Simon Penel

According to our database, Simon Penel authored at least 10 papers between 2003 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Thirdkind: displaying phylogenetic encounters beyond 2-level reconciliation.

Simon Penel, Hugo Menet, Théo Tricou, Vincent Daubin, Eric Tannier

Bioinform., 2022

2020

Treerecs: an integrated phylogenetic tool, from sequences to reconciliations.

Nicolas Comte, Benoit Morel, Damir Hasic, Laurent Guéguen, Bastien Boussau, Vincent Daubin, Simon Penel, Céline Scornavacca, Manolo Gouy, Alexandros Stamatakis, Eric Tannier, David P. Parsons

Bioinform., 2020

2012

High-quality sequence clustering guided by network topology and multiple alignment likelihood.

Vincent Miele, Simon Penel, Vincent Daubin, Franck Picard, Daniel Kahn, Laurent Duret

Bioinform., 2012

2011

PhEVER: a database for the global exploration of virus-host evolutionary relationships.

Leonor Palmeira, Simon Penel, Vincent Lotteau, Chantal Rabourdin-Combe, Christian Gautier

Nucleic Acids Res., 2011

Ultra-fast sequence clustering from similarity networks with SiLiX.

Vincent Miele, Simon Penel, Laurent Duret

BMC Bioinform., 2011

2009

Databases of homologous gene families for comparative genomics.

Simon Penel, Anne-Muriel Arigon, Jean-François Dufayard, Anne-Sophie Sertier, Vincent Daubin, Laurent Duret, Manolo Gouy, Guy Perrière

BMC Bioinform., 2009

2005

Integr8 and Genome Reviews: integrated views of complete genomes and proteomes.

Paul J. Kersey, Lawrence Bower, Lorna Morris, Alan Horne, Robert Petryszak, Carola Kanz, Alexander Kanapin, Ujjwal Das, Karine Michoud, Isabelle Phan, Alexandre Gattiker, Tamara Kulikova, Nadeem Faruque, Karyn Duggan, Peter McLaren, Britt Reimholz, Laurent Duret, Simon Penel, Ingmar Reuter, Rolf Apweiler

Nucleic Acids Res., 2005

Polymorphix: a sequence polymorphism database.

Eric Bazin, Laurent Duret, Simon Penel, Nicolas Galtier

Nucleic Acids Res., 2005

Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases.

Jean-François Dufayard, Laurent Duret, Simon Penel, Manolo Gouy, François Rechenmann, Guy Perrière

Bioinform., 2005

2003

Integrated databanks access and sequence/structure analysis services at the PBIL.

Guy Perrière, Christophe Combet, Simon Penel, Christophe Blanchet, Jean Thioulouse, Christophe Geourjon, Julien Grassot, Céline Charavay, Manolo Gouy, Laurent Duret, Gilbert Deléage

Nucleic Acids Res., 2003