Shawn M. Gomez

Orcid: 0000-0002-8251-4552

According to our database1, Shawn M. Gomez authored at least 15 papers between 2000 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Utilizing Low-Dimensional Molecular Embeddings for Rapid Chemical Similarity Search.
Proceedings of the Advances in Information Retrieval, 2024

SALSA: Semantically-Aware Latent Space Autoencoder.
Proceedings of the Thirty-Eighth AAAI Conference on Artificial Intelligence, 2024

2023
Kinome inhibition states and multiomics data enable prediction of cell viability in diverse cancer types.
PLoS Comput. Biol., February, 2023

2022
EMBER: multi-label prediction of kinase-substrate phosphorylation events through deep learning.
Bioinform., 2022

2021
The Dark Kinase Knowledgebase: an online compendium of knowledge and experimental results of understudied kinases.
Nucleic Acids Res., 2021

2013
The Focal Adhesion Analysis Server: a web tool for analyzing focal adhesion dynamics.
F1000Research, 2013

2011
A Whole-Body Model for Glycogen Regulation Reveals a Critical Role for Substrate Cycling in Maintaining Blood Glucose Homeostasis.
PLoS Comput. Biol., 2011

2010
Enhancing metabolomic data analysis with Progressive Consensus Alignment of NMR Spectra (PCANS).
BMC Bioinform., 2010

2009
Comparison of phylogenetic trees through alignment of embedded evolutionary distances.
BMC Bioinform., 2009

2003
Learning to predict protein-protein interactions from protein sequences.
Bioinform., 2003

2002
Towards the Prediction of Complete Protein-Protein Interaction Networks.
Proceedings of the 7th Pacific Symposium on Biocomputing, 2002

Of truth and pathways: chasing bits of information through myriads of articles.
Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, 2002

2001
Birth of scale-free molecular networks and the number of distinct DNA and protein domains per genome.
Bioinform., 2001

GeneWays: A System for Mining Text and for Integrating Data on Molecular Pathways.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001

2000
A knowledge model for analysis and simulation of regulatory networks.
Bioinform., 2000


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