Rose Oughtred

According to our database, Rose Oughtred authored at least 19 papers between 2003 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII.

Andrew Chatr-aryamontri, Lynette Hirschman, Karen E. Ross, Rose Oughtred, Martin Krallinger, Kara Dolinski, Mike Tyers, Tonia Korves, Cecilia N. Arighi

Database J. Biol. Databases Curation, 2022

2019

The BioGRID interaction database: 2019 update.

Rose Oughtred, Chris Stark, Bobby-Joe Breitkreutz, Jennifer M. Rust, Lorrie Boucher, Christie S. Chang, Nadine Kolas, Lara O'Donnell, Genie Leung, Rochelle McAdam, Frederick Zhang, Sonam Dolma, Andrew Willems, Jasmin Coulombe-Huntington, Andrew Chatr-aryamontri, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2019

2017

The BioGRID interaction database: 2017 update.

Andrew Chatr-aryamontri, Rose Oughtred, Lorrie Boucher, Jennifer M. Rust, Christie S. Chang, Nadine Kolas, Lara O'Donnell, Sara Oster, Chandra L. Theesfeld, Adnane Sellam, Chris Stark, Bobby-Joe Breitkreutz, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2017

The BioC-BioGRID corpus: full text articles annotated for curation of protein-protein and genetic interactions.

Rezarta Islamaj Dogan, Sun Kim, Andrew Chatr-aryamontri, Christie S. Chang, Rose Oughtred, Jennifer M. Rust, W. John Wilbur, Donald C. Comeau, Kara Dolinski, Mike Tyers

Database J. Biol. Databases Curation, 2017

2016

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.

Sun Kim, Rezarta Islamaj Dogan, Andrew Chatr-aryamontri, Christie S. Chang, Rose Oughtred, Jennifer M. Rust, Riza Batista-Navarro, Jacob Carter, Sophia Ananiadou, Sérgio Matos, André Santos, David Campos, José Luís Oliveira, Onkar Singh, Jitendra Jonnagaddala, Hong-Jie Dai, Emily Chia-Yu Su, Yung-Chun Chang, Yu-Chen Su, Chun-Han Chu, Chien Chin Chen, Wen-Lian Hsu, Yifan Peng, Cecilia N. Arighi, Cathy H. Wu, K. Vijay-Shanker, Ferhat Aydin, Zehra Melce Hüsünbeyi, Arzucan Özgür, Soo-Yong Shin, Dongseop Kwon, Kara Dolinski, Mike Tyers, W. John Wilbur, Donald C. Comeau

Database J. Biol. Databases Curation, 2016

2015

The BioGRID interaction database: 2015 update.

Andrew Chatr-aryamontri, Bobby-Joe Breitkreutz, Rose Oughtred, Lorrie Boucher, Sven Heinicke, Daici Chen, Chris Stark, Ashton Breitkreutz, Nadine Kolas, Lara O'Donnell, Teresa Reguly, Julie Nixon, Lindsay Ramage, Andrew G. Winter, Adnane Sellam, Christie S. Chang, Jodi E. Hirschman, Chandra L. Theesfeld, Jennifer M. Rust, Michael S. Livstone, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2015

2014

RLIMS-P: an online text-mining tool for literature-based extraction of protein phosphorylation information.

Manabu Torii, Gang Li, Zhiwen Li, Rose Oughtred, Francesca Diella, Irem Çelen, Cecilia N. Arighi, Hongzhan Huang, K. Vijay-Shanker, Cathy H. Wu

Database J. Biol. Databases Curation, 2014

2013

The BioGRID interaction database: 2013 update.

Andrew Chatr-aryamontri, Bobby-Joe Breitkreutz, Sven Heinicke, Lorrie Boucher, Andrew G. Winter, Chris Stark, Julie Nixon, Lindsay Ramage, Nadine Kolas, Lara O'Donnell, Teresa Reguly, Ashton Breitkreutz, Adnane Sellam, Daici Chen, Christie S. Chang, Jennifer M. Rust, Michael S. Livstone, Rose Oughtred, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2013

The PhosphoGRID <i>Saccharomyces cerevisiae</i> protein phosphorylation site database: version 2.0 update.

Ivan Sadowski, Bobby-Joe Breitkreutz, Chris Stark, Ting-Cheng Su, Matthew Dahabieh, Sheetal Raithatha, Wendy Bernhard, Rose Oughtred, Kara Dolinski, Kris Barreto, Mike Tyers

Database J. Biol. Databases Curation, 2013

2011

The BioGRID Interaction Database: 2011 update.

Chris Stark, Bobby-Joe Breitkreutz, Andrew Chatr-aryamontri, Lorrie Boucher, Rose Oughtred, Michael S. Livstone, Julie Nixon, Kimberly Van Auken, Xiaodong Wang, Xiaoqi Shi, Teresa Reguly, Jennifer M. Rust, Andrew G. Winter, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2011

2010

<i>Saccharomyces</i> Genome Database provides mutant phenotype data.

Stacia R. Engel, Rama Balakrishnan, Gail Binkley, Karen R. Christie, Maria C. Costanzo, Selina S. Dwight, Dianna G. Fisk, Jodi E. Hirschman, Benjamin C. Hitz, Eurie L. Hong, Cynthia J. Krieger, Michael S. Livstone, Stuart R. Miyasato, Robert S. Nash, Rose Oughtred, Julie Park, Marek S. Skrzypek, Shuai Weng, Edith D. Wong, Kara Dolinski, David Botstein, J. Michael Cherry

Nucleic Acids Res., 2010

2008

Gene Ontology annotations at SGD: new data sources and annotation methods.

Eurie L. Hong, Rama Balakrishnan, Qing Dong, Karen R. Christie, Julie Park, Gail Binkley, Maria C. Costanzo, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Jodi E. Hirschman, Benjamin C. Hitz, Cynthia J. Krieger, Michael S. Livstone, Stuart R. Miyasato, Robert S. Nash, Rose Oughtred, Marek S. Skrzypek, Shuai Weng, Edith D. Wong, Kathy K. Zhu, Kara Dolinski, David Botstein, J. Michael Cherry

Nucleic Acids Res., 2008

The BioGRID Interaction Database: 2008 update.

Bobby-Joe Breitkreutz, Chris Stark, Teresa Reguly, Lorrie Boucher, Ashton Breitkreutz, Michael S. Livstone, Rose Oughtred, Daniel H. Lackner, Jürg Bähler, Valerie Wood, Kara Dolinski, Mike Tyers

Nucleic Acids Res., 2008

2007

Expanded protein information at SGD: new pages and proteome browser.

Robert S. Nash, Shuai Weng, Benjamin C. Hitz, Rama Balakrishnan, Karen R. Christie, Maria C. Costanzo, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Jodi E. Hirschman, Eurie L. Hong, Michael S. Livstone, Rose Oughtred, Julie Park, Marek S. Skrzypek, Chandra L. Theesfeld, Gail Binkley, Qing Dong, Christopher Lane, Stuart R. Miyasato, Anand Sethuraman, Mark Schroeder, Kara Dolinski, David Botstein, J. Michael Cherry

Nucleic Acids Res., 2007

2006

Genome Snapshot: a new resource at the <i>Saccharomyces</i> Genome Database (SGD) presenting an overview of the <i>Saccharomyces cerevisiae</i> genome.

Jodi E. Hirschman, Rama Balakrishnan, Karen R. Christie, Maria C. Costanzo, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Eurie L. Hong, Michael S. Livstone, Robert S. Nash, Julie Park, Rose Oughtred, Marek S. Skrzypek, Barry Starr, Chandra L. Theesfeld, Jennifer M. Williams, Rey Andrada, Gail Binkley, Qing Dong, Christopher Lane, Stuart R. Miyasato, Anand Sethuraman, Mark Schroeder, Mayank K. Thanawala, Shuai Weng, Kara Dolinski, David Botstein, J. Michael Cherry

Nucleic Acids Res., 2006

2005

Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the <i>Saccharomyces</i> Genome Database (SGD).

Rama Balakrishnan, Karen R. Christie, Maria C. Costanzo, Kara Dolinski, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Jodi E. Hirschman, Eurie L. Hong, Robert S. Nash, Rose Oughtred, Marek S. Skrzypek, Chandra L. Theesfeld, Gail Binkley, Qing Dong, Christopher Lane, Anand Sethuraman, Shuai Weng, David Botstein, J. Michael Cherry

Nucleic Acids Res., 2005

2004

Ligand Depot: a data warehouse for ligands bound to macromolecules.

Zukang Feng, Li Chen, Himabindu Maddula, Ozgur Akcan, Rose Oughtred, Helen M. Berman, John D. Westbrook

Bioinform., 2004

TargetDB: a target registration database for structural genomics projects.

Li Chen, Rose Oughtred, Helen M. Berman, John D. Westbrook

Bioinform., 2004

2003

Partioning a Graph of Sequences, Structures and Abstracts for Information Retrieval.

Aynur A. Dayanik, Craig G. Nevill-Manning, Rose Oughtred

Proceedings of The Twelfth Text REtrieval Conference, 2003