Sheng Zhong

Orcid: 0000-0001-6419-7453

Affiliations:
  • University of California San Diego, Department of Bioengineering, La Jolla, CA, USA


According to our database1, Sheng Zhong authored at least 16 papers between 2003 and 2019.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of five.

Timeline

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Legend:

Book 
In proceedings 
Article 
PhD thesis 
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Links

Online presence:

On csauthors.net:

Bibliography

2019
EpiAlignment: alignment with both DNA sequence and epigenomic data.
Nucleic Acids Res., 2019

2018
A likelihood approach to testing hypotheses on the co-evolution of epigenome and genome.
PLoS Comput. Biol., 2018

GITAR: An Open Source Tool for Analysis and Visualization of Hi-C Data.
Genom. Proteom. Bioinform., 2018

2016
GeNemo: a search engine for web-based functional genomic data.
Nucleic Acids Res., 2016

2013
Understanding Variation in Transcription Factor Binding by Modeling Transcription Factor Genome-Epigenome Interactions.
PLoS Comput. Biol., 2013

Enabling interspecies epigenomic comparison with CEpBrowser.
Bioinform., 2013

2011
Towards an Evolutionary Model of Transcription Networks.
PLoS Comput. Biol., 2011

Mapping personal functional data to personal genomes.
Bioinform., 2011

2010
Modeling Co-Expression across Species for Complex Traits: Insights to the Difference of Human and Mouse Embryonic Stem Cells.
PLoS Comput. Biol., 2010

Network-based comparison of temporal gene expression patterns.
Bioinform., 2010

2009
Dissecting Early Differentially Expressed Genes in a Mixture of Differentiating Embryonic Stem Cells.
PLoS Comput. Biol., 2009

2005
Ubic2 - Towards Ubiquitous Bio-Information Computing: Data Protocols, Middleware, and Web Services for Heterogeneous Biological Information Integration and Retrieval.
Int. J. Softw. Eng. Knowl. Eng., 2005

2004
In silico prediction of transcription factors that interact with the E2F family of transcription factors.
Proceedings of the 8th International Conference on Control, 2004

Comparative Analysis of Gene Sets in the Gene Ontology Space under the Multiple Hypothesis Testing Framework.
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

Towards Ubiquitous Bio-Information Computing: Data Protocols, Middleware, and Web Services for Heterogeneous Biological Information Integration and Retrieval.
Proceedings of the 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 2004

2003
ChipInfo: software for extracting gene annotation and gene ontology information for microarray analysis.
Nucleic Acids Res., 2003


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