Sebastian Funk

According to our database, Sebastian Funk authored at least 18 papers between 2010 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Best practices for estimating and reporting epidemiological delay distributions of infectious diseases.

Kelly Charniga, Sang Woo Park, Andrei R. Akhmetzhanov, Anne Cori, Jonathan Dushoff, Sebastian Funk, Katelyn M. Gostic, Natalie M. Linton, Adrian Lison, Christopher E. Overton, Juliet R. C. Pulliam, Thomas Ward, Simon Cauchemez, Sam Abbott

PLoS Comput. Biol., 2024

Live Product Line Engineering Using Density-Based Clustering of CAD Models.

Sebastian Funk, Christoph Legat, Axel Busboom

Proceedings of the Advances and Trends in Artificial Intelligence. Theory and Applications, 2024

2023

Why are different estimates of the effective reproductive number so different? A case study on COVID-19 in Germany.

Elisabeth K. Brockhaus, Daniel Wolffram, Tanja Stadler, Michael Osthege, Tanmay Mitra, Jonas M. Littek, Ekaterina A. Krymova, Anna J. Klesen, Jana S. Huisman, Stefan Heyder, Laura Marie Helleckes, Matthias an der Heiden, Sebastian Funk, Sam Abbott, Johannes Bracher

PLoS Comput. Biol., November, 2023

Collaborative nowcasting of COVID-19 hospitalization incidences in Germany.

Daniel Wolffram, Sam Abbott, Matthias an der Heiden, Sebastian Funk, Felix Günther, Davide Hailer, Stefan Heyder, Thomas Hotz, Jan van de Kassteele, Helmut Küchenhoff, Sören Müller-Hansen, Diellë Syliqi, Alexander Ullrich, Maximilian Weigert, Melanie Schienle, Johannes Bracher

PLoS Comput. Biol., 2023

Evaluating the use of social contact data to produce age-specific short-term forecasts of SARS-CoV-2 incidence in England.

James D. Munday, Sam Abbott, Sophie Meakin, Sebastian Funk

PLoS Comput. Biol., 2023

Scoring epidemiological forecasts on transformed scales.

Nikos I. Bosse, Sam Abbott, Anne Cori, Edwin van Leeuwen, Johannes Bracher, Sebastian Funk

PLoS Comput. Biol., 2023

2022

Comparing human and model-based forecasts of COVID-19 in Germany and Poland.

Nikos I. Bosse, Sam Abbott, Johannes Bracher, Habakuk Hain, Billy J. Quilty, Mark Jit, Edwin van Leeuwen, Anne Cori, Sebastian Funk

PLoS Comput. Biol., September, 2022

Measuring the unknown: An estimator and simulation study for assessing case reporting during epidemics.

Christopher I. Jarvis, Amy Gimma, Flavio Finger, Tim P. Morris, Jennifer A. Thompson, Olivier Le Polain de Waroux, W. John Edmunds, Sebastian Funk, Thibaut Jombart

PLoS Comput. Biol., 2022

2021

Correction: Practical considerations for measuring the effective reproductive number, Rt.

Katelyn M. Gostic, Lauren McGough, Edward B. Baskerville, Sam Abbott, Keya Joshi, Christine Tedijanto, Rebecca Kahn, Rene Niehus, James A. Hay, Pablo M. De Salazar, Joel Hellewell, Sophie Meakin, James D. Munday, Nikos I. Bosse, Katharine Sherratt, Robin N. Thompson, Laura F. White, Jana S. Huisman, Jérémie Scire, Sebastian Bonhoeffer, Tanja Stadler, Jacco Wallinga, Sebastian Funk, Marc Lipsitch, Sarah Cobey

PLoS Comput. Biol., 2021

covidregionaldata: Subnational data for COVID-19 epidemiology.

Joseph Palmer, Katharine Sherratt, Richard Martin-Nielson, Jonnie Bevan, Hamish Gibbs, LSHTM CMMID COVID-19 Working Group, Sebastian Funk, Sam Abbott

J. Open Source Softw., 2021

<i>o2geosocial</i>: Reconstructing who-infected-whom from routinely collected surveillance data.

Alexis Robert, Sebastian Funk, Adam J. Kucharski

F1000Research, 2021

2020

Practical considerations for measuring the effective reproductive number, Rt.

Katelyn M. Gostic, Lauren McGough, Edward B. Baskerville, Sam Abbott, Keya Joshi, Christine Tedijanto, Rebecca Kahn, Rene Niehus, James A. Hay, Pablo M. De Salazar, Joel Hellewell, Sophie Meakin, James D. Munday, Nikos I. Bosse, Katharine Sherratt, Robin N. Thompson, Laura F. White, Jana S. Huisman, Jérémie Scire, Sebastian Bonhoeffer, Tanja Stadler, Jacco Wallinga, Sebastian Funk, Marc Lipsitch, Sarah Cobey

PLoS Comput. Biol., 2020

2019

Assessing the performance of real-time epidemic forecasts: A case study of Ebola in the Western Area region of Sierra Leone, 2014-15.

Sebastian Funk, Anton Camacho, Adam J. Kucharski, Rachel Lowe, Rosalind M. Eggo, W. John Edmunds

PLoS Comput. Biol., 2019

Fine-scale family structure shapes influenza transmission risk in households: Insights from primary schools in Matsumoto city, 2014/15.

Akira Endo, Mitsuo Uchida, Adam J. Kucharski, Sebastian Funk

PLoS Comput. Biol., 2019

2017

A mechanistic spatio-temporal framework for modelling individual-to-individual transmission - With an application to the 2014-2015 West Africa Ebola outbreak.

Max S. Y. Lau, Gavin J. Gibson, Hola Adrakey, Amanda McClelland, Steven Riley, Jon Zelner, George Streftaris, Sebastian Funk, C. Jessica E. Metcalf, Benjamin D. Dalziel, Bryan T. Grenfell

PLoS Comput. Biol., 2017

2013

Identifying Transmission Cycles at the Human-Animal Interface: The Role of Animal Reservoirs in Maintaining Gambiense Human African Trypanosomiasis.

Sebastian Funk, Hiroshi Nishiura, Hans Heesterbeek, W. John Edmunds, Francesco Checchi

PLoS Comput. Biol., 2013

Word usage mirrors community structure in the online social network Twitter.

John Bryden, Sebastian Funk, Vincent A. A. Jansen

EPJ Data Sci., 2013

2010

Stability in Flux - Group Dynamics in Adaptive Networks.

Nicholas Geard, John Bryden, Sebastian Funk, Vincent A. A. Jansen, Seth Bullock

Proceedings of the Twelfth International Conference on the Synthesis and Simulation of Living Systems, 2010