative analysis to microRNA-transcription factor mixed regulatory circuits (2012 update).

Andrea Bisognin, Gabriele Sales, Alessandro Coppe, Stefania Bortoluzzi, Chiara Romualdi

Nucleic Acids Res., 2012

2010

MAGIA, a web-based tool for miRNA and Genes Integrated Analysis.

Gabriele Sales, Alessandro Coppe, Andrea Bisognin, Marta Biasiolo, Stefania Bortoluzzi, Chiara Romualdi

Nucleic Acids Res., 2010

Critical Analysis of Transcriptional and Post-Transcriptional Regulatory Networks in Multiple Myeloma.

Marta Biasiolo, Mattia Forcato, Lino Possamai, Francesco Ferrari, Luca Agnelli, Marta Lionetti, Katia Todoerti, Antonino Neri, Massimo Marchiori, Stefania Bortoluzzi, Silvio Bicciato

Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010

2009

A-MADMAN: Annotation-based microarray data meta-analysis tool.

Andrea Bisognin, Alessandro Coppe, Francesco Ferrari, Davide Risso, Chiara Romualdi, Silvio Bicciato, Stefania Bortoluzzi

BMC Bioinform., 2009

2007

Novel definition files for human GeneChips based on GeneAnnot.

Francesco Ferrari, Stefania Bortoluzzi, Alessandro Coppe, Alexandra Sirota, Marilyn Safran, Michael Shmoish, Sergio Ferrari, Doron Lancet, Gian Antonio Danieli, Silvio Bicciato

BMC Bioinform., 2007

2006

REEF: searching REgionally Enriched Features in genomes.

Alessandro Coppe, Gian Antonio Danieli, Stefania Bortoluzzi

BMC Bioinform., 2006

2005

A multistep bioinformatic approach detects putative regulatory elements in gene promoters.

Stefania Bortoluzzi, Alessandro Coppe, Andrea Bisognin, Cinzia Pizzi, Gian Antonio Danieli

BMC Bioinform., 2005

2004

Detection of chromosomal regions showing differential gene expression in human skeletal muscle and in alveolar rhabdomyosarcoma.

Andrea Bisognin, Stefania Bortoluzzi, Gian Antonio Danieli

BMC Bioinform., 2004

2001

Differential expression of genes coding for ribosomal proteins in different human tissues.

Stefania Bortoluzzi, Fabio d'Alessi, Chiara Romualdi, Gian Antonio Danieli

Bioinform., 2001