Sheeba Samuel

According to our database, Sheeba Samuel authored at least 32 papers between 2017 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Enhancing Explainability in Multimodal Large Language Models Using Ontological Context.

Jihen Amara, Birgitta König-Ries, Sheeba Samuel

CoRR, 2024

Evaluating the method reproducibility of deep learning models in the biodiversity domain.

Waqas Ahmed, Vamsi Krishna Kommineni, Birgitta König-Ries, Jitendra Gaikwad, Luiz M. R. Gadelha Jr., Sheeba Samuel

CoRR, 2024

FAIR Jupyter: a knowledge graph approach to semantic sharing and granular exploration of a computational notebook reproducibility dataset.

Sheeba Samuel, Daniel Mietchen

CoRR, 2024

From human experts to machines: An LLM supported approach to ontology and knowledge graph construction.

Vamsi Krishna Kommineni, Birgitta König-Ries, Sheeba Samuel

CoRR, 2024

Integrating Domain Knowledge for Enhanced Concept Model Explainability in Plant Disease Classification.

Jihen Amara, Sheeba Samuel, Birgitta König-Ries

Proceedings of the Semantic Web - 21st International Conference, 2024

2023

Reproducible Domain-Specific Knowledge Graphs in the Life Sciences: a Systematic Literature Review.

Samira Babalou, Sheeba Samuel, Birgitta König-Ries

CoRR, 2023

Concept Explainability for Plant Diseases Classification.

Jihen Amara, Birgitta König-Ries, Sheeba Samuel

Proceedings of the 18th International Joint Conference on Computer Vision, 2023

The role of ontology matching in ontology network development.

Sheeba Samuel, Birgitta König-Ries, Alsayed Algergawy

Proceedings of the 18th International Workshop on Ontology Matching co-located with the 22nd International Semantic Web Conference (ISWC 2023), 2023

MLProvCodeGen: A Tool for Provenance Data Input and Capture of Customizable Machine Learning Scripts.

Tarek Al Mustafa, Birgitta König-Ries, Sheeba Samuel

Proceedings of the Datenbanksysteme für Business, 2023

MLProvLab: Provenance Management for Data Science Notebooks.

Dominik Kerzel, Birgitta König-Ries, Sheeba Samuel

Proceedings of the Datenbanksysteme für Business, 2023

2022

BiodivNERE: Gold Standard Corpora for Named Entity Recognition and Relation Extraction in Biodiversity Domain.

Nora Abdelmageed, Felicitas Löffler, Leila Feddoul, Alsayed Algergawy, Sheeba Samuel, Jitendra Gaikwad, Anahita Kazem, Birgitta König-Ries

Dataset, April, 2022

BiodivNERE: Gold Standard Corpora for Named Entity Recognition and Relation Extraction in Biodiversity Domain.

Nora Abdelmageed, Felicitas Löffler, Leila Feddoul, Alsayed Algergawy, Sheeba Samuel, Jitendra Gaikwad, Anahita Kazem, Birgitta König-Ries

Dataset, April, 2022

A collaborative semantic-based provenance management platform for reproducibility.

Sheeba Samuel, Birgitta König-Ries

PeerJ Comput. Sci., 2022

Computational reproducibility of Jupyter notebooks from biomedical publications.

Sheeba Samuel, Daniel Mietchen

CoRR, 2022

End-to-End provenance representation for the understandability and reproducibility of scientific experiments using a semantic approach.

Sheeba Samuel, Birgitta König-Ries

J. Biomed. Semant., 2022

Toward a Framework for Integrative, FAIR, and Reproducible Management of Data on the Dynamic Balance of Microbial Communities.

Luiz M. R. Gadelha Jr., Martin Hohmuth, Mahnoor Zulfiqar, David Schöne, Sheeba Samuel, Maria Sorokina, Christoph Steinbeck, Birgitta König-Ries

Proceedings of the 18th IEEE International Conference on e-Science, 2022

2021

fusion-jena/BiodivOnto: P&D_ESWC2021.

Nora Abdelmageed, Alsayed Algergawy, Sheeba Samuel, Birgitta König-Ries

Dataset, May, 2021

Towards an Ontology Network for the Reproducibility of Scientific Studies.

Sheeba Samuel, Alsayed Algergawy, Birgitta König-Ries

Proceedings of the Joint Ontology Workshops 2021 Episode VII: The Bolzano Summer of Knowledge co-located with the 12th International Conference on Formal Ontology in Information Systems (FOIS 2021), 2021

A Data-driven Approach for Core Biodiversity Ontology Development.

Nora Abdelmageed, Alsayed Algergawy, Sheeba Samuel, Birgitta König-Ries

Proceedings of the Joint Ontology Workshops 2021 Episode VII: The Bolzano Summer of Knowledge co-located with the 12th International Conference on Formal Ontology in Information Systems (FOIS 2021), 2021

Machine Learning Pipelines: Provenance, Reproducibility and FAIR Data Principles.

Sheeba Samuel, Frank Löffler, Birgitta König-Ries

Proceedings of the Provenance and Annotation of Data and Processes, 2021

ReproduceMeGit: A Visualization Tool for Analyzing Reproducibility of Jupyter Notebooks.

Sheeba Samuel, Birgitta König-Ries

Proceedings of the Provenance and Annotation of Data and Processes, 2021

Towards Tracking Provenance from Machine Learning Notebooks.

Dominik Kerzel, Sheeba Samuel, Birgitta König-Ries

Proceedings of the 13th International Joint Conference on Knowledge Discovery, 2021

BiodivOnto: Towards a Core Ontology for Biodiversity.

Nora Abdelmageed, Alsayed Algergawy, Sheeba Samuel, Birgitta König-Ries

Proceedings of the Semantic Web: ESWC 2021 Satellite Events, 2021

Capturing and Semantically Describing Provenance to Tell the Story of R Scripts.

Maria Luiza Mondelli, Sheeba Samuel, Birgitta König-Ries, Luiz M. R. Gadelha Jr.

Proceedings of the 17th IEEE International Conference on eScience, 2021

2020

fusion-jena/ReproducibilitySurvey: ReproducibilitySurvey 0.1.

Sheeba Samuel, Birgitta König-Ries

Dataset, May, 2020

2019

A provenance-based semantic approach to support understandability, reproducibility, and reuse of scientific experiments.

Sheeba Samuel

PhD thesis, 2019

2018

The Story of an experiment: a provenance-based semantic approach towards research reproducibility.

Sheeba Samuel, Kathrin Groeneveld, Frank Taubert, Daniel Walther, Tom Kache, Teresa Langenstück, Birgitta König-Ries, H. Martin Bücker, Christoph Biskup

Proceedings of the 11th International Conference Semantic Web Applications and Tools for Life Sciences, 2018

ProvBook: Provenance-based Semantic Enrichment of Interactive Notebooks for Reproducibility.

Sheeba Samuel, Birgitta König-Ries

Proceedings of the ISWC 2018 Posters & Demonstrations, Industry and Blue Sky Ideas Tracks co-located with 17th International Semantic Web Conference (ISWC 2018), Monterey, USA, October 8th - to, 2018

Combining P-Plan and the REPRODUCE-ME Ontology to Achieve Semantic Enrichment of Scientific Experiments Using Interactive Notebooks.

Sheeba Samuel, Birgitta König-Ries

Proceedings of the Semantic Web: ESWC 2018 Satellite Events, 2018

2017

Towards Reproducibility of Microscopy Experiments.

Sheeba Samuel, Frank Taubert, Daniel Walther, Birgitta König-Ries, H. Martin Bücker

D Lib Mag., 2017

REPRODUCE-ME: Ontology-Based Data Access for Reproducibility of Microscopy Experiments.

Sheeba Samuel, Birgitta König-Ries

Proceedings of the Semantic Web: ESWC 2017 Satellite Events - ESWC 2017 Satellite Events, Portorož, Slovenia, May 28, 2017

Integrative Data Management for Reproducibility of Microscopy Experiments.

Sheeba Samuel

Proceedings of the Semantic Web - 14th International Conference, 2017