Simon Tavaré

According to our database, Simon Tavaré authored at least 28 papers between 1992 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Gradient Estimation for Binary Latent Variables via Gradient Variance Clipping.

Russell Z. Kunes, Mingzhang Yin, Max Land, Doron Haviv, Dana Pe'er, Simon Tavaré

Proceedings of the Thirty-Seventh AAAI Conference on Artificial Intelligence, 2023

2022

A note on the Screaming Toes game.

Simon Tavaré

J. Appl. Probab., 2022

2016

HDTD: analyzing multi-tissue gene expression data.

Anestis Touloumis, John C. Marioni, Simon Tavaré

Bioinform., 2016

2014

Flexible analysis of RNA-seq data using mixed effects models.

Ernest Turro, William J. Astle, Simon Tavaré

Bioinform., 2014

Normalization of metabolomics data with applications to correlation maps.

Alexandra Jauhiainen, Basetti Madhu, Masako Narita, Masashi Narita, John Griffiths, Simon Tavaré

Bioinform., 2014

2013

Automated quantification of the schooling behaviour of sticklebacks.

Reza Ardekani, Anna K. Greenwood, Catherine L. Peichel, Simon Tavaré

EURASIP J. Image Video Process., 2013

2011

Modeling Evolutionary Dynamics of Epigenetic Mutations in Hierarchically Organized Tumors.

Andrea Sottoriva, Louis Vermeulen, Simon Tavaré

PLoS Comput. Biol., 2011

BayesPeak - an R package for analysing ChIP-seq data.

Jonathan M. Cairns, Christiana Spyrou, Rory Stark, Mike L. Smith, Andy G. Lynch, Simon Tavaré

Bioinform., 2011

2010

Identification and correction of previously unreported spatial phenomena using raw Illumina BeadArray data.

Mike L. Smith, Mark J. Dunning, Simon Tavaré, Andy G. Lynch

BMC Bioinform., 2010

Data analysis issues for allele-specific expression using Illumina's GoldenGate assay.

Matthew E. Ritchie, Matthew S. Forrest, Antigone S. Dimas, Caroline Daelemans, Emmanouil T. Dermitzakis, Panagiotis Deloukas, Simon Tavaré

BMC Bioinform., 2010

CNAnova: a new approach for finding recurrent copy number abnormalities in cancer SNP microarray data.

Sergii Ivakhno, Simon Tavaré

Bioinform., 2010

CNAseg - a novel framework for identification of copy number changes in cancer from second-generation sequencing data.

Sergii Ivakhno, Tom Royce, Anthony J. Cox, Dirk J. Evers, R. Keira Cheetham, Simon Tavaré

Bioinform., 2010

Integrating Approximate Bayesian Computation with Complex Agent-Based Models for Cancer Research.

Andrea Sottoriva, Simon Tavaré

Proceedings of the 19th International Conference on Computational Statistics, 2010

2009

Finding Behavioral Motifs in Fly Trajectories.

Dhruv Grover, Simon Tavaré

Commun. Inf. Syst., 2009

BayesPeak: Bayesian analysis of ChIP-seq data.

Christiana Spyrou, Rory Stark, Andy G. Lynch, Simon Tavaré

BMC Bioinform., 2009

Strategies for analyzing highly enriched IP-chip datasets.

Simon R. V. Knott, Christopher J. Viggiani, Oscar M. Aparicio, Simon Tavaré

BMC Bioinform., 2009

R/Bioconductor software for Illumina's Infinium whole-genome genotyping BeadChips.

Matthew E. Ritchie, Benilton S. Carvalho, Kurt N. Hetrick, Simon Tavaré, Rafael A. Irizarry

Bioinform., 2009

2008

Statistical issues in the analysis of Illumina data.

Mark J. Dunning, Nuno L. Barbosa-Morais, Andy G. Lynch, Simon Tavaré, Matthew E. Ritchie

BMC Bioinform., 2008

2007

The Stem Cell Population of the Human Colon Crypt: Analysis via Methylation Patterns.

Pierre Nicolas, Kyoung-Mee Kim, Darryl Shibata, Simon Tavaré

PLoS Comput. Biol., 2007

Using expression arrays for copy number detection: an example from E. coli.

Dmitriy Skvortsov, Diana Abdueva, Michael E. Stitzer, Steven E. Finkel, Simon Tavaré

BMC Bioinform., 2007

beadarray: R classes and methods for Illumina bead-based data.

Mark J. Dunning, Mike L. Smith, Matthew E. Ritchie, Simon Tavaré

Bioinform., 2007

2006

A Tale of Three Couplings: Poisson-Dirichlet and GEM Approximations for Random Permutations.

Richard Arratia, Andrew D. Barbour, Simon Tavaré

Comb. Probab. Comput., 2006

BioHMM: a heterogeneous hidden Markov model for segmenting array CGH data.

John C. Marioni, Natalie P. Thorne, Simon Tavaré

Bioinform., 2006

2001

A Model for Phylogenetic Inference Using Structural and Chemical Covariates.

Simon Tavaré, Dean C. Adams, Olivier Fedrigo, Gavin J. P. Naylor

Proceedings of the 6th Pacific Symposium on Biocomputing, 2001

2000

The Effect of Nonhomogeneous Clone Length Distribution on the Progress of an STS Mapping Project.

Sophie Schbath, Nathalie Bossard, Simon Tavaré

J. Comput. Biol., 2000

1999

The Poisson-Dirichlet Distribution And The Scale-Invariant Poisson Process.

Richard Arratia, Andrew D. Barbour, Simon Tavaré

Comb. Probab. Comput., 1999

1994

A Rate for the Erdös-Turán Law.

Andrew D. Barbour, Simon Tavaré

Comb. Probab. Comput., 1994

1992

Limit Theorems for Combinatorial Structures via Discrete Process Approximations.

Richard Arratia, Simon Tavaré

Random Struct. Algorithms, 1992