Simone Marini
Orcid: 0000-0003-0665-7815
According to our database1,
Simone Marini
authored at least 65 papers
between 2000 and 2025.
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Bibliography
2025
Future Gener. Comput. Syst., 2025
2024
Automated species classification and counting by deep-sea mobile crawler platforms using YOLO.
Ecol. Informatics, 2024
Forecasting dominance of SARS-CoV-2 lineages by anomaly detection using deep AutoEncoders.
Briefings Bioinform., 2024
Proceedings of the Digital Health and Informatics Innovations for Sustainable Health Care Systems, 2024
An Average-Case Efficient Two-Stage Algorithm for Enumerating All Longest Common Substrings of Minimum Length $k$ Between Genome Pairs.
Proceedings of the 12th IEEE International Conference on Healthcare Informatics, 2024
Learning on Forecasting HIV Epidemic Based on Individuals' Contact Networks.
Proceedings of the 17th International Joint Conference on Biomedical Engineering Systems and Technologies, 2024
2023
MEGARes and AMR++, v3.0: an updated comprehensive database of antimicrobial resistance determinants and an improved software pipeline for classification using high-throughput sequencing.
Nucleic Acids Res., January, 2023
Correction: Lopez-Vazquez et al. Video Image Enhancement and Machine Learning Pipeline for Underwater Animal Detection and Classification at Cabled Observatories. Sensors 2020, 20, 726.
Sensors, 2023
Optimizing Dynamic Antibiotic Treatment Strategies against Invasive Methicillin-Resistant Staphylococcus Aureus Infections using Causal Survival Forests and G-Formula on Statewide Electronic Health Record Data.
Proceedings of the KDD'23 Workshop on Causal Discovery, 2023
2022
Joint Application of the Target Trial Causal Framework and Machine Learning Modeling to Optimize Antibiotic Therapy: Use Case on Acute Bacterial Skin and Skin Structure Infections due to Methicillin-resistant Staphylococcus aureus.
CoRR, 2022
Optimizing viral genome subsampling by genetic diversity and temporal distribution (TARDiS) for phylogenetics.
Bioinform., 2022
Towards routine employment of computational tools for antimicrobial resistance determination via high-throughput sequencing.
Briefings Bioinform., 2022
Assessing putative bias in prediction of anti-microbial resistance from real-world genotyping data under explicit causal assumptions.
Artif. Intell. Medicine, 2022
Dynamic Prediction of Non-Neutral SARS-Cov-2 Variants Using Incremental Machine Learning.
Proceedings of the Challenges of Trustable AI and Added-Value on Health, 2022
Identification of Social and Racial Disparities in Risk of HIV Infection in Florida using Causal AI Methods.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022
Transmission cluster characteristics of global, regional, and lineage-specific SARS-CoV-2 phylogenies.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022
2021
Sensors, 2021
BMC Bioinform., 2021
KARGA: Multi-platform Toolkit for k-mer-based Antibiotic Resistance Gene Analysis of High-throughput Sequencing Data.
Proceedings of the IEEE EMBS International Conference on Biomedical and Health Informatics, 2021
2020
An Automated Pipeline for Image Processing and Data Treatment to Track Activity Rhythms of Paragorgia arborea in Relation to Hydrographic Conditions.
Sensors, 2020
Video Image Enhancement and Machine Learning Pipeline for Underwater Animal Detection and Classification at Cabled Observatories.
Sensors, 2020
Towards Naples Ecological REsearch for Augmented Observatories (NEREA): The NEREA-Fix Module, a Stand-Alone Platform for Long-Term Deep-Sea Ecosystem Monitoring.
Sensors, 2020
The Hierarchic Treatment of Marine Ecological Information from Spatial Networks of Benthic Platforms.
Sensors, 2020
A Flexible Autonomous Robotic Observatory Infrastructure for Bentho-Pelagic Monitoring.
Sensors, 2020
2019
Toward more accurate prediction of caspase cleavage sites: a comprehensive review of current methods, tools and features.
Briefings Bioinform., 2019
Proceedings of the International Joint Conference on Neural Networks, 2019
A Semi-supervised Learning Approach for Pan-Cancer Somatic Genomic Variant Classification.
Proceedings of the Artificial Intelligence in Medicine, 2019
2018
J. Biomed. Informatics, 2018
2017
Bioinform., 2017
2016
Looking inside the Ocean: Toward an Autonomous Imaging System for Monitoring Gelatinous Zooplankton.
Sensors, 2016
Learning T2D Evolving Complexity from EMR and Administrative Data by Means of Continuous Time Bayesian Networks.
Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2016), 2016
2015
A Dynamic Bayesian Network model for long-term simulation of clinical complications in type 1 diabetes.
J. Biomed. Informatics, 2015
BMC Bioinform., 2015
Proceedings of the 2015 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, 2015
A Genomic Data Fusion Framework to Exploit Rare and Common Variants for Association Discovery.
Proceedings of the Artificial Intelligence in Medicine, 2015
2014
Automated Video Imaging System for Counting Deep-Sea Bioluminescence Organisms Events.
Proceedings of the 2014 ICPR Workshop on Computer Vision for Analysis of Underwater Imagery, 2014
Proceedings of the 2014 ICPR Workshop on Computer Vision for Analysis of Underwater Imagery, 2014
2012
Proceedings of the Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, 2012
2011
Vis. Comput., 2011
The CHRONIOUS Ontology-Driven Search Tool: Enabling Access to Focused and Up-to-Date Healthcare Literature
CoRR, 2011
Proceedings of the On the Move to Meaningful Internet Systems: OTM 2011 Workshops, 2011
2010
Int. J. Comput. Vis., 2010
Proceedings of the 3rd Eurographics Workshop on 3D Object Retrieval, 2010
Proceedings of the 3rd Eurographics Workshop on 3D Object Retrieval, 2010
2009
Proceedings of the Sixth IEEE International Conference on Advanced Video and Signal Based Surveillance, 2009
Proceedings of the 2nd Eurographics Workshop on 3D Object Retrieval, 2009
2008
Proceedings of the 2008 International Conference on Shape Modeling and Applications (SMI 2008), 2008
2007
IEEE Computer Graphics and Applications, 2007
Proceedings of the Semantic Multimedia, 2007
Proceedings of the 28th Annual Conference of the European Association for Computer Graphics, 2007
2006
Comput. Aided Des., 2006
Proceedings of the Multimedia Content Representation, 2006
Proceedings of the Fourth Eurographics Italian Chapter Conference 2006, 2006
Proceedings of the Content-Based Retrieval, 23.04. - 28.04.2006, 2006
Proceedings of the Content-Based Retrieval, 23.04. - 28.04.2006, 2006
2005
Int. J. Comput. Appl. Technol., 2005
Proceedings of the Graph-Based Representations in Pattern Recognition, 2005
2003
Proceedings of the 2003 International Conference on Shape Modeling and Applications (SMI 2003), 2003
Proceedings of the Discrete Geometry for Computer Imagery, 11th International Conference, 2003
2000
HEMASL: A Flexible Language to Specify Heterogeneous Agents.
Proceedings of the WOA 2000: Dagli Oggetti agli Agenti. 1st AI*IA/TABOO Joint Workshop "From Objects to Agents": Evolutive Trends of Software Systems, 2000
Proceedings of the Intelligent Agents VII. Agent Theories Architectures and Languages, 2000