Sergei Maslov

Orcid: 0000-0002-3701-492X

According to our database1, Sergei Maslov authored at least 25 papers between 2006 and 2024.

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Bibliography

2024
Semi-quantitative group testing for efficient and accurate qPCR screening of pathogens with a wide range of loads.
BMC Bioinform., December, 2024

2023
FUN-PROSE: A deep learning approach to predict condition-specific gene expression in fungi.
PLoS Comput. Biol., November, 2023

Predicting metabolomic profiles from microbial composition through neural ordinary differential equations.
Nat. Mac. Intell., March, 2023

Transformer Neural Networks for Protein Family and Interaction Prediction Tasks.
J. Comput. Biol., 2023

Semi-Quantitative Group Testing for Efficient and Accurate qPCR Screening of Pathogens with a Wide Range of Loads.
CoRR, 2023

2022
Fine-scale diversity of microbial communities due to satellite niches in boom and bust environments.
PLoS Comput. Biol., December, 2022

A cross-study analysis of drug response prediction in cancer cell lines.
Briefings Bioinform., 2022

2020
Modeling microbial cross-feeding at intermediate scale portrays community dynamics and species coexistence.
PLoS Comput. Biol., 2020

Transforming the Language of Life: Transformer Neural Networks for Protein Prediction Tasks.
Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020

2019
Evidence for a multi-level trophic organization of the human gut microbiome.
PLoS Comput. Biol., 2019

Multistability and regime shifts in microbial communities explained by competition for essential nutrients.
CoRR, 2019

2018
Predicting tumor cell line response to drug pairs with deep learning.
BMC Bioinform., 2018

2017
Microbial community structure predicted by the stable marriage problem.
CoRR, 2017

2016
DREISS: Using State-Space Models to Infer the Dynamics of Gene Expression Driven by External and Internal Regulatory Networks.
PLoS Comput. Biol., 2016

2015
Diversity Waves in Collapse-Driven Population Dynamics.
PLoS Comput. Biol., 2015

2013
Universal distribution of component frequencies in biological and technological systems.
Proc. Natl. Acad. Sci. USA, 2013

Evolutionary Capacitance and Control of Protein Stability in Protein-Protein Interaction Networks.
PLoS Comput. Biol., 2013

Comparative network analysis of gene co-expression networks reveals the conserved and species-specific functions of cell-wall related genes between Arabidopsis and Poplar.
Proceedings of the ACM Conference on Bioinformatics, 2013

2011
A Toolbox Model of Evolution of Metabolic Pathways on Networks of Arbitrary Topology.
PLoS Comput. Biol., 2011

2008
Detection of the dominant direction of information flow and feedback links in densely interconnected regulatory networks.
BMC Bioinform., 2008

Topological and Dynamical Properties of Protein Interaction Networks.
Proceedings of the Protein-protein Interactions and Networks: Identification, 2008

2007
UV-Induced Mutagenesis in <i>Escherichia coli</i> SOS Response: A Quantitative Model.
PLoS Comput. Biol., 2007

Finding scientific gems with Google's PageRank algorithm.
J. Informetrics, 2007

2006
Ranking Scientific Publications Using a Simple Model of Network Traffic
CoRR, 2006

Automatic pathway building in biological association networks.
BMC Bioinform., 2006


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