Ron Kikinis

Orcid: 0000-0001-7227-7058

Affiliations:
  • Harvard Medical School, Cambridge, MA, USA
  • University of Bremen, Germany (former)
  • Fraunhofer MEVIS, Bermen, Germany (former)


According to our database1, Ron Kikinis authored at least 269 papers between 1989 and 2024.

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Bibliography

2024
Evaluation of mediastinal lymph node segmentation of heterogeneous CT data with full and weak supervision.
Comput. Medical Imaging Graph., January, 2024

LNQ 2023 challenge: Benchmark of weakly-supervised techniques for mediastinal lymph node quantification.
CoRR, 2024

Towards Automatic Abdominal MRI Organ Segmentation: Leveraging Synthesized Data Generated From CT Labels.
CoRR, 2024

SAT-Morph: Unsupervised Deformable Medical Image Registration Using Vision Foundation Models with Anatomically Aware Text Prompt.
Proceedings of the Foundation Models for General Medical AI, 2024

Revisiting Surgical Instrument Segmentation Without Human Intervention: A Graph Partitioning View.
Proceedings of the 1st International Workshop on Multimedia Computing for Health and Medicine, 2024

Extracting 3D Prostate Geometry from 2D Optically-Tracked Transrectal Ultrasound Images.
Proceedings of the IEEE Canadian Conference on Electrical and Computer Engineering, 2024

2023
A Review of Low-Cost Ultrasound Compatible Phantoms.
IEEE Trans. Biomed. Eng., December, 2023

The NCI Imaging Data Commons as a platform for reproducible research in computational pathology.
Comput. Methods Programs Biomed., December, 2023

SlicerCBM: automatic framework for biomechanical analysis of the brain.
Int. J. Comput. Assist. Radiol. Surg., October, 2023

Comparison of physics-based deformable registration methods for image-guided neurosurgery.
Frontiers Digit. Health, March, 2023

Reconstructing the somatotopic organization of the corticospinal tract remains a challenge for modern tractography methods.
CoRR, 2023

Enrichment of the NLST and NSCLC-Radiomics computed tomography collections with AI-derived annotations.
CoRR, 2023

Fine-Grained Hand Bone Segmentation via Adaptive Multi-dimensional Convolutional Network and Anatomy-Constraint Loss.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

A Registration- and Uncertainty-Based Framework for White Matter Tract Segmentation with Only One Annotated Subject.
Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

DEEPRGVP: A novel microstructure-informed supervised contrastive learning framework for automated identification of the retinogeniculate pathway using dMRI tractography.
Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

2022
Surgical data science - from concepts toward clinical translation.
Medical Image Anal., 2022

Quantitative Analysis of Liver Disease Using MRI-Based Radiomic Features of the Liver and Spleen.
J. Imaging, 2022

Automatic framework for patient-specific modelling of tumour resection-induced brain shift.
Comput. Biol. Medicine, 2022

2021
Design of an Ultrasound-Navigated Prostate Cancer Biopsy System for Nationwide Implementation in Senegal.
J. Imaging, 2021

MRI-based radiomic feature analysis of end-stage liver disease for severity stratification.
Int. J. Comput. Assist. Radiol. Surg., 2021

Development of an open-source system for prostate biopsy training in Senegal.
Proceedings of the Medical Imaging 2021: Image-Guided Procedures, 2021

Ultrasound-guided needle placement system optimized for translation to Mauritania.
Proceedings of the Medical Imaging 2021: Image-Guided Procedures, 2021

2020
Open Source Platform for Transperineal In-Bore MRI-Guided Targeted Prostate Biopsy.
IEEE Trans. Biomed. Eng., 2020

Creation of a novel trigeminal tractography atlas for automated trigeminal nerve identification.
NeuroImage, 2020

Put That Needle There: Customized Flexible On-Body Thin-Film Displays for Medical Navigation.
ACM Trans. Comput. Heal., 2020

Adaptive Physics-Based Non-Rigid Registration for Immersive Image-Guided Neuronavigation Systems.
Frontiers Digit. Health, 2020

Surgical Data Science - from Concepts to Clinical Translation.
CoRR, 2020

Enhanced registration of ultrasound volumes by segmentation of resection cavity in neurosurgical procedures.
Int. J. Comput. Assist. Radiol. Surg., 2020

2019
Automatic Needle Segmentation and Localization in MRI With 3-D Convolutional Neural Networks: Application to MRI-Targeted Prostate Biopsy.
IEEE Trans. Medical Imaging, 2019

Auditory Display for Telerobotic Transnasal Surgery Using a Continuum Robot.
J. Medical Robotics Res., 2019

Biomechanical modeling and computer simulation of the brain during neurosurgery.
CoRR, 2019

Uncertainty-aware asynchronous scattered motion interpolation using Gaussian process regression.
Comput. Medical Imaging Graph., 2019

Multimodal image registration for liver radioembolization planning and patient assessment.
Int. J. Comput. Assist. Radiol. Surg., 2019

Segmentation-based registration of ultrasound volumes for glioma resection in image-guided neurosurgery.
Int. J. Comput. Assist. Radiol. Surg., 2019

Neural-network-based automatic segmentation of cerebral ultrasound images for improving image-guided neurosurgery.
Proceedings of the Medical Imaging 2019: Image-Guided Procedures, 2019

Registration of Ultrasound Volumes Based on Euclidean Distance Transform.
Proceedings of the Large-Scale Annotation of Biomedical Data and Expert Label Synthesis and Hardware Aware Learning for Medical Imaging and Computer Assisted Intervention, 2019

2018
Repeatability of Multiparametric Prostate MRI Radiomics Features.
CoRR, 2018

Surgical Data Science: A Consensus Perspective.
CoRR, 2018

Auditory display as feedback for a novel eye-tracking system for sterile operating room interaction.
Int. J. Comput. Assist. Radiol. Surg., 2018

Auditory display for fluorescence-guided open brain tumor surgery.
Int. J. Comput. Assist. Radiol. Surg., 2018

Train the Trainers: Medical Technology for the Sustainable Development of Africa.
Proceedings of the 2018 IEEE Global Humanitarian Technology Conference, 2018

2017
The Open Anatomy Browser: A Collaborative Web-Based Viewer for Interoperable Anatomy Atlases.
Frontiers Neuroinformatics, 2017

Large scale digital prostate pathology image analysis combining feature extraction and deep neural network.
CoRR, 2017

Surgical Data Science: Enabling Next-Generation Surgery.
CoRR, 2017

Instrument-mounted displays for reducing cognitive load during surgical navigation.
Int. J. Comput. Assist. Radiol. Surg., 2017

A Survey of auditory display in image-guided interventions.
Int. J. Comput. Assist. Radiol. Surg., 2017

Auditory feedback to support image-guided medical needle placement.
Int. J. Comput. Assist. Radiol. Surg., 2017

Optimized positioning of autonomous surgical lamps.
Proceedings of the Medical Imaging 2017: Image-Guided Procedures, 2017

Standardized communications of quantitative image analysis results using DICOM: Establishing interoperability through outreach and community engagement.
Proceedings of the Summit on Clinical Research Informatics, 2017

2016
Pairwise Latent Semantic Association for Similarity Computation in Medical Imaging.
IEEE Trans. Biomed. Eng., 2016

Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience.
Medical Image Anal., 2016

Dictionary pruning with visual word significance for medical image retrieval.
Neurocomputing, 2016

A generic module interface in MeVisLab using OpenIGTLink for defining iterative communication workflows among robotic devices.
Proceedings of the 15. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie, September 29, 2016

Large Scale Cloud-Based Deformable Registration for Image Guided Therapy.
Proceedings of the First IEEE International Conference on Connected Health: Applications, 2016

2015
Multimodal Neuroimaging Feature Learning for Multiclass Diagnosis of Alzheimer's Disease.
IEEE Trans. Biomed. Eng., 2015

Patient-specific biomechanical model as whole-body CT image registration tool.
Medical Image Anal., 2015

Morphometry-Based Longitudinal Neurodegeneration Simulation with MR Imaging.
CoRR, 2015

Multimodal neuroimaging computing: the workflows, methods, and platforms.
Brain Informatics, 2015

Multimodal neuroimaging computing: a review of the applications in neuropsychiatric disorders.
Brain Informatics, 2015

Longitudinal brain MR retrieval with diffeomorphic demons registration: What happened to those patients with similar changes?
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

Subject-centered multi-view feature fusion for neuroimaging retrieval and classification.
Proceedings of the 2015 IEEE International Conference on Image Processing, 2015

Content-Based Retrieval of Brain Diffusion Magnetic Resonance Image.
Proceedings of the Multimodal Retrieval in the Medical Domain, 2015

Autonomous Surgical Lamps.
Proceedings of the 14. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie, 2015

Multi-Phase Feature Representation Learning for Neurodegenerative Disease Diagnosis.
Proceedings of the Artificial Life and Computational Intelligence, 2015

2014
Application of Tolerance Limits to the Characterization of Image Registration Performance.
IEEE Trans. Medical Imaging, 2014

Multi-Channel neurodegenerative pattern analysis and its application in Alzheimer's disease characterization.
Comput. Medical Imaging Graph., 2014

MRI brain tumor segmentation and necrosis detection using adaptive Sobolev snakes.
Proceedings of the Medical Imaging 2014: Image Processing, 2014

Patient-Specific Meshless Model for Whole-Body Image Registration.
Proceedings of the Biomedical Simulation - 6th International Symposium, 2014

Early diagnosis of Alzheimer's disease with deep learning.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

Co-neighbor multi-view spectral embedding for medical content-based retrieval.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

Propagation graph fusion for multi-modal medical content-based retrieval.
Proceedings of the 13th International Conference on Control Automation Robotics & Vision, 2014

Latent Semantic Association for Medical Image Retrieval.
Proceedings of the 2014 International Conference on Digital Image Computing: Techniques and Applications, 2014

2013
GBM Volumetry using the 3D Slicer Medical Image Computing Platform
CoRR, 2013

On Describing Human White Matter Anatomy: The White Matter Query Language.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Multifold Bayesian Kernelization in Alzheimer's Diagnosis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

High-resolution electroencephalographic forward modeling in traumatic brain injury using the finite element method.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Localized Sparse Code Gradient in Alzheimer's disease staging.
Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

Ein kubusbasierter Ansatz zur Segmentierung von Wirbeln in MRT-Aufnahmen.
Proceedings of the Bildverarbeitung für die Medizin 2013 - Algorithmen - Systeme, 2013

Medical Image Computing for Translational Biomedical Research.
Proceedings of the Bildverarbeitung für die Medizin 2013 - Algorithmen - Systeme, 2013

2012
A 3D interactive multi-object segmentation tool using local robust statistics driven active contours.
Medical Image Anal., 2012

Ontological labels for automated location of anatomical shape differences.
J. Biomed. Informatics, 2012

The National Alliance for Medical Image Computing, a roadmap initiative to build a free and open source software infrastructure for translational research in medical image analysis.
J. Am. Medical Informatics Assoc., 2012

Pituitary Adenoma Volumetry with 3D Slicer
CoRR, 2012

Automatic airway analysis for genome-wide association studies in COPD.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2011
Stochastic tractography study of Inferior Frontal Gyrus anatomical connectivity in schizophrenia.
NeuroImage, 2011

Ontological Labels for Automated Location of Left Ventricular Remodeling.
Proceedings of the 5th IEEE International Conference on Semantic Computing (ICSC 2011), 2011

Segmentation of Nerve Bundles and Ganglia in Spine MRI Using Particle Filters.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

White Matter Bundle Registration and Population Analysis Based on Gaussian Processes.
Proceedings of the Information Processing in Medical Imaging, 2011

3D Slicer as a tool for interactive brain tumor segmentation.
Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011

2010
Non-Rigid Registration for brain MRI: faster and cheaper.
Int. J. Funct. Informatics Pers. Medicine, 2010

User-driven 3D mesh region targeting.
Proceedings of the Medical Imaging 2010: Visualization, 2010

Simultaneous Multi-object Segmentation Using Local Robust Statistics and Contour Interaction.
Proceedings of the Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging, 2010

2009
Computational neuroanatomy: ontology-based representation of neural components and connectivity.
BMC Bioinform., 2009

Lung Extraction, Lobe Segmentation and Hierarchical Region Assessment for Quantitative Analysis on High Resolution Computed Tomography Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

Real-Time Non-rigid Registration of Medical Images on a Cooperative Parallel Architecture.
Proceedings of the 2009 IEEE International Conference on Bioinformatics and Biomedicine, 2009

2008
A prototype symbolic model of canonical functional neuroanatomy of the motor system.
J. Biomed. Informatics, 2008

Evaluation of Brain MRI Alignment with the Robust Hausdorff Distance Measures.
Proceedings of the Advances in Visual Computing, 4th International Symposium, 2008

Monitoring slowly evolving tumors.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

2007
A Hierarchical Algorithm for MR Brain Image Parcellation.
IEEE Trans. Medical Imaging, 2007

Oriented Speckle Reducing Anisotropic Diffusion.
IEEE Trans. Image Process., 2007

Using the logarithm of odds to define a vector space on probabilistic atlases.
Medical Image Anal., 2007

A CT Database for Research, Development and Education: Concept and Potential.
J. Digit. Imaging, 2007

Device Connectivity for Image-Guided Medical Applications.
Proceedings of the Medicine Meets Virtual Reality 15, 2007

Patient Specific Simulation and Navigation of Ventriculoscopic Interventions.
Proceedings of the Medicine Meets Virtual Reality 15, 2007

Application of Open Source Image Guided Therapy Software in MR-guided Therapies.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Active Mean Fields: Solving the Mean Field Approximation in the Level Set Framework.
Proceedings of the Information Processing in Medical Imaging, 2007

Grid-Enabled Software Environment for Enhanced Dynamic Data-Driven Visualization and Navigation During Image-Guided Neurosurgery.
Proceedings of the Computational Science, 2007

2006
A Bayesian model for joint segmentation and registration.
NeuroImage, 2006

Imaging and visual analysis - Toward real-time image guided neurosurgery using distributed and grid computing.
Proceedings of the ACM/IEEE SC2006 Conference on High Performance Networking and Computing, 2006

Logarithm Odds Maps for Shape Representation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

Accurate Airway Wall Estimation Using Phase Congruency.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

The NA-MIC Kit: ITK, VTK, pipelines, grids and 3D slicer as an open platform for the medical image computing community.
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

"Big Science" and Schizophrenia.
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

An evaluation of three approaches to tetrahedral mesh generation for deformable registration of brain MR images.
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

2005
Robust nonrigid registration to capture brain shift from intraoperative MRI.
IEEE Trans. Medical Imaging, 2005

DTI and MTR abnormalities in schizophrenia: Analysis of white matter integrity.
NeuroImage, 2005

Capturing intraoperative deformations: research experience at Brigham and Women's hospital.
Medical Image Anal., 2005

Detection and analysis of statistical differences in anatomical shape.
Medical Image Anal., 2005

A global goodness-of-fit test for receiver operating characteristic curve analysis via the bootstrap method.
J. Biomed. Informatics, 2005

Development and testing of a cross-sectional area measurement tool for evaluating vein size.
Comput. Biol. Medicine, 2005

Brain Shift Computation Using a Fully Nonlinear Biomechanical Model.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

A Unifying Approach to Registration, Segmentation, and Intensity Correction.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

A Segmentation and Reconstruction Technique for 3D Vascular Structures.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

Hybrid Formulation of the Model-Based Non-rigid Registration Problem to Improve Accuracy and Robustness.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

Speckle-Constrained Filtering of Ultrasound Images.
Proceedings of the 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2005), 2005

Shape Based Segmentation of Anatomical Structures in Magnetic Resonance Images.
Proceedings of the Computer Vision for Biomedical Image Applications, 2005

The National Alliance for Medical Imaging Computing (NA-MIC).
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, 2005

2004
Improved watershed transform for medical image segmentation using prior information.
IEEE Trans. Medical Imaging, 2004

White matter hemisphere asymmetries in healthy subjects and in schizophrenia: a diffusion tensor MRI study.
NeuroImage, 2004

An MRI study of spatial probability brain map differences between first-episode schizophrenia and normal controls.
NeuroImage, 2004

A statistically based flow for image segmentation.
Medical Image Anal., 2004

Flexible frameworks for medical multimedia.
Proceedings of the 12th ACM International Conference on Multimedia, 2004

Dense deformation field estimation for brain intraoperative images registration.
Proceedings of the Medical Imaging 2004: Image Processing, 2004

CISUS: an integrated 3D ultrasound system for IGT using a modular tracking API.
Proceedings of the Medical Imaging 2004: Visualization, 2004

A Prospective Multi-institutional Study of the Reproducibility of fMRI: A Preliminary Report from the Biomedical Informatics Research Network.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Coupling Statistical Segmentation and PCA Shape Modeling.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Control System for MR-Guided Cryotherapy - Short-Term Prediction of Therapy Boundary Using Automatic Segmentation and 3D Optical Flow.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Automatic Optimization of Segmentation Algorithms Through Simultaneous Truth and Performance Level Estimation (STAPLE).
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Discriminative MR Image Feature Analysis for Automatic Schizophrenia and Alzheimer's Disease Classification.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Precise Evaluation of Positioning Repeatability of MR-Compatible Manipulator Inside MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

An Anisotropic Material Model for Image Guided Neurosurgery.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

3D Analysis of Radiofrequency-Ablated Tumors in Liver: A Computer-Aided Diagnosis Tool for Early Detection of Local Recurrences.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Anatomical Guided Segmentation with Non-Stationary Tissue Class Distributions in an Expectation-Maximization Framework.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

3D Slicer.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

CAVE-technology for visualizing medical imagery.
Proceedings of the CARS 2004. Computer Assisted Radiology and Surgery. Proceedings of the 18th International Congress and Exhibition, 2004

2003
Tumor detection in the bladder wall with a measurement of abnormal thickness in CT scans.
IEEE Trans. Biomed. Eng., 2003

Spatial normalization of diffusion tensor MRI using multiple channels.
NeuroImage, 2003

An fMRI study of semantic processing in men with schizophrenia.
NeuroImage, 2003

Holographic Video Display of Time-Series Volumetric Medical Data.
Proceedings of the 14th IEEE Visualization Conference, 2003

Augmenting intraoperative MRI with preoperative fMRI and DTI by biomechanical simulation of brain deformation.
Proceedings of the Medical Imaging 2003: Visualization, 2003

Diffusion Tensor and Functional MRI Fusion with Anatomical MRI for Image-Guided Neurosurgery.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003

A Statistically Based Surface Evolution Method for Medical Image Segmentation: Presentation and Validation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003

Freehand Ultrasound Reconstruction Based on ROI Prior Modeling and Normalized Convolution.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003

A Navigation System for Augmenting Laparoscopic Ultrasound.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003

Capturing Brain Deformation.
Proceedings of the Surgery Simulation and Soft Tissue Modeling, International Symposium, 2003

2002
Voxel-Based Morphometric Analysis of Gray Matter in First Episode Schizophrenia.
NeuroImage, 2002

Processing and visualization for diffusion tensor MRI.
Medical Image Anal., 2002

Nonrigid registration of 3D tensor medical data.
Medical Image Anal., 2002

Serial registration of intraoperative MR images of the brain.
Medical Image Anal., 2002

Statistical Validation of Automated Probabilistic Segmentation against Composite Latent Expert Ground Truth in MR Imaging of Brain Tumors.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Level Set Based Integration of Segmentation and Computational Fluid Dynamics for Flow Correction in Phase Contrast Angiography.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Performance Issues in Shape Classification.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Incorporating Non-rigid Registration into Expectation Maximization Algorithm to Segment MR Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Intra-patient Prone to Supine Colon Registration for Synchronized Virtual Colonoscopy.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Discriminative Analysis for Image-Based Studies.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Recognizing Deviations from Normalcy for Brain Tumor Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Regularized Stochastic White Matter Tractography Using Diffusion Tensor MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Multimodale nicht-rigide Registrierung von Ultraschall und MR-Bilddaten unter Verwendung eines biomechanischen Modells.
Proceedings of the Bildverarbeitung für die Medizin 2002: Algorithmen, 2002

Automatic Nonrigid Registration for Tracking Brain Shift During Neurosurgery.
Proceedings of the Bildverarbeitung für die Medizin 2002: Algorithmen, 2002

2001
Registration of 3D Intraoperative MR Images of the Brain Using a Finite Element Biomechanical Model.
IEEE Trans. Medical Imaging, 2001

Detection of point landmarks in multidimensional tensor data.
Signal Process., 2001

CURVES: Curve evolution for vessel segmentation.
Medical Image Anal., 2001

Real-time simulation and visualization of volumetric brain deformation for image-guided neurosurgery.
Proceedings of the Medical Imaging 2001: Visualization, 2001

Medical image segmentation using high-performance computer clusters.
Proceedings of the Medical Imaging 2001: Visualization, 2001

A Binary Entropy Measure to Assess Nonrigid Registration Algorithms.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Fast Linear Elastic Matching Without Landmarks.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

A Novel Nonrigid Registration Algorithm and Applications.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Unsupervised and Adaptive Segmentation of Multispectral 3D Magnetic Resonance Images of Human Brain: A Generic Approach.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Phase-Based User-Steered Image Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Patient-Specific Simulation of Internal Defibrillation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Multiresolution Signal Processing on Meshes for Automatic Pathological Shape Characterization.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Mass Preserving Mappings and Image Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Phase-Driven Finite Element Model for Spatio-temporal Tracking in Cardiac Tagged MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Surface Based Atlas Matching of the Brain Using Deformable Surfaces and Volumetric Finite Elements.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Physics-Based Subdivision Surface Modeling for Medical Imaging and Simulation.
Proceedings of the Medical Imaging and Augmented Reality: First International Workshop, 2001

Deformation Analysis for Shape Based Classification.
Proceedings of the Information Processing in Medical Imaging, 2001

White Paper: challenges and opportunities in computer-assisted interventions.
Proceedings of the CARS 2001. Computer Assisted Radiology and Surgery. Proceedings of the 15th International Congress and Exhibition, 2001

High Performance Computing in Image Guided Therapy: Computer Assisted Three-Dimensional Planning and Real-Time Navigation for Neurosurgical Procedures.
Proceedings of the Bildverarbeitung für die Medizin 2001: Algorithmen, 2001

2000
Tissue Classification Based on 3D Local Intensity Structures for Volume Rendering.
IEEE Trans. Vis. Comput. Graph., 2000

Conformal Surface Parameterization for Texture Mapping.
IEEE Trans. Vis. Comput. Graph., 2000

Nondistorting Flattening Maps and the 3D Visualization of Colon CT Images.
IEEE Trans. Medical Imaging, 2000

Affine adaptive filtering of CT data.
Medical Image Anal., 2000

Adaptive, template moderated, spatially varying statistical classification.
Medical Image Anal., 2000

Guest Editorial.
Medical Image Anal., 2000

Fast re-rendering of volume and surface graphics by depth, color, and opacity buffering.
Medical Image Anal., 2000

Real-Time Biomechanical Simulation of Volumetric Brain Deformation for Image Guided Neurosurgery.
Proceedings of the Proceedings Supercomputing 2000, 2000

Segmentation by Adaptive Geodesic Active Contours.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Intraoperative Segmentation and Nonrigid Registration for Image Guided Therapy.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Distributed Modular Computer-Integrated Surgical Robotic Systems: Architecture for Intelligent Object Distribution.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Nonrigid Registration of 3D Scalar, Vector and Tensor Medical Data.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Simulation of Corticospinal Tract Displacement in Patients with Brain Tumors.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Non-distorting Flattening for Virtual Colonoscopy.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Small Sample Size Learning for Shape Analysis of Anatomical Structures.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Registration of 3D Intraoperative MR Images of the Brain Using a Finite Element Biomechanical Model.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

A 3-D System for Planning and Simulating Minimally-Invasive Distraction Osteogenesis of the Facial Skeleton.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

MR Compatible Surgical Assist Robot: System Integration and Preliminary Feasibility Study.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Distributed Modular Computer-Integrated Surgical Robotic Systems: Implementation Using Modular Software and Networked Systems.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Pre- and Intra-operative Planning and Simulation of Percutaneous Tumor Ablation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2000

Surgical assist robot for the active navigation in the intraoperative MRI: hardware design issues.
Proceedings of the IEEE/RSJ International Conference on Intelligent Robots and Systems, 2000

Codimension - Two Geodesic Active Contours for the Segmentation of Tubular Structures.
Proceedings of the 2000 Conference on Computer Vision and Pattern Recognition (CVPR 2000), 2000

1999
On the Laplace-Beltrami Operator and Brain Surface Flattening.
IEEE Trans. Medical Imaging, 1999

Image Processing for Diffusion Tensor Magnetic Resonance Imaging.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

Fractional Segmentation of White Matter.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

Segmentation of Meningiomas and Low Grade Gliomas in MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

A Volumetric Optical Flow Method for Measurement of Brain Deformation from Intraoperative Magnetic Resonance Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

An Integrated Visualization System for Surgical Planning and Guidance Using Image Fusion and Interventional Imaging.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

3D Image Matching Using a Finite Element Based Elastic Deformation Model.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

MR Compatibility of Mechatronic Devices: Design Criteria.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

Conformal Geometry and Brain Flattening.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

Co-dimension 2 Geodesic Active Contours for MRA Segmentation.
Proceedings of the Information Processing in Medical Imaging, 1999

Statistical Shape Analysis Using Fixed Topology Skeletons: Corpus Callosum Study.
Proceedings of the Information Processing in Medical Imaging, 1999

Adaptive Template Moderated Brain Tumor Segmentation in MRI.
Proceedings of the Bildverarbeitung für die Medizin 1999: Algorithmen, 1999

1998
A High Performance Computing Approach to the Registration of Medical Imaging Data.
Parallel Comput., 1998

Characterization of Neuropathological Shape Deformations.
IEEE Trans. Pattern Anal. Mach. Intell., 1998

Three-dimensional multi-scale line filter for segmentation and visualization of curvilinear structures in medical images.
Medical Image Anal., 1998

Volumetric object modeling for surgical simulation.
Medical Image Anal., 1998

Experimentation with a transcranial magnetic stimulation system for functional brain mapping.
Medical Image Anal., 1998

Real-Time Image Segmentation for Image-Guided Surgery.
Proceedings of the ACM/IEEE Conference on Supercomputing, 1998

Tensor Controlled Local Structure Enhancement of CT Images for Bone Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

Planning and Evaluation of Reorienting Osteotomies of the Proximal Femur in Cases of SCFE Using Virtual Three-Dimensional Models.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

Virtual Endoscopy of Mucin-Producing Pancreas Tumors.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

An Object-Based Volumetric Deformable Atlas for the Improved Localization of Neuroanatomy in MR Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

Segmentation of Bone in Clinical Knee MRI Using Texture-Based Geodesic Active Contours.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

Enhanced Spatial Priors for Segmentation of Magnetic Resonance Imagery.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

Multimodality Deformable Registration of Pre- and Intraoperative Images for MRI-guided Brain Surgery.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

Clinical Experience with a Hich Precision Image-Guided Neurosurgery System.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

AnatomyBrowser: A Framework for Integration of Medical Information.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

Three-Dimensional Reconstruction and Surgical Navigation in Pediatric Epilepsy Surgery.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

1997
Markov Random Field Segmentation of Brain MR Images.
IEEE Trans. Medical Imaging, 1997

Utilizing Segmented MRI Data in Image-Guided Surgery.
Int. J. Pattern Recognit. Artif. Intell., 1997

3D Voronoi Skeletons and Their Usage for the Characterization and Recognition of 3D Organ Shape.
Comput. Vis. Image Underst., 1997

3D Multi-scale line filter for segmentation and visualization of curvilinear structures in medical images.
Proceedings of the CVRMed-MRCAS'97, 1997

Simulating arthroscopic knee surgery using volumetric object representations, real-time volume rendering and haptic feedback.
Proceedings of the CVRMed-MRCAS'97, 1997

Experimentation with a transcranial magnetic simulation system for functional brain mapping.
Proceedings of the CVRMed-MRCAS'97, 1997

Unwrapping phase in 3D MR phase contrast angiograms.
Proceedings of the CVRMed-MRCAS'97, 1997

Design considerations for a computer-vision-enabled ophthalmic augmented reality environment.
Proceedings of the CVRMed-MRCAS'97, 1997

Using Local 3D Structure for Segmentation of Bone from Computer Tomography Images.
Proceedings of the 1997 Conference on Computer Vision and Pattern Recognition (CVPR '97), 1997

1996
A Digital Brain Atlas for Surgical Planning, Model-Driven Segmentation, and Teaching.
IEEE Trans. Vis. Comput. Graph., 1996

Adaptive segmentation of MRI data.
IEEE Trans. Medical Imaging, 1996

An automatic registration method for frameless stereotaxy, image guided surgery, and enhanced reality visualization.
IEEE Trans. Medical Imaging, 1996

Multi-modal volume registration by maximization of mutual information.
Medical Image Anal., 1996

Segmentation of brain tissue from magnetic resonance images.
Medical Image Anal., 1996

Surface Rendering versus Volume Rendering in Medical Imaging.
Proceedings of the 7th IEEE Visualization Conference, 1996

Image Guided Microscopic Surgery System Using Mutual-Information Based Registraion.
Proceedings of the Visualization in Biomedical Computing, 4th International Conference, 1996

1995
Segmentation of Brain Tissue from MR Images.
Proceedings of the Computer Vision, 1995

Evaluating and Validating an Automated Registration System for Enhanced Reality Visualization in Surgery.
Proceedings of the Computer Vision, 1995

Simulation of Endoscopy.
Proceedings of the Computer Vision, 1995

1994
Statistical intensity correction and segmentation of MRI data.
Proceedings of the Visualization in Biomedical Computing 1994, 1994

Structural description and combined 3D display for superior analysis of cerebral vascularity from MRA.
Proceedings of the Visualization in Biomedical Computing 1994, 1994

Image guidance techniques for neurosurgery.
Proceedings of the Visualization in Biomedical Computing 1994, 1994

Visualization in the Neurosurgical OR.
Proceedings of the Visualization in Biomedical Computing 1994, 1994

Shape analysis of brain structures using physical and experimental modes.
Proceedings of the Conference on Computer Vision and Pattern Recognition, 1994

1993
Enhancing Reality in the Operating Room.
Proceedings of the 4th IEEE Visualization Conference, 1993

1992
Nonlinear anisotropic filtering of MRI data.
IEEE Trans. Medical Imaging, 1992

Unsupervised tissue type segmentation of 3D dual-echo MR head data.
Image Vis. Comput., 1992

Interactive visualization and manipulation of 3-D reconstructions for the planning of surgical procedures.
Proceedings of the Visualization in Biomedical Computing '92, 1992

1991
Automating Segmentation of Dual-Echo MR Head Data.
Proceedings of the Information Processing in Medical Imaging, 1991

1990
Extraction of morphometric information from dual echo magnetic resonance brain images.
Proceedings of the Visual Communications and Image Processing '90: Fifth in a Series, 1990

1989
Medical Imaging and Computer Vision: An Integrated Approach for Diagnosis and Planning.
Proceedings of the Mustererkennung 1989, 1989


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