Søren Buus

According to our database, Søren Buus authored at least 12 papers between 2000 and 2014.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2014

Dataset size and composition impact the reliability of performance benchmarks for peptide-MHC binding predictions.

Yohan Kim, John Sidney, Søren Buus, Alessandro Sette, Morten Nielsen, Bjoern Peters

BMC Bioinform., 2014

2008

Quantitative Predictions of Peptide Binding to Any HLA-DR Molecule of Known Sequence: NetMHCIIpan.

Morten Nielsen, Claus Lundegaard, Thomas Blicher, Bjoern Peters, Alessandro Sette, Sune Justesen, Søren Buus, Ole Lund

PLoS Comput. Biol., 2008

Immune epitope database analysis resource (IEDB-AR).

Qing Zhang, Peng Wang, Yohan Kim, Pernille Haste-Andersen, John E. Beaver, Philip E. Bourne, Huynh-Hoa Bui, Søren Buus, Sune Frankild, Jason Greenbaum, Ole Lund, Claus Lundegaard, Morten Nielsen, Julia V. Ponomarenko, Alessandro Sette, Zhanyang Zhu, Björn Peters

Nucleic Acids Res., 2008

NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11.

Claus Lundegaard, Kasper Lamberth, Mikkel Harndahl, Søren Buus, Ole Lund, Morten Nielsen

Nucleic Acids Res., 2008

2007

Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction.

Mette V. Larsen, Claus Lundegaard, Kasper Lamberth, Søren Buus, Ole Lund, Morten Nielsen

BMC Bioinform., 2007

2006

A Community Resource Benchmarking Predictions of Peptide Binding to MHC-I Molecules.

Bjoern Peters, Huynh-Hoa Bui, Sune Frankild, Morten Nielsen, Claus Lundegaard, Emrah Kostem, Derek Basch, Kasper Lamberth, Mikkel Harndahl, Ward Fleri, Stephen S. Wilson, John Sidney, Ole Lund, Søren Buus, Alessandro Sette

PLoS Comput. Biol., 2006

The Immune Epitope Database and Analysis Resource.

Alessandro Sette, Huynh-Hoa Bui, John Sidney, Philip E. Bourne, Søren Buus, Ward Fleri, R. Kubo, Ole Lund, D. Nemazee, Julia V. Ponomarenko, Muthu Sathiamurthy, Scott Stewart, Scott Way, Stephen S. Wilson, Björn Peters

Proceedings of the Pattern Recognition in Bioinformatics, International Workshop, 2006

2004

Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach.

Morten Nielsen, Claus Lundegaard, Peder Worning, Christina Sylvester-Hvid, Kasper Lamberth, Søren Buus, Søren Brunak, Ole Lund

Bioinform., 2004

MHC Class I Epitope Binding Prediction Trained on Small Data Sets.

Claus Lundegaard, Morten Nielsen, Kasper Lamberth, Peder Worning, Christina Sylvester-Hvid, Søren Buus, Søren Brunak, Ole Lund

Proceedings of the Artificial Immune Systems, Third International Conference, 2004

2003

Selecting Informative Data for Developing Peptide-MHC Binding Predictors Using a Query by Committee Approach.

Jens Kaae Christensen, Kasper Lamberth, Morten Nielsen, Claus Lundegaard, Peder Worning, Sanne Lise Lauemøller, Søren Buus, Søren Brunak, Ole Lund

Neural Comput., 2003

2000

Modeling the interactions of a peptide-major histocompatibility class I ligand with its receptors. I. Recognition by two alpha-beta T cell receptors.

Didier Rognan, Anette Stryhn, Lars Fugger, Stig Lyngbæk, Jan Engberg, Peter Sejer Andersen, Søren Buus

J. Comput. Aided Mol. Des., 2000

Modeling the interactions of a peptide-major histocompatibility class I ligand with its receptors. II. Cross-reaction between a monoclonal antibody and two alpha-beta T cell receptors.

Didier Rognan, Jan Engberg, Anette Stryhn, Peter Sejer Andersen, Søren Buus

J. Comput. Aided Mol. Des., 2000