Russell B. Davidson

According to our database, Russell B. Davidson authored at least 6 papers between 2018 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Predicted structural proteome of <i>Sphagnum divinum</i> and proteome-scale annotation.

Russell B. Davidson, Mark Coletti, Mu Gao, Bryan Piatkowski, Avinash Sreedasyam, Farhan Quadir, David J. Weston, Jeremy Schmutz, Jianlin Cheng, Jeffrey Skolnick, Jerry M. Parks, Ada Sedova

Bioinform., August, 2023

tinyIFD: A High-Throughput Binding Pose Refinement Workflow Through Induced-Fit Ligand Docking.

Darren J. Hsu, Russell B. Davidson, Ada Sedova, Jens Glaser

J. Chem. Inf. Model., June, 2023

2022

OpenMDlr: parallel, open-source tools for general protein structure modeling and refinement from pairwise distances.

Russell B. Davidson, Jess Woods, T. Chad Effler, Mathialakan Thavappiragasam, Julie C. Mitchell, Jerry M. Parks, Ada Sedova

Bioinform., 2022

Proteome-scale Deployment of Protein Structure Prediction Workflows on the Summit Supercomputer.

Mu Gao, Mark Coletti, Russell B. Davidson, Ryan Prout, Subil Abraham, Benjamín Hernández, Ada Sedova

Proceedings of the IEEE International Parallel and Distributed Processing Symposium, 2022

2021

Modeling protein structures from predicted contacts with modern molecular dynamics potentials: accuracy, sensitivity, and refinement.

Russell B. Davidson, Mathialakan Thavappiragasam, T. Chad Effler, Jess Woods, Dwayne A. Elias, Jerry M. Parks, Ada Sedova

Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021

2018

Allostery in the dengue virus NS3 helicase: Insights into the NTPase cycle from molecular simulations.

Russell B. Davidson, Josie Hendrix, Brian J. Geiss, Martin McCullagh

PLoS Comput. Biol., 2018