Rosemary Braun

According to our database, Rosemary Braun authored at least 10 papers between 2005 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Temperature-driven coordination of circadian transcriptional regulation.

Bingxian Xu, Dae-Sung Hwangbo, Sumit Saurabh, Clark Rosensweig, Ravi Allada, William L. Kath, Rosemary Braun

PLoS Comput. Biol., 2024

2023

fasano.franceschini.test: An Implementation of a Multivariate KS Test in R.

Connor Puritz, Elan Ness-Cohn, Rosemary Braun

R J., September, 2023

2021

TimeCycle: topology inspired method for the detection of cycling transcripts in circadian time-series data.

Elan Ness-Cohn, Rosemary Braun

Bioinform., 2021

2019

Mutation, drift and selection in single-driver hematologic malignancy: Example of secondary myelodysplastic syndrome following treatment of inherited neutropenia.

Tomasz Wojdyla, Hrishikesh Mehta, Taly Glaubach, Roberto Bertolusso, Marta Iwanaszko, Rosemary Braun, Seth J. Corey, Marek Kimmel

PLoS Comput. Biol., 2019

GeneSurrounder: network-based identification of disease genes in expression data.

Sahil D. Shah, Rosemary Braun

BMC Bioinform., 2019

2018

Time-lagged Ordered Lasso for network inference.

Phan Nguyen, Rosemary Braun

BMC Bioinform., 2018

Semi-supervised network inference using simulated gene expression dynamics.

Phan Nguyen, Rosemary Braun

Bioinform., 2018

2011

Partition decoupling for multi-gene analysis of gene expression profiling data.

Rosemary Braun, Gregory Leibon, Scott D. Pauls, Daniel N. Rockmore

BMC Bioinform., 2011

2008

Identifying differential correlation in gene/pathway combinations.

Rosemary Braun, Leslie Cope, Giovanni Parmigiani

BMC Bioinform., 2008

2005

Scalable molecular dynamics with NAMD.

James C. Phillips, Rosemary Braun, Wei Wang, James C. Gumbart, Emad Tajkhorshid, Elizabeth Villa, Christophe Chipot, Robert D. Skeel, Laxmikant V. Kalé, Klaus Schulten

J. Comput. Chem., 2005