Rónán Daly

According to our database, Rónán Daly authored at least 16 papers between 2005 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

ViMMS 2.0: A framework to develop, test and optimise fragmentation strategies in LC-MS metabolomics.

Joe Wandy, Vinny Davies, Ross McBride, Stefan Weidt, Simon Rogers, Rónán Daly

J. Open Source Softw., 2022

2021

Ranking microbial metabolomic and genomic links in the NPLinker framework using complementary scoring functions.

Grímur Hjörleifsson Eldjárn, Andrew Ramsay, Justin J. J. van der Hooft, Katherine R. Duncan, Sylvia Soldatou, Juho Rousu, Rónán Daly, Joe Wandy, Simon Rogers

PLoS Comput. Biol., 2021

R package for statistical inference in dynamical systems using kernel based gradient matching: KGode.

Mu Niu, Joe Wandy, Rónán Daly, Simon Rogers, Dirk Husmeier

Comput. Stat., 2021

GraphOmics: an interactive platform to explore and integrate multi-omics data.

Joe Wandy, Rónán Daly

BMC Bioinform., 2021

2018

Ms2lda.org: web-based topic modelling for substructure discovery in mass spectrometry.

Joe Wandy, Yunfeng Zhu, Justin J. J. van der Hooft, Rónán Daly, Michael P. Barrett, Simon Rogers

Bioinform., 2018

ShinyKGode: an interactive application for ODE parameter inference using gradient matching.

Joe Wandy, Mu Niu, Diana Giurghita, Rónán Daly, Simon Rogers, Dirk Husmeier

Bioinform., 2018

MetaboCraft: building a Minecraft plugin for metabolomics.

Anargyros Megalios, Rónán Daly, Karl E. V. Burgess

Bioinform., 2018

2017

PiMP my metabolome: an integrated, web-based tool for LC-MS metabolomics data.

Yoann Gloaguen, Fraser R. Morton, Rónán Daly, Ross Gurden, Simon Rogers, Joe Wandy, David Wilson, Michael P. Barrett, Karl E. V. Burgess

Bioinform., 2017

2015

Incorporating peak grouping information for alignment of multiple liquid chromatography-mass spectrometry datasets.

Joe Wandy, Rónán Daly, Rainer Breitling, Simon Rogers

Bioinform., 2015

2014

MetAssign: probabilistic annotation of metabolites from LC-MS data using a Bayesian clustering approach.

Rónán Daly, Simon Rogers, Joe Wandy, Andris Jankevics, Karl E. V. Burgess, Rainer Breitling

Bioinform., 2014

2012

Cell Proliferation Tracking Using Graphene Sensor Arrays.

Rónán Daly, Shishir Kumar, Gyongyi Lukacs, Kangho Lee, Anne Weidlich, Martin Hegner, Georg S. Duesberg

J. Sensors, 2012

2011

Learning Bayesian networks: approaches and issues.

Rónán Daly, Qiang Shen, J. Stuart Aitken

Knowl. Eng. Rev., 2011

2009

Learning Bayesian Network Equivalence Classes with Ant Colony Optimization.

Rónán Daly, Qiang Shen

J. Artif. Intell. Res., 2009

Using Higher-Order Dynamic Bayesian Networks to Model Periodic Data from the Circadian Clock of Arabidopsis Thaliana.

Rónán Daly, Kieron D. Edwards, John S. O'Neill, J. Stuart Aitken, Andrew J. Millar, Mark A. Girolami

Proceedings of the Pattern Recognition in Bioinformatics, 2009

2006

Speeding up the learning of equivalence classes of bayesian network structures.

Rónán Daly, Qiang Shen, J. Stuart Aitken

Proceedings of the Artificial Intelligence and Soft Computing, 2006

2005

Inferring gene regulatory networks from classified microarray data: Initial results.

J. Stuart Aitken, Thanyaluk Jirapech-Umpai, Rónán Daly

BMC Bioinform., 2005