Roman Eisner

According to our database, Roman Eisner authored at least 16 papers between 2004 and 2016.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2016

ClassyFire: automated chemical classification with a comprehensive, computable taxonomy.

Yannick Djoumbou, Roman Eisner, Craig Knox, Leonid L. Chepelev, Janna Hastings, Gareth I. Owen, Eoin Fahy, Christoph Steinbeck, Shankar Subramanian, Evan Bolton, Russell Greiner, David S. Wishart

J. Cheminformatics, 2016

2014

Accurate, fully-automated NMR spectral profiling for metabolomics.

Siamak Ravanbakhsh, Philip Liu, Trent C. Bjorndahl, Rupasri Mandal, Jason R. Grant, Michael Wilson, Roman Eisner, Igor Sinelnikov, Xiaoyu Hu, Claudio Luchinat, Russell Greiner, David S. Wishart

CoRR, 2014

2013

HMDB 3.0 - The Human Metabolome Database in 2013.

David S. Wishart, Timothy Jewison, Anchi Guo, Michael Wilson, Craig Knox, Yifeng Liu, Yannick Djoumbou, Rupasri Mandal, Farid Aziat, Edison Dong, Souhaila Bouatra, Igor Sinelnikov, David Arndt, Jianguo Xia, Philip Liu, Faizath Yallou, Trent C. Bjorndahl, Rolando Perez-Pineiro, Roman Eisner, Felicity Allen, Vanessa Neveu, Russell Greiner, Augustin Scalbert

Nucleic Acids Res., 2013

Phenol-Explorer 3.0: a major update of the Phenol-Explorer database to incorporate data on the effects of food processing on polyphenol content.

Joseph A. Rothwell, Jara Perez-Jimenez, Vanessa Neveu, Alexander Medina-Remón, Nouha M'Hiri, Paula García-Lobato, Claudine Manach, Craig Knox, Roman Eisner, David S. Wishart, Augustin Scalbert

Database J. Biol. Databases Curation, 2013

2012

Phenol-Explorer 2.0: a major update of the Phenol-Explorer database integrating data on polyphenol metabolism and pharmacokinetics in humans and experimental animals.

Joseph A. Rothwell, Mireia Urpi-Sarda, Maria Boto-Ordoñez, Craig Knox, Rafael Llorach, Roman Eisner, Joseph A. Cruz, Vanessa Neveu, David S. Wishart, Claudine Manach, Cristina Andres-Lacueva, Augustin Scalbert

Database J. Biol. Databases Curation, 2012

2011

DrugBank 3.0: a comprehensive resource for 'Omics' research on drugs.

Craig Knox, Vivian Law, Timothy Jewison, Philip Liu, Son Ly, Alex Frolkis, Allison Pon, Kelly Banco, Christine Mak, Vanessa Neveu, Yannick Djoumbou, Roman Eisner, Anchi Guo, David S. Wishart

Nucleic Acids Res., 2011

2010

Phenol-Explorer: an online comprehensive database on polyphenol contents in foods.

Vanessa Neveu, Jara Perez-Jimenez, Femke Vos, Vanessa Crespy, Lerman du Chaffaut, Louise Mennen, Craig Knox, Roman Eisner, Joseph A. Cruz, David S. Wishart, Augustin Scalbert

Database J. Biol. Databases Curation, 2010

2009

HMDB: a knowledgebase for the human metabolome.

David S. Wishart, Craig Knox, Anchi Guo, Roman Eisner, Nelson Young, Bijaya Gautam, David D. Hau, Nick Psychogios, Edison Dong, Souhaila Bouatra, Rupasri Mandal, Igor Sinelnikov, Jianguo Xia, Leslie Jia, Joseph A. Cruz, Emilia Lim, Constance A. Sobsey, Savita Shrivastava, Paul Huang, Philip Liu, Lydia Fang, Jun Peng, Ryan Fradette, Dean Cheng, Dan Tzur, Melisa Clements, Avalyn Lewis, Andrea De Souza, Azaret Zuniga, Margot Dawe, Yeping Xiong, Derrick Clive, Russell Greiner, Alsu Nazyrova, Rustem Shaykhutdinov, Liang Li, Hans J. Vogel, Ian J. Forsythe

Nucleic Acids Res., 2009

2007

HMDB: the Human Metabolome Database.

David S. Wishart, Dan Tzur, Craig Knox, Roman Eisner, Anchi Guo, Nelson Young, Dean Cheng, Kevin Jewell, David Arndt, Summit Sawhney, Chris Fung, Lisa Nikolai, Mike Lewis, Marie-Aude Coutouly, Ian J. Forsythe, Peter Tang, Savita Shrivastava, Kevin Jeroncic, Paul Stothard, Godwin Amegbey, David Block, David D. Hau, James Wagner, Jessica Miniaci, Melisa Clements, Mulu Gebremedhin, Natalie Guo, Ying Zhang, Gavin E. Duggan, Glen D. MacInnis, Alim M. Weljie, Reza Dowlatabadi, Fiona Bamforth, Derrick Clive, Russell Greiner, Liang Li, Tom Marrie, Brian D. Sykes, Hans J. Vogel, Lori Querengesser

Nucleic Acids Res., 2007

Biospider: A Web Server for Automating Metabolome Annotations.

Craig Knox, Savita Shrivastava, Paul Stothard, Roman Eisner, David S. Wishart

Proceedings of the Biocomputing 2007, 2007

2006

Visual Explanation of Evidence with Additive Classifiers.

Brett Poulin, Roman Eisner, Duane Szafron, Paul Lu, Russell Greiner, David S. Wishart, Alona Fyshe, Brandon Pearcy, Cam Macdonell, John Anvik

Proceedings of the Proceedings, 2006

2005

PA-GOSUB: a searchable database of model organism protein sequences with their predicted Gene Ontology molecular function and subcellular localization.

Paul Lu, Duane Szafron, Russell Greiner, David S. Wishart, Alona Fyshe, Brandon Pearcy, Brett Poulin, Roman Eisner, Danny Ngo, Nicholas Lamb

Nucleic Acids Res., 2005

Improving Protein Function Prediction Using the Hierarchical Structure of the Gene Ontology.

Roman Eisner, Brett Poulin, Duane Szafron, Paul Lu, Russell Greiner

Proceedings of the 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2005

The Proteome Analyst Suite of Automated Function Prediction Tools.

Brett Poulin, Duane Szafron, Paul Lu, Russell Greiner, David S. Wishart, Roman Eisner, Alona Fyshe, Brandon Pearcy, Luca Pireddu

Proceedings of the Proceedings, 2005

2004

Proteome Analyst: custom predictions with explanations in a web-based tool for high-throughput proteome annotations.

Duane Szafron, Paul Lu, Russell Greiner, David S. Wishart, Brett Poulin, Roman Eisner, Zhiyong Lu, John Anvik, Cam Macdonell, Alona Fyshe, David Meeuwis

Nucleic Acids Res., 2004

Predicting subcellular localization of proteins using machine-learned classifiers.

Zhiyong Lu, Duane Szafron, Russell Greiner, Paul Lu, David S. Wishart, Brett Poulin, John Anvik, Cam Macdonell, Roman Eisner

Bioinform., 2004