Sam Abbott

Orcid: 0000-0001-8057-8037

According to our database1, Sam Abbott authored at least 13 papers between 2019 and 2024.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

2019
2020
2021
2022
2023
2024
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Legend:

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In proceedings 
Article 
PhD thesis 
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Links

Online presence:

On csauthors.net:

Bibliography

2024
Generative Bayesian modeling to nowcast the effective reproduction number from line list data with missing symptom onset dates.
PLoS Comput. Biol., 2024

EpiFusion: Joint inference of the effective reproduction number by integrating phylodynamic and epidemiological modelling with particle filtering.
PLoS Comput. Biol., 2024

Best practices for estimating and reporting epidemiological delay distributions of infectious diseases.
PLoS Comput. Biol., 2024

2023
Why are different estimates of the effective reproductive number so different? A case study on COVID-19 in Germany.
PLoS Comput. Biol., November, 2023

Collaborative nowcasting of COVID-19 hospitalization incidences in Germany.
PLoS Comput. Biol., 2023

Nowcasting the 2022 mpox outbreak in England.
PLoS Comput. Biol., 2023

Evaluating the use of social contact data to produce age-specific short-term forecasts of SARS-CoV-2 incidence in England.
PLoS Comput. Biol., 2023

Scoring epidemiological forecasts on transformed scales.
PLoS Comput. Biol., 2023

2022
Comparing human and model-based forecasts of COVID-19 in Germany and Poland.
PLoS Comput. Biol., September, 2022

2021
Correction: Practical considerations for measuring the effective reproductive number, Rt.
PLoS Comput. Biol., 2021

covidregionaldata: Subnational data for COVID-19 epidemiology.
J. Open Source Softw., 2021

2020
Practical considerations for measuring the effective reproductive number, Rt.
PLoS Comput. Biol., 2020

2019
getTBinR: an R package for accessing and summarising the World Health Organisation Tuberculosis data.
J. Open Source Softw., 2019


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