Sina Ghadermarzi

According to our database, Sina Ghadermarzi authored at least 6 papers between 2020 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Cell2Sentence: Teaching Large Language Models the Language of Biology.

Daniel LeVine, Syed Asad Rizvi, Sacha Lévy, Nazreen Pallikkavaliyaveetil, David Zhang, Xingyu Chen, Sina Ghadermarzi, Ruiming Wu, Zihe Zheng, Ivan Vrkic, Anna Zhong, Daphne Raskin, Insu Han, Antonio Henrique de Oliveira Fonseca, Josue Ortega Caro, Amin Karbasi, Rahul Madhav Dhodapkar, David van Dijk

Proceedings of the Forty-first International Conference on Machine Learning, 2024

2023

CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins.

Alessio Del Conte, Adel Bouhraoua, Mahta Mehdiabadi, Damiano Clementel, Alexander Miguel Monzon, Alex S. Holehouse, Daniel A. Griffith, Ryan J. Emenecker, Ashwini Patil, Ronesh Sharma, Tatsuhiko Tsunoda, Alok Sharma, Yi Jun Tang, Bin Liu, Claudio Mirabello, Björn Wallner, Burkhard Rost, Dagmar Ilzhöfer, Maria Littmann, Michael Heinzinger, Lea I M. Krautheimer, Michael Bernhofer, Liam J. McGuffin, Isabelle Callebaut, Tristan Bitard Feildel, Jian Liu, Jianlin Cheng, Zhiye Guo, Jinbo Xu, Sheng Wang, Nawar Malhis, Jörg Gsponer, Chol-Song Kim, Kun-Sop Han, Myong-Chol Ma, Lukasz A. Kurgan, Sina Ghadermarzi, Akila Katuwawala, Bi Zhao, Zhenling Peng, Zhonghua Wu, Gang Hu, Kui Wang, Md. Tamjidul Hoque, Md Wasi Ul Kabir, Michele Vendruscolo, Pietro Sormanni, Min Li, Fuhao Zhang, Pengzhen Jia, Yida Wang, Michail Yu. Lobanov, Oxana V. Galzitskaya, Wim F. Vranken, Adrián Díaz, Thomas Litfin, Yaoqi Zhou, Jack Hanson, Kuldip K. Paliwal, Zsuzsanna Dosztányi, Gábor Erdös, Silvio C. E. Tosatto, Damiano Piovesan

Nucleic Acids Res., July, 2023

2021

XRRpred: accurate predictor of crystal structure quality from protein sequence.

Sina Ghadermarzi, Bartosz Krawczyk, Jiangning Song, Lukasz A. Kurgan

Bioinform., 2021

DNAgenie: accurate prediction of DNA-type-specific binding residues in protein sequences.

Jian Zhang, Sina Ghadermarzi, Akila Katuwawala, Lukasz A. Kurgan

Briefings Bioinform., 2021

2020

Prediction of protein-binding residues: dichotomy of sequence-based methods developed using structured complexes versus disordered proteins.

Jian Zhang, Sina Ghadermarzi, Lukasz A. Kurgan

Bioinform., 2020

Disordered Function Conjunction: On the In-Silico Function Annotation of Intrinsically DisorderedRegions.

Sina Ghadermarzi, Akila Katuwawala, Christopher J. Oldfield, Amita Barik, Lukasz A. Kurgan

Proceedings of the Pacific Symposium on Biocomputing 2020, 2020