Ruy M. Ribeiro

According to our database, Ruy M. Ribeiro authored at least 12 papers between 2007 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

How robust are estimates of key parameters in standard viral dynamic models?

Carolin Zitzmann, Ruian Ke, Ruy M. Ribeiro, Alan S. Perelson

PLoS Comput. Biol., 2024

Modeling dynamics of acute HIV infection incorporating density-dependent cell death and multiplicity of infection.

Ellie Mainou, Ruy M. Ribeiro, Jessica M. Conway

PLoS Comput. Biol., 2024

2023

Forecasting Large Realized Covariance Matrices: The Benefits of Factor Models and Shrinkage.

Rafael Alves, Diego S. de Brito, Marcelo C. Medeiros, Ruy M. Ribeiro

CoRR, 2023

2021

Zika virus dynamics: Effects of inoculum dose, the innate immune response and viral interference.

Katharine Best, Dan H. Barouch, Jérémie Guedj, Ruy M. Ribeiro, Alan S. Perelson

PLoS Comput. Biol., 2021

2016

Modeling the Effects of Morphine on Simian Immunodeficiency Virus Dynamics.

Naveen K. Vaidya, Ruy M. Ribeiro, Alan S. Perelson, Anil Kumar

PLoS Comput. Biol., 2016

2014

Inferring Viral Dynamics in Chronically HCV Infected Patients from the Spatial Distribution of Infected Hepatocytes.

Frederik Graw, Ashwin Balagopal, Abraham J. Kandathil, Stuart C. Ray, David L. Thomas, Ruy M. Ribeiro, Alan S. Perelson

PLoS Comput. Biol., 2014

Antibody Responses during Hepatitis B Viral Infection.

Stanca M. Ciupe, Ruy M. Ribeiro, Alan S. Perelson

PLoS Comput. Biol., 2014

2013

Parameter estimation and identifiability of a HIV-1 model.

Ana Portêlo, João Miranda Lemos, Susana Vinga, Ruy M. Ribeiro, J. P. Cruz, Emília Valadas

Proceedings of the 21st Mediterranean Conference on Control and Automation, 2013

2011

Effect of 1918 PB1-F2 Expression on Influenza A Virus Infection Kinetics.

Amber M. Smith, Frederick R. Adler, Julie L. McAuley, Ryan N. Gutenkunst, Ruy M. Ribeiro, Jonathan A. McCullers, Alan S. Perelson

PLoS Comput. Biol., 2011

2010

Current Estimates for HIV-1 Production Imply Rapid Viral Clearance in Lymphoid Tissues.

Rob J. De Boer, Ruy M. Ribeiro, Alan S. Perelson

PLoS Comput. Biol., 2010

Response network analysis of differential gene expression in human epithelial lung cells during avian influenza infections.

Ken Tatebe, Ahmet Zeytun, Ruy M. Ribeiro, Robert Hoffmann, Kevin S. Harrod, Christian V. Forst

BMC Bioinform., 2010

2007

Towards Real Time Epidemiology: Data Assimilation, Modeling and Anomaly Detection of Health Surveillance Data Streams.

Luís M. A. Bettencourt, Ruy M. Ribeiro, Gerardo Chowell, Timothy Lant, Carlos Castillo-Chavez

Proceedings of the Intelligence and Security Informatics: Biosurveillance, 2007