Sarah A. Teichmann

According to our database, Sarah A. Teichmann authored at least 25 papers between 1998 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Celcomen: spatial causal disentanglement for single-cell and tissue perturbation modeling.

Stathis Megas, Daniel G. Chen, Krzysztof Polanski, Moshe Eliasof, Carola-Bibiane Schönlieb, Sarah A. Teichmann

CoRR, 2024

2022

Expression Atlas update: gene and protein expression in multiple species.

Pablo A. Moreno, Silvie Fexova, Nancy George, Jonathan R. Manning, Zhichao Miao, Suhaib Mohammed, Alfonso Muñoz-Pomer Fuentes, Anja Füllgrabe, Yalan Bi, Natassja Bush, Haider Iqbal, Upendra Kumbham, Andrey Solovyev, Lingyun Zhao, Ananth Prakash, David García-Seisdedos, Deepti Jaiswal Kundu, Shengbo Wang, Mathias Walzer, Laura Clarke, David Osumi-Sutherland, Marcela Karey Tello-Ruiz, Sunita Kumari, Doreen Ware, Jana Eliasova, Mark J. Arends, Martijn C. Nawijn, Kerstin B. Meyer, Tony Burdett, John C. Marioni, Sarah A. Teichmann, Juan Antonio Vizcaíno, Alvis Brazma, Irene Papatheodorou

Nucleic Acids Res., 2022

Modelling Technical and Biological Effects in scRNA-seq data with Scalable GPLVMs.

Vidhi Lalchand, Aditya Ravuri, Emma Dann, Natsuhiko Kumasaka, Dinithi Sumanaweera, Rik G. H. Lindeboom, Shaista Madad, Sarah A. Teichmann, Neil D. Lawrence

Proceedings of the Machine Learning in Computational Biology, 21-22 November 2022, Online, 2022

2020

Expression Atlas update: from tissues to single cells.

Irene Papatheodorou, Pablo A. Moreno, Jonathan R. Manning, Alfonso Muñoz-Pomer Fuentes, Nancy George, Silvie Fexova, Nuno A. Fonseca, Anja Füllgrabe, Matthew Green, Ni Huang, Laura Huerta, Haider Iqbal, Monica Jianu, Suhaib Mohammed, Lingyun Zhao, Andrew F. Jarnuczak, Simon Jupp, John C. Marioni, Kerstin B. Meyer, Robert Petryszak, Cesar Augusto Prada Medina, Carlos Talavera-López, Sarah A. Teichmann, Juan Antonio Vizcaíno, Alvis Brazma

Nucleic Acids Res., 2020

BBKNN: fast batch alignment of single cell transcriptomes.

Krzysztof Polanski, Matthew D. Young, Zhichao Miao, Kerstin B. Meyer, Sarah A. Teichmann, Jong-Eun Park

Bioinform., 2020

2019

The human body at cellular resolution: the NIH Human Biomolecular Atlas Program.

Michael P. Snyder, Shin Lin, Amanda Posgai, Mark Atkinson, Aviv Regev, Jennifer Rood, Orit Rozenblatt-Rosen, Leslie Gaffney, Anna Hupalowska, Rahul Satija, Nils Gehlenborg, Jay Shendure, Julia Laskin, Pehr Harbury, Nicholas A. Nystrom, Jonathan C. Silverstein, Ziv Bar-Joseph, Kun Zhang, Katy Börner, Yiing Lin, Richard Conroy, Dena Procaccini, Ananda L. Roy, Ajay Pillai, Marishka Brown, Zorina S. Galis, Long Cai, Cole Trapnell, Dana Jackson, Garry P. Nolan, William James Greenleaf, Sylvia K. Plevritis, Sara Ahadi, Stephanie A. Nevins, Hayan Lee, Christian Martijn Schuerch, Sarah Black, Vishal Gautham Venkataraaman, Ed Esplin, Aaron Horning, Amir Bahmani, Xin Sun, Sanjay Jain, James S. Hagood, Gloria Pryhuber, Peter V. Kharchenko, Bernd Bodenmiller, Todd Brusko, Michael Clare-Salzler, Harry Nick, Kevin Otto, Clive Wasserfall, Marda Jorgensen, Maigan Brusko, Sergio Maffioletti, Richard M. Caprioli, Jeffrey M. Spraggins, Danielle Gutierrez, Nathan Heath Patterson, Elizabeth K. Neumann, Raymond Harris, Mark P. de Caestecker, Agnes B. Fogo, Raf Van de Plas, Ken Lau, Guo-Cheng Yuan, Qian Zhu, Ruben Dries, Peng Yin, Sinem K. Saka, Jocelyn Y. Kishi, Yu Wang, Isabel Goldaracena, Dong Hye Ye, Kristin E. Burnum-Johnson, Paul D. Piehowski, Charles Ansong, Ying Zhu, Tushar Desai, Jay Mulye, Peter Chou, Monica Nagendran, Sarah A. Teichmann, Benedict Paten, Robert F. Murphy, Jian Ma, Vladimir Yu. Kiselev, Carl Kingsford, Allyson Ricarte, Maria Keays, Sushma Anand Akoju, Matthew Ruffalo, Margaret Vella, Chuck McCallum, Leonard E. Cross, Samuel H. Friedman, Randy W. Heiland, Bruce William Herr II, Paul Macklin, Ellen M. Quardokus, Lisel Record, James P. Sluka, Griffin M. Weber, Philip D. Blood, Alexander Ropelewski, William Shirey, Robin M. Scibek, Paula M. Mabee, W. Christopher Lenhardt, Kimberly Robasky, Stavros Michailidis, John C. Marioni, Andrew Butler, Tim Stuart, Eyal Fisher, Shila Ghazanfar, Gökcen Eraslan, Tommaso Biancalani, Eeshit D. Vaishnav, Pothur Srinivas, Aaron Pawlyk, Salvatore Sechi, Elizabeth L. Wilder, James Anderson

Nat., 2019

Decoding human fetal liver haematopoiesis.

Dorin-Mirel Popescu, Rachel A. Botting, Emily Stephenson, Kile Green, Simone Webb, Laura Jardine, Emily F. Calderbank, Krzysztof Polanski, Issac Goh, Mirjana Efremova, Meghan Acres, Daniel Maunder, Peter Vegh, Yorick Gitton, Jong-Eun Park, Roser Vento-Tormo, Zhichao Miao, David Dixon, Rachel Rowell, David McDonald, James Fletcher, Elizabeth Poyner, Gary Reynolds, Michael Mather, Corina Moldovan, Lira Mamanova, Frankie Greig, Matthew D. Young, Kerstin B. Meyer, Steven Lisgo, Jaume Bacardit, Andrew Fuller, Ben Millar, Barbara Innes, Susan Lindsay, Michael J. T. Stubbington, Monika S. Kowalczyk, Bo Li, Orr Ashenberg, Marcin Tabaka, Danielle Dionne, Timothy L. Tickle, Michal Slyper, Orit Rozenblatt-Rosen, Andrew Filby, Peter Carey, Alexandra-Chloé Villani, Anindita Roy, Aviv Regev, Alain Chédotal, Irene Roberts, Berthold Göttgens, Sam Behjati, Elisa Laurenti, Sarah A. Teichmann, Muzlifah Haniffa

Nat., 2019

2016

Single-cell RNA-seq identifies a PD-1^hi ILC progenitor and defines its development pathway.

Yong Yu, Jason C. H. Tsang, Cui Wang, Simon Clare, Juexuan Wang, Xi Chen, Cordelia Brandt, Leanne Kane, Lia S. Campos, Liming Lu, Gabrielle T. Belz, Andrew N. J. McKenzie, Sarah A. Teichmann, Gordon Dougan, Pentao Liu

Nat., 2016

2010

Assessing Computational Methods of Cis-Regulatory Module Prediction.

Jing Su, Sarah A. Teichmann, Thomas A. Down

PLoS Comput. Biol., 2010

FlyTF: improved annotation and enhanced functionality of the <i>Drosophila</i> transcription factor database.

Ulrike Pfreundt, Daniel P. James, Susan Tweedie, Derek Wilson, Sarah A. Teichmann, Boris Adryan

Nucleic Acids Res., 2010

2009

BloodExpress: a database of gene expression in mouse haematopoiesis.

Diego Miranda-Saavedra, Subhajyoti De, Matthew W. B. Trotter, Sarah A. Teichmann, Berthold Göttgens

Nucleic Acids Res., 2009

Protein domain organisation: adding order.

Sarah K. Kummerfeld, Sarah A. Teichmann

BMC Bioinform., 2009

2008

DBD--taxonomically broad transcription factor predictions: new content and functionality.

Derek Wilson, Varodom Charoensawan, Sarah K. Kummerfeld, Sarah A. Teichmann

Nucleic Acids Res., 2008

2007

The (In)dependence of Alternative Splicing and Gene Duplication.

David Talavera, Christine Vogel, Modesto Orozco, Sarah A. Teichmann, Xavier de la Cruz

PLoS Comput. Biol., 2007

2006

3D Complex: A Structural Classification of Protein Complexes.

Emmanuel D. Levy, José B. Pereira-Leal, Cyrus Chothia, Sarah A. Teichmann

PLoS Comput. Biol., 2006

DBD: a transcription factor prediction database.

Sarah K. Kummerfeld, Sarah A. Teichmann

Nucleic Acids Res., 2006

FlyTF: a systematic review of site-specific transcription factors in the fruit fly <i>Drosophila melanogaster</i>.

Boris Adryan, Sarah A. Teichmann

Bioinform., 2006

2005

Statistical analysis of domains in interacting protein pairs.

Tom M. W. Nye, Carlo Berzuini, Walter R. Gilks, M. Madan Babu, Sarah A. Teichmann

Bioinform., 2005

The properties of protein family space depend on experimental design.

Victor Kunin, Sarah A. Teichmann, Martijn A. Huynen, Christos A. Ouzounis

Bioinform., 2005

2002

Principles of protein-protein interactions.

Sarah A. Teichmann

Proceedings of the European Conference on Computational Biology (ECCB 2002), 2002

2001

An insight into domain combinations.

Gordana Apic, Julian Gough, Sarah A. Teichmann

Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, 2001

2000

Fast assignment of protein structures to sequences using the Intermediate Sequence Library PDB-ISL.

Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong-Chan Park

Bioinform., 2000

PDB_ISL: an intermediate sequence library for protein structure assignment.

Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong-Chan Park

Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, 2000

1999

Genome sequences and protein structures.

Sarah A. Teichmann, Jong-Chan Park, Cyrus Chothia

Proceedings of the Third Annual International Conference on Research in Computational Molecular Biology, 1999

1998

DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteins.

Jong-Chan Park, Sarah A. Teichmann

Bioinform., 1998