Spencer Bliven

According to our database, Spencer Bliven authored at least 10 papers between 2010 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2021

TRAL 2.0: Tandem Repeat Detection With Circular Profile Hidden Markov Models and Evolutionary Aligner.

Matteo Delucchi, Paulina Näf, Spencer Bliven, Maria Anisimova

Frontiers Bioinform., 2021

2019

BioJava 5: A community driven open-source bioinformatics library.

Aleix Lafita, Spencer Bliven, Andreas Prlic, Dmytro Guzenko, Peter W. Rose, Anthony R. Bradley, Paolo Pavan, Douglas Myers-Turnbull, Yana Valasatava, Michael L. Heuer, Matt Larson, Stephen K. Burley, Jose M. Duarte

PLoS Comput. Biol., 2019

Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm.

Spencer E. Bliven, Aleix Lafita, Peter W. Rose, Guido Capitani, Andreas Prlic, Philip E. Bourne

PLoS Comput. Biol., 2019

2018

Automated evaluation of quaternary structures from protein crystals.

Spencer Bliven, Aleix Lafita, Althea Parker, Guido Capitani, Jose M. Duarte

PLoS Comput. Biol., 2018

2016

Systems biology of the structural proteome.

Elizabeth Brunk, Nathan Mih, Jonathan Monk, Zhen Zhang, Edward J. O'Brien, Spencer E. Bliven, Ke Chen, Roger L. Chang, Philip E. Bourne, Bernhard O. Palsson

BMC Syst. Biol., 2016

Understanding the fabric of protein crystals: computational classification of biological interfaces and crystal contacts.

Guido Capitani, Jose M. Duarte, Kumaran Baskaran, Spencer Bliven, Joseph C. Somody

Bioinform., 2016

2015

Structure-Preserving Rearrangements: Algorithms for Structural Comparison and Protein Analysis.

Spencer Bliven

PhD thesis, 2015

Detection of circular permutations within protein structures using CE-CP.

Spencer E. Bliven, Philip E. Bourne, Andreas Prlic

Bioinform., 2015

2012

BioJava: an open-source framework for bioinformatics in 2012.

Andreas Prlic, Andrew D. Yates, Spencer Bliven, Peter W. Rose, Julius O. B. Jacobsen, Peter V. Troshin, Mark Chapman, Jianjiong Gao, Chuan Hock Koh, Sylvain Foisy, Richard C. G. Holland, Gediminas Rimsa, Michael L. Heuer, Hannes Brandstätter-Müller, Philip E. Bourne, Scooter Willis

Bioinform., 2012

2010

Pre-calculated protein structure alignments at the RCSB PDB website.

Andreas Prlic, Spencer Bliven, Peter W. Rose, Wolfgang Bluhm, Chris Bizon, Adam Godzik, Philip E. Bourne

Bioinform., 2010