Saikat Chakrabarti

According to our database, Saikat Chakrabarti authored at least 13 papers between 2004 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

Connecting signaling and metabolic pathways in EGF receptor-mediated oncogenesis of glioblastoma.

Arup K. Bag, Sapan Mandloi, Saulius Jarmalavicius, Susmita Mondal, Krishna Kumar, Chhabinath Mandal, Peter Walden, Saikat Chakrabarti, Chitra Mandal

PLoS Comput. Biol., 2019

2015

A survey on prediction of specificity-determining sites in proteins.

Abhijit Chakraborty, Saikat Chakrabarti

Briefings Bioinform., 2015

2012

SPEER-SERVER: a web server for prediction of protein specificity determining sites.

Abhijit Chakraborty, Sapan Mandloi, Christopher J. Lanczycki, Anna R. Panchenko, Saikat Chakrabarti

Nucleic Acids Res., 2012

DBETH: A Database of Bacterial Exotoxins for Human.

Abhijit Chakraborty, Sudeshna Ghosh, Garisha Chowdhary, Ujjwal Maulik, Saikat Chakrabarti

Nucleic Acids Res., 2012

2009

Ensemble approach to predict specificity determinants: benchmarking and validation.

Saikat Chakrabarti, Anna R. Panchenko

BMC Bioinform., 2009

Identification of structurally conserved residues of proteins in absence of structural homologs using neural network ensemble.

Ganesan Pugalenthi, E. Ke Tang, Ponnuthurai N. Suganthan, Saikat Chakrabarti

Bioinform., 2009

2008

MegaMotifBase: a database of structural motifs in protein families and superfamilies.

Ganesan Pugalenthi, Ponnuthurai N. Suganthan, Ramanathan Sowdhamini, Saikat Chakrabarti

Nucleic Acids Res., 2008

2007

SMotif: a server for structural motifs in proteins.

Ganesan Pugalenthi, Ponnuthurai N. Suganthan, Ramanathan Sowdhamini, Saikat Chakrabarti

Bioinform., 2007

2006

Cascade PSI-BLAST web server: a remote homology search tool for relating protein domains.

Rana Bhadra, Sankaran Sandhya, K. R. Abhinandan, Saikat Chakrabarti, Ramanathan Sowdhamini, Narayanaswamy Srinivasan

Nucleic Acids Res., 2006

SSToSS - Sequence-Structural Templates of Single-Member Superfamilies.

Saikat Chakrabarti, Gowri Manohari, Ganesan Pugalenthi, Ramanathan Sowdhamini

Silico Biol., 2006

State of the art: refinement of multiple sequence alignments.

Saikat Chakrabarti, Christopher J. Lanczycki, Anna R. Panchenko, Teresa M. Przytycka, Paul A. Thiessen, Stephen H. Bryant

BMC Bioinform., 2006

2005

SCANMOT: searching for similar sequences using a simultaneous scan of multiple sequence motifs.

Saikat Chakrabarti, Prem A. Anand, Nitin Bhardwaj, Ganesan Pugalenthi, Ramanathan Sowdhamini

Nucleic Acids Res., 2005

2004

Improvement of alignment accuracy utilizing sequentially conserved motifs.

Saikat Chakrabarti, Nitin Bhardwaj, Prem A. Anand, Ramanathan Sowdhamini

BMC Bioinform., 2004