Sara Mostafavi

According to our database, Sara Mostafavi authored at least 16 papers between 2006 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Gemini: memory-efficient integration of hundreds of gene networks with high-order pooling.

Addie Woicik, Mingxin Zhang, Hanwen Xu, Sara Mostafavi, Sheng Wang

Bioinform., 2023

2022

Cross-Linked Unified Embedding for cross-modality representation learning.

Xinming Tu, Zhi-Jie Cao, Chenrui Xia, Sara Mostafavi, Ge Gao

Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022

2020

Deconvolving the contributions of cell-type heterogeneity on cortical gene expression.

Ellis Patrick, Mariko Taga, Ayla Ergün, Bernard Ng, William Casazza, Maria Cimpean, Christina Yung, Julie A. Schneider, David A. Bennett, Chris Gaiteri, Philip L. De Jager, Elizabeth M. Bradshaw, Sara Mostafavi

PLoS Comput. Biol., 2020

Deep learning decodes the principles of differential gene expression.

Shinya Tasaki, Chris Gaiteri, Sara Mostafavi, Yanling Wang

Nat. Mach. Intell., 2020

CoMeBack: DNA methylation array data analysis for co-methylated regions.

Evan Gatev, Nicole Gladish, Sara Mostafavi, Michael S. Kobor

Bioinform., 2020

2016

Modeling trajectories of mental health: challenges and opportunities.

Lauren Erdman, Ekansh Sharma, Eva Unternaehrer, Shantala A. Hari Dass, Kieran J. O'Donnell, Sara Mostafavi, Rachel Edgar, Michael S. Kobor, Hélène Gaudreau, Michael J. Meaney, Anna Goldenberg

CoRR, 2016

2015

Sharing and Specificity of Co-expression Networks across 35 Human Tissues.

Emma Pierson, Daphne Koller, Alexis J. Battle, Sara Mostafavi

PLoS Comput. Biol., 2015

2011

Computational Prediction of Gene Function From High-throughput Data Sources.

Sara Mostafavi

PhD thesis, 2011

Unsupervised detection of genes of influence in lung cancer using biological networks.

Anna Goldenberg, Sara Mostafavi, Gerald T. Quon, Paul C. Boutros, Quaid Morris

Bioinform., 2011

2010

The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function.

David Warde-Farley, Sylva L. Donaldson, Ovi Comes, Khalid Zuberi, Rashad Badrawi, Pauline Chao, Max Franz, Chris Grouios, Farzana Kazi, Christian Tannus Lopes, Anson Maitland, Sara Mostafavi, Jason Montojo, Quentin Shao, George Wright, Gary D. Bader, Quaid Morris

Nucleic Acids Res., 2010

A neural network based modeling and validation approach for identifying gene regulatory networks.

Simon Knott, Sara Mostafavi, Parvin Mousavi

Neurocomputing, 2010

Fast integration of heterogeneous data sources for predicting gene function with limited annotation.

Sara Mostafavi, Quaid Morris

Bioinform., 2010

2009

Using the Gene Ontology Hierarchy when Predicting Gene Function.

Sara Mostafavi, Quaid Morris

Proceedings of the UAI 2009, 2009

2006

Predictive modeling of therapy response in multiple sclerosis using gene expression data.

Sara Mostafavi, Sergio Baranzini, Jorge Oksernberg, Parvin Mousavi

Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006

A Neural Network Based Approach for Inference and Verification of Transcriptional Regulatory Interactions.

Simon Knott, Sara Mostafavi, Parvin Mousavi

Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006

A Fast Multivariate Feature-Selection/Classification Approach for Prediction of Therapy Response in Multiple Sclerosis.

Sara Mostafavi, Sergio Baranzini, Jorge Oksenberg, Parvin Mousavi

Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2006