Serguei V. S. Pakhomov
Orcid: 0000-0001-8113-4788
According to our database1,
Serguei V. S. Pakhomov
authored at least 120 papers
between 1999 and 2024.
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Bibliography
2024
Useful blunders: Can automated speech recognition errors improve downstream dementia classification?
J. Biomed. Informatics, 2024
Reexamining Racial Disparities in Automatic Speech Recognition Performance: The Role of Confounding by Provenance.
CoRR, 2024
Too Big to Fail: Larger Language Models are Disproportionately Resilient to Induction of Dementia-Related Linguistic Anomalies.
Proceedings of the Findings of the Association for Computational Linguistics, 2024
2023
The Power of Speech in the Wild: Discriminative Power of Daily Voice Diaries in Understanding Auditory Verbal Hallucinations Using Deep Learning.
Proc. ACM Interact. Mob. Wearable Ubiquitous Technol., September, 2023
Enhancing Robustness of Foundation Model Representations under Provenance-related Distribution Shifts.
CoRR, 2023
Backdoor Adjustment of Confounding by Provenance for Robust Text Classification of Multi-institutional Clinical Notes.
CoRR, 2023
A Dialogue System for Assessing Activities of Daily Living: Improving Consistency with Grounded Knowledge.
CoRR, 2023
TRESTLE: Toolkit for Reproducible Execution of Speech, Text and Language Experiments.
CoRR, 2023
Automated Neural Nursing Assistant (ANNA): An Over-The-Phone System for Cognitive Monitoring.
Proceedings of the 24th Annual Conference of the International Speech Communication Association, 2023
2022
BMC Medical Informatics Decis. Mak., 2022
Fully automated detection of formal thought disorder with Time-series Augmented Representations for Detection of Incoherent Speech (TARDIS).
J. Biomed. Informatics, 2022
The Far Side of Failure: Investigating the Impact of Speech Recognition Errors on Subsequent Dementia Classification.
CoRR, 2022
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022
GPT-D: Inducing Dementia-related Linguistic Anomalies by Deliberate Degradation of Artificial Neural Language Models.
Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 2022
2021
Are synthetic clinical notes useful for real natural language processing tasks: A case study on clinical entity recognition.
J. Am. Medical Informatics Assoc., 2021
NLP Methods for Extraction of Symptoms from Unstructured Data for Use in Prognostic COVID-19 Analytic Models.
J. Artif. Intell. Res., 2021
Crossing the "Cookie Theft" Corpus Chasm: Applying What BERT Learns From Outside Data to the ADReSS Challenge Dementia Detection Task.
Frontiers Comput. Sci., 2021
An Empirical Study of UMLS Concept Extraction from Clinical Notes using Boolean Combination Ensembles.
CoRR, 2021
Proceedings of the 9th IEEE International Conference on Healthcare Informatics, 2021
Proceedings of the 16th Conference of the European Chapter of the Association for Computational Linguistics: System Demonstrations, 2021
2020
Proceedings of the Precision Health and Medicine - A Digital Revolution in Healthcare, 2020
J. Am. Medical Informatics Assoc., 2020
Proceedings of the First Workshop on Artificial Intelligence for Function, Disability, and Health co-located with the 2020 International Joint Conference on Artificial Intelligence, 2020
Proceedings of the 8th IEEE International Conference on Healthcare Informatics, 2020
Proceedings of the AMIA 2020, 2020
Comparing NLP Systems to Extract Entities of Eligibility Criteria in Dietary Supplements Clinical Trials Using NLP-ADAPT.
Proceedings of the Artificial Intelligence in Medicine, 2020
A Tale of Two Perplexities: Sensitivity of Neural Language Models to Lexical Retrieval Deficits in Dementia of the Alzheimer's Type.
Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics, 2020
2019
BMC Medical Informatics Decis. Mak., 2019
Challenges and Opportunities to Improve the Clinician Experience Reviewing Electronic Progress Notes.
Appl. Clin. Inform., 2019
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019
Recurrent Deep Network Models for Clinical NLP Tasks: Use Case with Sentence Boundary Disambiguation.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019
2018
CLAMP - a toolkit for efficiently building customized clinical natural language processing pipelines.
J. Am. Medical Informatics Assoc., 2018
Proceedings of the AMIA 2018, 2018
2017
Detecting clinically relevant new information in clinical notes across specialties and settings.
BMC Medical Informatics Decis. Mak., 2017
Proceedings of the 6th Joint Conference on Lexical and Computational Semantics, 2017
Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017
Detecting Signals of Interactions Between Warfarin and Dietary Supplements in Electronic Health Records.
Proceedings of the MEDINFO 2017: Precision Healthcare through Informatics, 2017
Proceedings of the Summit on Clinical Research Informatics, 2017
Using ensembles of NLP engines without a common type system to improve abbreviation disambiguation.
Proceedings of the Summit on Clinical Research Informatics, 2017
Proceedings of the Summit on Clinical Research Informatics, 2017
Proceedings of the AMIA 2017, 2017
2016
A comparative observational study of inpatient clinical note-entry and reading/retrieval styles adopted by physicians.
Int. J. Medical Informatics, 2016
Bioinform., 2016
Identifying Family History and Substance Use Associations for Adult Epilepsy from the Electronic Health Record.
Proceedings of the Summit on Clinical Research Informatics, 2016
NLP-PIER: A Scalable Natural Language Processing, Indexing, and Searching Architecture for Clinical Notes.
Proceedings of the Summit on Clinical Research Informatics, 2016
Proceedings of the 2016 IEEE-EMBS International Conference on Biomedical and Health Informatics, 2016
Investigating Longitudinal Tobacco Use Information from Social History and Clinical Notes in the Electronic Health Record.
Proceedings of the AMIA 2016, 2016
Does Section Order Affect Physicians' Experiences Reviewing Ambulatory Progress Notes?
Proceedings of the AMIA 2016, 2016
Towards Comprehensive Clinical Abbreviation Disambiguation Using Machine-Labeled Training Data.
Proceedings of the AMIA 2016, 2016
Proceedings of the AMIA 2016, 2016
2015
Using automatic speech recognition to assess spoken responses to cognitive tests of semantic verbal fluency.
Speech Commun., 2015
Ease of adoption of clinical natural language processing software: An evaluation of five systems.
J. Biomed. Informatics, 2015
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015
Proceedings of the MEDINFO 2015: eHealth-enabled Health, 2015
Evaluating Term Coverage of Herbal and Dietary Supplements in Electronic Health Records.
Proceedings of the AMIA 2015, 2015
Proceedings of the AMIA 2015, 2015
2014
J. Biomed. Informatics, 2014
A sense inventory for clinical abbreviations and acronyms created using clinical notes and medical dictionary resources.
J. Am. Medical Informatics Assoc., 2014
Proceedings of the 15th Annual Conference of the International Speech Communication Association, 2014
Using Language Models to Identify Relevant New Information in Inpatient Clinical Note.
Proceedings of the AMIA 2014, 2014
Proceedings of the AMIA 2014, 2014
Proceedings of the AMIA 2014, 2014
Proceedings of the AMIA 2014, 2014
2013
Effects of time constraints on clinician-computer interaction: A study on information synthesis from EHR clinical notes.
J. Biomed. Informatics, 2013
Quantification of speech disfluency as a marker of medication-induced cognitive impairment: An application of computerized speech analysis in neuropharmacology.
Comput. Speech Lang., 2013
Proceedings of the Human Language Technologies: Conference of the North American Chapter of the Association of Computational Linguistics, 2013
Navigating Longitudinal Clinical Notes with an Automated Method for Detecting New Information.
Proceedings of the MEDINFO 2013, 2013
Proceedings of the MEDINFO 2013, 2013
Proceedings of the 51st Annual Meeting of the Association for Computational Linguistics, 2013
2012
Using PharmGKB to train text mining approaches for identifying potential gene targets for pharmacogenomic studies.
J. Biomed. Informatics, 2012
Proceedings of the 13th Annual Conference of the International Speech Communication Association, 2012
Proceedings of the ACM International Health Informatics Symposium, 2012
Measuring the similarity and relatedness of concepts in the medical domain: IHI 2012 tutorial overview.
Proceedings of the ACM International Health Informatics Symposium, 2012
Semantic relatedness study using second order co-occurrence vectors computed from biomedical corpora, UMLS and WordNet.
Proceedings of the ACM International Health Informatics Symposium, 2012
Proceedings of the AMIA 2012, 2012
Automated Disambiguation of Acronyms and Abbreviations in Clinical Texts: Window and Training Size Considerations.
Proceedings of the AMIA 2012, 2012
Proceedings of the AMIA 2012, 2012
Proceedings of the AMIA 2012, 2012
Evaluating Semantic Relatedness and Similarity Measures with Standardized MedDRA Queries.
Proceedings of the AMIA 2012, 2012
2011
J. Biomed. Informatics, 2011
Proceedings of the 12th Annual Conference of the International Speech Communication Association, 2011
Proceedings of the 12th Annual Conference of the International Speech Communication Association, 2011
Proceedings of the Fifteenth Conference on Computational Natural Language Learning, 2011
2010
Evaluation of family history information within clinical documents and adequacy of HL7 clinical statement and clinical genomics family history models for its representation: a case report.
J. Am. Medical Informatics Assoc., 2010
Proceedings of the Second Louhi Workshop on Text and Data Mining of Health Documents, 2010
2009
UMLS-Interface and UMLS-Similarity : Open Source Software for Measuring Paths and Semantic Similarity.
Proceedings of the AMIA 2009, 2009
2008
Technical Brief: Automatic Classification of Foot Examination Findings Using Clinical Notes and Machine Learning.
J. Am. Medical Informatics Assoc., 2008
Proceedings of the Text, Speech and Dialogue, 11th International Conference, 2008
Proceedings of the AMIA 2008, 2008
2007
J. Biomed. Informatics, 2007
Proceedings of the Biological, translational, and clinical language processing, 2007
2006
Research Paper: Automating the Assignment of Diagnosis Codes to Patient Encounters Using Example-based and Machine Learning Techniques.
J. Am. Medical Informatics Assoc., 2006
Int. J. Medical Informatics, 2006
Proceedings of the AMIA 2006, 2006
A Comparative Study of Supervised Learning as Applied to Acronym Expansion in Clinical Reports.
Proceedings of the AMIA 2006, 2006
Proceedings of the Proceedings, 2006
Proceedings of the Proceedings, 2006
2005
Prospective recruitment of patients with congestive heart failure using an ad-hoc binary classifier.
J. Biomed. Informatics, 2005
J. Biomed. Informatics, 2005
Proceedings of the AMIA 2005, 2005
Proceedings of the AMIA 2005, 2005
Proceedings of the AMIA 2005, 2005
Proceedings of the AMIA 2005, 2005
Proceedings of the ACL 2005, 2005
Proceedings of the Knowledge Collection from Volunteer Contributors, 2005
2004
A Corpus Driven Approach Applying the "Frame Semantic" Method for Modeling Functional Status Terminology.
Proceedings of the MEDINFO 2004, 2004
Proceedings of the MEDINFO 2004, 2004
Creating a Test Corpus of Clinical Notes Manually Tagged for Part-of-Speech Information.
Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and its Applications, 2004
2003
Identification of Patients with Congestive Heart Failure using a Binary Classifier: A Case Study.
Proceedings of the Workshop on Natural Language Processing in Biomedicine, 2003
Proceedings of the Workshop on Natural Language Processing in Biomedicine, 2003
A Data-Driven Approach for Extracting "the Most Specific Term" for Ontology Development.
Proceedings of the AMIA 2003, 2003
2002
Proceedings of the AMIA 2002, 2002
Semi-Supervised Maximum Entropy Based Approach to Acronym and Abbreviation Normalization in Medical Texts.
Proceedings of the 40th Annual Meeting of the Association for Computational Linguistics, 2002
2001
Proceedings of the Language Technologies 2001: The Second Meeting of the North American Chapter of the Association for Computational Linguistics, 2001
2000
Improving language model perplexity and recognition accuracy for medical dictations via within-domain interpolation with literal and semi-literal corpora.
Proceedings of the Sixth International Conference on Spoken Language Processing, 2000
1999
Proceedings of the 27th Annual Meeting of the Association for Computational Linguistics, 1999