Shayn M. Peirce

According to our database, Shayn M. Peirce authored at least 12 papers between 2006 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Spatial transcriptome-guided multi-scale framework connects P. aeruginosa metabolic states to oxidative stress biofilm microenvironment.

Tracy J. Kuper, Mohammad Mazharul Islam, Shayn M. Peirce-Cottler, Jason A. Papin, Roseanne M. Ford

PLoS Comput. Biol., 2024

2023

Whole-cell modeling of E. coli colonies enables quantification of single-cell heterogeneity in antibiotic responses.

Christopher J. Skalnik, Sean Y. Cheah, Mica Y. Yang, Mattheus B. Wolff, Ryan K. Spangler, Lee Talman, Jerry H. Morrison, Shayn M. Peirce, Eran Agmon, Markus W. Covert

PLoS Comput. Biol., 2023

Correction: A computational modeling approach for predicting multicell spheroid patterns based on signaling-induced differential adhesion.

Nikita Sivakumar, Helen V. Warner, Shayn M. Peirce, Matthew Lazzara

PLoS Comput. Biol., 2023

2022

A computational modeling approach for predicting multicell spheroid patterns based on signaling-induced differential adhesion.

Nikita Sivakumar, Helen V. Warner, Shayn M. Peirce, Matthew Lazzara

PLoS Comput. Biol., November, 2022

Combining Machine Learning and Agent-Based Modeling to Study Biomedical Systems.

Nikita Sivakumar, Cameron Mura, Shayn M. Peirce

CoRR, 2022

Vivarium: an interface and engine for integrative multiscale modeling in computational biology.

Eran Agmon, Ryan K. Spangler, Christopher J. Skalnik, William Poole, Shayn M. Peirce, Jerry H. Morrison, Markus W. Covert

Bioinform., 2022

2021

Agent-based model provides insight into the mechanisms behind failed regeneration following volumetric muscle loss injury.

Amanda M. Westman, Shayn M. Peirce, George J. Christ, Silvia S. Blemker

PLoS Comput. Biol., 2021

2019

CIRCOAST: a statistical hypothesis test for cellular colocalization with network structures.

Bruce A. Corliss, H. Clifton Ray, James T. Patrie, Jennifer Mansour, Sam Kesting, Janice H. Park, Gustavo K. Rohde, Paul A. Yates, Kevin A. Janes, Shayn M. Peirce

Bioinform., 2019

2009

Agent-Based Model of Therapeutic Adipose-Derived Stromal Cell Trafficking during Ischemia Predicts Ability To Roll on P-Selectin.

Alexander M. Bailey, Michael B. Lawrence, Hulan Shang, Adam J. Katz, Shayn M. Peirce

PLoS Comput. Biol., 2009

2007

Multiscale computational analysis of Xenopus laevis morphogenesis reveals key insights of systems-level behavior.

Scott H. Robertson, Chris K. Smith, Anna L. Langhans, Sara E. McLinden, Matthew A. Oberhardt, Karoly R. Jakab, Bette Dzamba, Douglas W. DeSimone, Jason A. Papin, Shayn M. Peirce

BMC Syst. Biol., 2007

Combining experiments with multi-cell agent-based modeling to study biological tissue patterning.

Bryan C. Thorne, Alexander M. Bailey, Shayn M. Peirce

Briefings Bioinform., 2007

2006

Multiscale biosystems integration: Coupling intracellular network analysis with tissue-patterning simulations.

Shayn M. Peirce, Thomas C. Skalak, Jason A. Papin

IBM J. Res. Dev., 2006