Song He

According to our database, Song He authored at least 56 papers between 1996 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

Multi-hierarchical error-aware contrastive learning for event argument extraction.

Song He, Wenli Du, Xin Peng, Zhangpeng Wei, Xin Li

Knowl. Based Syst., 2025

2024

An Ensemble Cascade Forest-Based Framework for Multi-Omics Drug Response and Synergy Prediction.

Ruijiang Li, Binsheng Sui, Dongjin Leng, Song He, Kunhong Liu, Xiaochen Bo

Adv. Intell. Syst., November, 2024

Multi-view uncertainty deep forest: An innovative deep forest equipped with uncertainty estimation for drug-induced liver injury prediction.

Qiong Tan, Yuqi Wen, Yong Xu, Kunhong Liu, Song He, Xiaochen Bo

Inf. Sci., 2024

A hierarchical attention network integrating multi-scale relationship for drug response prediction.

Xiaoqi Wang, Yuqi Wen, Yixin Zhang, Chong Dai, Yaning Yang, Xiaochen Bo, Song He, Shaoliang Peng

Inf. Fusion, 2024

ZSEE: A Dataset based on Zeolite Synthesis Event Extraction for Automated Synthesis Platform.

Song He, Xin Peng, Yihan Cai, Xin Li, Zhiqing Yuan, Wenli Du, Weimin Yang

Proceedings of the Findings of the Association for Computational Linguistics: NAACL 2024, 2024

CPDT: A Novel Cluster-based Paired Decision Tree for Identifying Biomedical Entity Interactions.

Jiayu Zou, Lianlian Wu, Weiping Lin, Kunhong Liu, Yong Xu, Song He, Xiaochen Bo

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

Towards Cross-Modal Text-Molecule Retrieval with Better Modality Alignment.

Jia Song, Wanru Zhuang, Yujie Lin, Liang Zhang, Chunyan Li, Jinsong Su, Song He, Xiaochen Bo

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

Exploring Optimal Transport-Based Multi-Grained Alignments for Text-Molecule Retrieval.

Zijun Min, Bingshuai Liu, Liang Zhang, Jia Song, Jinsong Su, Song He, Xiaochen Bo

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

2023

Similarity matching of medical question based on Siamese network.

Qing Li, Song He

BMC Medical Informatics Decis. Mak., December, 2023

EDST: a decision stump based ensemble algorithm for synergistic drug combination prediction.

Jing Chen, Lianlian Wu, Kunhong Liu, Yong Xu, Song He, Xiaochen Bo

BMC Bioinform., December, 2023

COMMO: a web server for the identification and analysis of consensus gene modules across multiple methods.

Xiaojing Wu, Mingfei Han, Xinyu Song, Song He, Xiaochen Bo, Yunping Zhu

Bioinform., December, 2023

A Genetic Algorithm-Based Ensemble Learning Framework for Drug Combination Prediction.

Lianlian Wu, Xiaona Ye, Yixin Zhang, Jie Gao, Zhikai Lin, Binsheng Sui, Yuqi Wen, Qingqiang Wu, Kunhong Liu, Song He, Xiaochen Bo

J. Chem. Inf. Model., June, 2023

Deep Learning-Based Multiomics Data Integration Methods for Biomedical Application.

Yuqi Wen, Linyi Zheng, Dongjin Leng, Chong Dai, Jing Lu, Zhongnan Zhang, Song He, Xiaochen Bo

Adv. Intell. Syst., May, 2023

TOXRIC: a comprehensive database of toxicological data and benchmarks.

Lianlian Wu, Bowei Yan, Junshan Han, Ruijiang Li, Jian Xiao, Song He, Xiaochen Bo

Nucleic Acids Res., January, 2023

GADRP: graph convolutional networks and autoencoders for cancer drug response prediction.

Hong Wang, Chong Dai, Yuqi Wen, Xiaoqi Wang, Wenjuan Liu, Song He, Xiaochen Bo, Shaoliang Peng

Briefings Bioinform., January, 2023

Contour-Context Joint Blind Image Inpainting Network for Molecular Sieve Particle Size Measurement of SEM Images.

Song He, Xin Peng, Zhiqing Yuan, Wenli Du

IEEE Trans. Instrum. Meas., 2023

HSGCL-DTA: Hybrid-scale Graph Contrastive Learning based Drug-Target Binding Affinity Prediction.

Hongyan Ye, Yingying Song, Binyu Wang, Lianlian Wu, Song He, Xiaochen Bo, Zhongnan Zhang

Proceedings of the 35th IEEE International Conference on Tools with Artificial Intelligence, 2023

Research on Student Classroom Attention Detection Based on Multi-Feature Fusion.

Jihu Sun, Long Ma, Song He, Qiushi Xi, Jun Hu

Proceedings of the Advances in Artificial Intelligence, Big Data and Algorithms - Proceedings of the 3rd International Conference on Artificial Intelligence, Big Data and Algorithms (CAIBDA 2023), 2023

Drug-target and Drug-disease Association Prediction based on Drug-target-disease Network and Multi-task Learning.

Binyu Wang, Yunhao Zhang, Hongyan Ye, Lianlian Wu, Song He, Xiaochen Bo, Zhongnan Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

MoSCHG: Multi-omics Single-cell Classification based on Heterogeneous Graphs and Supervised Contrastive Learning.

Xinjian Chen, Chenyang Xie, Yunhao Zhang, Song He, Xiaochen Bo, Zhongnan Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

A Multi-View Learning-Based Bayesian Ruleset Extraction Algorithm For Accurate Hepatotoxicity Prediction.

Siyang Chen, Lianlian Wu, Yong Xu, Kunhong Liu, Song He, Xiaochen Bo

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022

PLA-MoRe: A Protein-Ligand Binding Affinity Prediction Model via Comprehensive Molecular Representations.

Qingyu Li, Xiaochang Zhang, Lianlian Wu, Xiaochen Bo, Song He, Shengqi Wang

J. Chem. Inf. Model., 2022

Systematic optimization of host-directed therapeutic targets and preclinical validation of repositioned antiviral drugs.

Dafei Xie, Song He, Lu Han, Lianlian Wu, Hai Huang, Huan Tao, Pingkun Zhou, Xunlong Shi, Hui Bai, Xiaochen Bo

Briefings Bioinform., 2022

Machine learning methods, databases and tools for drug combination prediction.

Lianlian Wu, Yuqi Wen, Dongjin Leng, Qinglong Zhang, Chong Dai, Zhongming Wang, Ziqi Liu, Bowei Yan, Yixin Zhang, Jing Wang, Song He, Xiaochen Bo

Briefings Bioinform., 2022

Computational methods, databases and tools for synthetic lethality prediction.

Jing Wang, Qinglong Zhang, Junshan Han, Yanpeng Zhao, Caiyun Zhao, Bowei Yan, Chong Dai, Lianlian Wu, Yuqi Wen, Yixin Zhang, Dongjin Leng, Zhongming Wang, Xiaoxi Yang, Song He, Xiaochen Bo

Briefings Bioinform., 2022

DTI-HETA: prediction of drug-target interactions based on GCN and GAT on heterogeneous graph.

Kanghao Shao, Yunhao Zhang, Yuqi Wen, Zhongnan Zhang, Song He, Xiaochen Bo

Briefings Bioinform., 2022

An enhanced cascade-based deep forest model for drug combination prediction.

Weiping Lin, Lianlian Wu, Yixin Zhang, Yuqi Wen, Bowei Yan, Chong Dai, Kun-Hong Liu, Song He, Xiaochen Bo

Briefings Bioinform., 2022

A Multi-View Learning-Based Rule Extraction Algorithm For Accurate Hepatotoxicity Prediction.

Yuting Zhong, Bowei Yan, KunHong Liu, Yong Xu, Song He, Xiaochen Bo

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

NegStacking: Drug-Target Interaction Prediction Based on Ensemble Learning and Logistic Regression.

Jie Yang, Song He, Zhongnan Zhang, Xiaochen Bo

IEEE ACM Trans. Comput. Biol. Bioinform., 2021

COMSUC: A web server for the identification of consensus molecular subtypes of cancer based on multiple methods and multi-omics data.

Song He, Xinyu Song, Xiaoxi Yang, Jijun Yu, Yuqi Wen, Lianlian Wu, Bowei Yan, Jiannan Feng, Xiaochen Bo

PLoS Comput. Biol., 2021

Synthetic Lethal Interactions Prediction Based on Multiple Similarity Measures Fusion.

Lianlian Wu, Yuqi Wen, Xiaoxi Yang, Bowei Yan, Song He, Xiaochen Bo

J. Comput. Sci. Technol., 2021

Multi-dimensional data integration algorithm based on random walk with restart.

Yuqi Wen, Xinyu Song, Bowei Yan, Xiaoxi Yang, Lianlian Wu, Dongjin Leng, Song He, Xiaochen Bo

BMC Bioinform., 2021

An Adaptive Search Algorithm with Scatter and Tabu Strategy for Multidimensional Knapsack Problem.

Song He, Wei Li

Proceedings of the Exploration of Novel Intelligent Optimization Algorithms, 2021

A Metagraph-Based Model for Predicting Drug-Target Interaction on Heterogeneous Network.

Peng Ke, Yuqi Wen, Zhongnan Zhang, Song He, Xiaochen Bo

Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2021, 2021

Drug-target interaction prediction based on nonnegative and self-representative matrix factorization.

Yihua Ye, Yuxin Chen, Zhongnan Zhang, Yuqi Wen, Song He, Xiaochen Bo

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

Impact of Evaporated AuNP Thickness on Pseudo-MOS and Its Application in Direct MicroRNA-375 Detection.

Haihua Wang, Song He, Kai Xiao, Yu-Long Jiang, Jing Wan

Proceedings of the 14th IEEE International Conference on ASIC, 2021

2020

PIMD: An Integrative Approach for Drug Repositioning Using Multiple Characterization Fusion.

Song He, Yuqi Wen, Xiaoxi Yang, Zhen Liu, Xinyu Song, Xin Huang, Xiaochen Bo

Genom. Proteom. Bioinform., 2020

Domain-adversarial multi-task framework for novel therapeutic property prediction of compounds.

Lingwei Xie, Song He, Zhongnan Zhang, Kunhui Lin, Xiaochen Bo, Shu Yang, Boyuan Feng, Kun Wan, Kang Yang, Jie Yang, Yufei Ding

Bioinform., 2020

DTIGCCN: Prediction of drug-target interactions based on GCN and CNN.

Kanghao Shao, Zhongnan Zhang, Song He, Xiaochen Bo

Proceedings of the 32nd IEEE International Conference on Tools with Artificial Intelligence, 2020

2019

Steering Angle Measurement of UAV Navigation Based on Improved Image Processing.

Song He, Xingwu Chen, Mao-Hsiung Hung, Xiaoyong Chen, Yufeng Ji

J. Inf. Hiding Multim. Signal Process., 2019

2018

Study on A High-integrated Cloud-Based Customer Relationship Management System.

Emre Erturk, Song He

CoRR, 2018

Domain-Adversarial Multi-Task Framework for Novel Therapeutic Property Prediction of Compounds.

Lingwei Xie, Song He, Shu Yang, Boyuan Feng, Kun Wan, Zhongnan Zhang, Xiaochen Bo, Yufei Ding

CoRR, 2018

DTI-RCNN: New Efficient Hybrid Neural Network Model to Predict Drug-Target Interactions.

Xiaoping Zheng, Song He, Xinyu Song, Zhongnan Zhang, Xiaochen Bo

Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2018, 2018

Prediction of DTIs for high-dimensional and class-imbalanced data based on CGAN.

Kang Yang, Zhongnan Zhang, Song He, Xiaochen Bo

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

paraSNF: An Parallel Approach for Large-Scale Similarity Network Fusion.

Xiaolong Shen, Song He, Minquan Fang, Yuqi Wen, Xiaochen Bo, Yong Dou

Proceedings of the Advanced Computer Architecture - 12th Conference, 2018

2017

BNY Mellon Optimization Reduces Intraday Credit Risk by $1.4 Trillion.

Brian Blank, Erika Lunceford, John Morik, Song He, Madhusudan Rana, Pavithran Rajendran, Gnanadeeban Gnanapandithan, Katherine Lajoie, Boris Kats, Madangopal Revoor, Victor O'Laughlen, Prasad Lakshminarsimha Kompella

Interfaces, 2017

NFPscanner: a webtool for knowledge-based deciphering of biomedical networks.

Wenjian Xu, Yang Cao, Ziwei Xie, Haochen He, Song He, Hao Hong, Xiaochen Bo, Fei Li

BMC Bioinform., 2017

Drug - target interaction prediction with a deep-learning-based model.

Lingwei Xie, Zhongnan Zhang, Song He, Xiaochen Bo, Xinyu Song

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Application of data mining technology in TCM diagnosis and treatment.

Wenliang Chen, Song He

Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016

ICM: a web server for integrated clustering of multi-dimensional biomedical data.

Song He, Haochen He, Wenjian Xu, Xin Huang, Shuai Jiang, Fei Li, Fuchu He, Xiaochen Bo

Nucleic Acids Res., 2016

2015

Worms Propagation Modeling and Analysis in Big Data Environment.

Song He, Can Zhang, Wei Guo, Lidong Zhai

Int. J. Distributed Sens. Networks, 2015

2012

A novel secondary user assisted relay mechanism in cognitive radio networks with multiple primary users.

Song He, Lingge Jiang, Chen He

Proceedings of the 2012 IEEE Global Communications Conference, 2012

2010

Optimization of landscape ecological pattern in abandoned mines based on GIS.

Yanling Zhao, Heyu Zhang, Bing Chen, Song He

Proceedings of the 18th International Conference on Geoinformatics: GIScience in Change, 2010

2009

Component Library-Based ERP Software Development Methodology.

Song He, Huiyou Chang, Qing Wang

Proceedings of the International Conference on Interoperability for Enterprise Software and Applications China, 2009

2008

BSMDR: A B/S UI Framework Based on MDR.

Panxiang Zhang, Song He, Qing Wang, Huiyou Chang

Proceedings of the Enterprise Interoperability III, 2008

1996

Stabilizing the Richardson Algorithm by Controlling Chaos

Song He

CoRR, 1996