Sandra Gesing

Orcid: 0000-0002-6051-0673

Affiliations:
  • University of Notre Dame, Indiana, USA


According to our database1, Sandra Gesing authored at least 109 papers between 2009 and 2024.

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Bibliography

2024
Unleashing quantum algorithms with Qinterpreter: bridging the gap between theory and practice across leading quantum computing platforms.
PeerJ Comput. Sci., 2024

AI and Science Gateways: A Promising Combination for Accelerating Science and Research Computing.
Proceedings of the Practice and Experience in Advanced Research Computing 2024: Human Powered Computing, 2024

Introduction to the Minitrack on Smart Application Development and Data Streaming: IoT, I4.0, Smart Cities and More.
Proceedings of the 57th Hawaii International Conference on System Sciences, 2024

Introduction to the Minitrack on Software Sustainability: Research on Usability, Maintainability, and Reproducibility Minitrack.
Proceedings of the 57th Hawaii International Conference on System Sciences, 2024

2023
Science Gateways and the Humanities: An Exploratory Study of Their Rare Partnership.
Comput. Sci. Eng., 2023

Hubzero: Community Growth for Four Science Gateways Supporting Open Science.
Comput. Sci. Eng., 2023

VisDict: Improving Communication Via a Visual Dictionary in a Science Gateway.
Comput. Sci. Eng., 2023

Unleashing quantum algorithms with Qinterpreter: bridging the gap between theory and practice across leading quantum computing platforms.
CoRR, 2023

Toward a reference architecture based science gateway framework with embedded e-learning support.
Concurr. Comput. Pract. Exp., 2023

Introduction to the Minitrack on Software Sustainability: Strategies for Long-Lasting and Usable Software.
Proceedings of the 56th Hawaii International Conference on System Sciences, 2023

Introduction to the Minitrack on Smart (City) and Data Streaming Application Development: Challenges and Experiences.
Proceedings of the 56th Hawaii International Conference on System Sciences, 2023

2022
A survey of the state of the practice for research software in the United States.
PeerJ Comput. Sci., 2022

The Science Gateway Community Institute's Consulting Services Program: Lessons for Research Software Engineering Organizations.
CoRR, 2022

Open Science via HUBzero: Exploring Five Science Gateways Supporting and Growing their Open Science Communities.
Proceedings of the 55th Hawaii International Conference on System Sciences, 2022

Introduction to the Minitrack on Software Sustainability: Strategies for Long-Lasting and Usable Research Software.
Proceedings of the 55th Hawaii International Conference on System Sciences, 2022

2021
URSSI Community Survey 2018 Raw Data.
Dataset, September, 2021

Special issue on workflows in support of large-scale science.
Future Gener. Comput. Syst., 2021

Reproducibility Practice in High-Performance Computing: Community Survey Results.
Comput. Sci. Eng., 2021

Toward Long-Term and Archivable Reproducibility.
Comput. Sci. Eng., 2021

Workflows Community Summit: Advancing the State-of-the-art of Scientific Workflows Management Systems Research and Development.
CoRR, 2021

Measuring success for a future vision: Defining impact in science gateways/virtual research environments.
Concurr. Comput. Pract. Exp., 2021

An Evaluation of Cyberinfrastructure Facilitators Skills Training in the Virtual Residency Program.
Proceedings of the PEARC '21: Practice and Experience in Advanced Research Computing, 2021

A Vision for Science Gateways: Bridging the Gap and Broadening the Outreach.
Proceedings of the PEARC '21: Practice and Experience in Advanced Research Computing, 2021

Emerging Frameworks for Advancing Scientific Workflows Research, Development, and Education.
Proceedings of the 2021 IEEE Workshop on Workflows in Support of Large-Scale Science (WORKS), 2021

Addressing Research Software Sustainability via Institutes.
Proceedings of the 1st IEEE/ACM International Workshop on Body of Knowledge for Software Sustainability, 2021

Sustaining Research Software via Research Software Engineers and Professional Associations.
Proceedings of the 1st IEEE/ACM International Workshop on Body of Knowledge for Software Sustainability, 2021

Introduction to the Minitrack on Smart (City) Application Development: Challenges and Experiences.
Proceedings of the 54th Hawaii International Conference on System Sciences, 2021

Introduction to the Minitrack on Software Survivability: Strategies for Long-Lasting and Usable Research Software.
Proceedings of the 54th Hawaii International Conference on System Sciences, 2021

2020
The ICTBioMed NCIP Hub: Cancer research in a science gateway consortium.
Future Gener. Comput. Syst., 2020

International Science Gateways 2017 Special issue.
Future Gener. Comput. Syst., 2020

The challenges of theory-software translation.
F1000Research, 2020

SGCI Incubator and its Role in Workforce Development: Lessons Learned from Training, Consultancy, and Building a Community of Community-Builders for Science Gateways.
Proceedings of the PEARC '20: Practice and Experience in Advanced Research Computing, 2020

Cyberinfrastructure Facilitation Skills Training via the Virtual Residency Program.
Proceedings of the PEARC '20: Practice and Experience in Advanced Research Computing, 2020

2019

REMEDI central - expanding and sustaining a medical device community.
Future Gener. Comput. Syst., 2019

Science gateways: Sustainability via on-campus teams.
Future Gener. Comput. Syst., 2019

The Science Gateways Community Institute: Collaborations and efforts on international scale.
Future Gener. Comput. Syst., 2019

The global impact of science gateways, virtual research environments and virtual laboratories.
Future Gener. Comput. Syst., 2019

Community Organizations: Changing the Culture in Which Research Software Is Developed and Sustained.
Comput. Sci. Eng., 2019

Theory-Software Translation: Research Challenges and Future Directions.
CoRR, 2019

Sustaining Research Software: an SC18 Panel.
CoRR, 2019

Cultivating the Cyberinfrastructure Workforce via an Intermediate/Advanced Virtual Residency Workshop.
Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), 2019

HUBzero®: Novel Concepts Applied to Established Computing Infrastructures to Address Communities' Needs.
Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), 2019

HUBzero's Variations of Sustainability: From Simulation/Modeling Tools to Communities.
Proceedings of the 11th International Workshop on Science Gateways, 2019

Introduction to the Minitrack on Smart (City) Application Development: Challenges and Experiences.
Proceedings of the 52nd Hawaii International Conference on System Sciences, 2019

HUBzero© Goes OneSciencePlace: The Next Community-Driven Steps for Providing Software-as-a-Service.
Proceedings of the 15th International Conference on eScience, 2019

2018

Gathering requirements for advancing simulations in HPC infrastructures via science gateways.
Future Gener. Comput. Syst., 2018

Conceptualization of a US Research Software Sustainability Institute (URSSI).
Comput. Sci. Eng., 2018

Progress Update on the Development and Implementation of the Advanced Cyberinfrastructure Research & Education Facilitators Virtual Residency Program.
Proceedings of the Practice and Experience on Advanced Research Computing, 2018

REMEDI - Tactics of Expanding a Science Gateway Community.
Proceedings of the 10th International Workshop on Science Gateways, 2018

Towards a Science Gateway Reference Architecture.
Proceedings of the 10th International Workshop on Science Gateways, 2018

Introduction to the Minitrack on Turning Smart: Challenges and Experiences in Smart Application Development.
Proceedings of the 51st Hawaii International Conference on System Sciences, 2018

Science Gateways in HPC: Usability Meets Efficiency and Effectiveness.
Proceedings of the Modeling and Simulation in HPC and Cloud Systems., 2018

2017
Boosting analyses in the life sciences via clusters, grids and clouds.
Future Gener. Comput. Syst., 2017

Scientific workflows: Past, present and future.
Future Gener. Comput. Syst., 2017

Report on the Fourth Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE4).
CoRR, 2017

The Science Gateways Community Institute: Going Beyond Borders.
Proceedings of the 9th International Workshop on Science Gateways, 2017

Science Gateways: The Long Road to the Birth of an Institute.
Proceedings of the 50th Hawaii International Conference on System Sciences, 2017

Introduction to Science Gateways and Portals Minitrack.
Proceedings of the 50th Hawaii International Conference on System Sciences, 2017

Science Gateways Incubator: Software Sustainability Meets Community Needs.
Proceedings of the 13th IEEE International Conference on e-Science, 2017

2016
Multi-level meta-workflows: new concept for regularly occurring tasks in quantum chemistry.
J. Cheminformatics, 2016

Science Gateway Workshops 2015 Special Issue Conference Publications.
J. Grid Comput., 2016

Using Science Gateways for Bridging the Differences between Research Infrastructures.
J. Grid Comput., 2016

Report on the Third Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE3).
CoRR, 2016

From the desktop to the grid: scalable bioinformatics via workflow conversion.
BMC Bioinform., 2016

A Model for Information and Action Flows Connecting Science Gateways to Distributed Computing Infrastructures.
Proceedings of the 8th International Workshop on Science Gateways, 2016

Measuring Usability in Decision Tools Supporting Collaborations for Environmental Disaster Response.
Proceedings of the 49th Hawaii International Conference on System Sciences, 2016

2015
Introduction to the Special Issue on Cloud for Health.
Scalable Comput. Pract. Exp., 2015

Developing science gateways for drug discovery in a grid environment.
PeerJ Prepr., 2015

VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases.
Nucleic Acids Res., 2015

Genomics and Biological Big Data: Facing Current and Future Challenges around Data and Software Sharing and Reproducibility.
CoRR, 2015

Science gateway workshops 2013 special issue conference publications.
Concurr. Comput. Pract. Exp., 2015

Quantum chemical meta-workflows in MoSGrid.
Concurr. Comput. Pract. Exp., 2015

Science gateway workshops 2014 special issue conference publications.
Concurr. Comput. Pract. Exp., 2015

Overview of XSEDE-PRACE collaborative projects in 2014.
Proceedings of the 2015 XSEDE Conference: Scientific Advancements Enabled by Enhanced Cyberinfrastructure, St. Louis, MO, USA, July 26, 2015

Enhancing the Usability and Utilization of Accelerated Architectures via Docker.
Proceedings of the 8th IEEE/ACM International Conference on Utility and Cloud Computing, 2015

Science gateways - leveraging modeling and simulations in HPC infrastructures via increased usability.
Proceedings of the 2015 International Conference on High Performance Computing & Simulation, 2015

Enhanced Usability of Managing Workflows in an Industrial Data Gateway.
Proceedings of the 11th IEEE International Conference on e-Science, 2015

Scaling Up Bioinformatics Workflows with Dynamic Job Expansion: A Case Study Using Galaxy and Makeflow.
Proceedings of the 11th IEEE International Conference on e-Science, 2015

Managing Complexity in Distributed Data Life Cycles Enhancing Scientific Discovery.
Proceedings of the 11th IEEE International Conference on e-Science, 2015

Balancing Thread-Level and Task-Level Parallelism for Data-Intensive Workloads on Clusters and Clouds.
Proceedings of the 2015 IEEE International Conference on Cluster Computing, 2015

2014
Latest advances in distributed, parallel, and graphic processing unit accelerated approaches to computational biology.
Concurr. Comput. Pract. Exp., 2014

Standards-based metadata management for molecular simulations.
Concurr. Comput. Pract. Exp., 2014

SAMPO: an agent-based mosquito point model in OpenCL.
Proceedings of the Agent-Directed Simulation Symposium, 2014

Workflows in a dashboard: a new generation of usability.
Proceedings of the 9th Workshop on Workflows in Support of Large-Scale Science, 2014

Device-Driven Metadata Management Solutions for Scientific Big Data Use Cases.
Proceedings of the 22nd Euromicro International Conference on Parallel, 2014

Meta-Metaworkflows for Combining Quantum Chemistry and Molecular Dynamics in the MoSGrid Science Gateway.
Proceedings of the 6th International Workshop on Science Gateways, 2014

Gateways to high-perfomance and distributed computing resources for global health challenges.
Proceedings of the 2014 IEEE Canada International Humanitarian Technology Conference, 2014

Federated clouds for biomedical research: Integrating OpenStack for ICTBioMed.
Proceedings of the 3rd IEEE International Conference on Cloud Networking, 2014

Expanding Tasks of Logical Workflows Into Independent Workflows for Improved Scalability.
Proceedings of the 14th IEEE/ACM International Symposium on Cluster, 2014

Towards Generic Metadata Management in Distributed Science Gateway Infrastructures.
Proceedings of the 14th IEEE/ACM International Symposium on Cluster, 2014

Agriculture Data for All - Integrated Tools for Agriculture Data Integration, Analytics, and Sharing.
Proceedings of the 2014 IEEE International Congress on Big Data, Anchorage, AK, USA, June 27, 2014

Molecular Simulation Grid (MosGrid): A Science Gateway Tailored to the Molecular Simulation Community.
Proceedings of the Science Gateways for Distributed Computing Infrastructures, 2014

2013
The MoSGrid - e-science gateway: molecular simulations in a distributed computing environment.
J. Cheminformatics, 2013

The demand for consistent web-based workflow editors.
Proceedings of WORKS 2013: 8th Workshop On Workflows in Support of Large-Scale Science, 2013

User-Friendly Workflows in Quantum Chemistry.
Proceedings of the 5th International Workshop on Science Gateways, 2013

User-friendly metaworkflows in quantum chemistry.
Proceedings of the 2013 IEEE International Conference on Cluster Computing, 2013

2012
MoSGrid: efficient data management and a standardized data exchange format for molecular simulations in a grid environment.
J. Cheminformatics, 2012

A Single Sign-On Infrastructure for Science Gateways on a Use Case for Structural Bioinformatics.
J. Grid Comput., 2012

Workflow-enhanced conformational analysis of guanidine zinc complexes via a science gateway.
Proceedings of the HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences, 2012

Workshop Series IWSG-Life.
Proceedings of the HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences, 2012

2011
MoSGrid - a molecular simulation grid as a new tool in computational chemistry, biology and material science.
J. Cheminformatics, 2011

Molecular simulation grid.
J. Cheminformatics, 2011

Special Issue: Portals for life sciences - Providing intuitive access to bioinformatic tools.
Concurr. Comput. Pract. Exp., 2011


2010
Grid-Workflows in Molecular Science.
Proceedings of the Software Engineering 2010, 2010

TOPP goes Rapid The OpenMS Proteomics Pipeline in a Grid-Enabled Web Portal.
Proceedings of the 10th IEEE/ACM International Conference on Cluster, 2010

2009
Portals for Life Sciences - a Brief Introduction.
Proceedings of the International Workshop on Portals for Life Sciences, 2009


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