Rolf Kaiser

According to our database, Rolf Kaiser authored at least 20 papers between 2001 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Generating synthetic clinical data that capture class imbalanced distributions with generative adversarial networks: Example using antiretroviral therapy for HIV.

Nicholas I-Hsien Kuo, Federico Garcia, Anders Sönnerborg, Michael Böhm, Rolf Kaiser, Maurizio Zazzi, Mark N. Polizzotto, Louisa Jorm, Sebastiano Barbieri

J. Biomed. Informatics, August, 2023

Incorporating temporal dynamics of mutations to enhance the prediction capability of antiretroviral therapy's outcome for HIV-1.

Giulia Di Teodoro, Martin Pirkl, Francesca Incardona, Ilaria Vicenti, Anders Sönnerborg, Rolf Kaiser, Laura Palagi, Maurizio Zazzi, Thomas Lengauer

CoRR, 2023

2020

Needs for an Integration of Specific Data Sources and Items - First Insights of a National Survey Within the German Center for Infection Research.

Carolin E. M. Jakob, Melanie Stecher, Sandra Fuhrmann, Sebastian Wingen-Heimann, Stephanie Heinen, Gabriele Anton, Michael Behnke, Uta Behrends, Martin Boeker, Stefanie Castell, Hans Demski, Maximilian Diefenbach, Jane C. Falgenhauer, Moritz Fritzenwanker, Petra Gastmeier, Markus Gerhard, Stephan Glöckner, Mira Golubovic, Barbara Gunsenheimer Bartmeyer, Josef Ingenerf, Rolf Kaiser, Marie-Luise Körner, Wibke Loag, Alice Mchardy, Ernst Molitor, Ulrich Nübel, Michael Pritsch, Michael Ramharter, Sigbert R. Rieg, Jan Rupp, Daniela Schindler, Dominik Schwudke, Christoph Spinner, Benjamin Stottmeier, Maria J. G. T. Vehreschild, Matthias Willmann, Jörg Janne Vehreschild

Proceedings of the German Medical Data Sciences: Bringing Data to Life - Proceedings of the Joint Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) and the Central European Network, 2020

2018

geno2pheno[ngs-freq]: a genotypic interpretation system for identifying viral drug resistance using next-generation sequencing data.

Matthias Döring, Joachim Büch, Georg Friedrich, Alejandro Pironti, Prabhav Kalaghatgi, Elena Knops, Eva Heger, Martin Obermeier, Martin Däumer, Alexander Thielen, Rolf Kaiser, Thomas Lengauer, Nico Pfeifer

Nucleic Acids Res., 2018

2013

Analysis of Physicochemical and Structural Properties Determining HIV-1 Coreceptor Usage.

Katarzyna Bozek, Thomas Lengauer, Saleta Sierra, Rolf Kaiser, Francisco S. Domingues

PLoS Comput. Biol., 2013

RegaDB: community-driven data management and analysis for infectious diseases.

Pieter Libin, Gertjan Beheydt, Koen Deforche, Stijn Imbrechts, Fossie Ferreira, Kristel Van Laethem, Kristof Theys, Ana Patricia Carvalho, Joana Cavaco-Silva, Giuseppe Lapadula, Carlo Torti, Matthias Assel, Stefan Wesner, Joke Snoeck, Jean Ruelle, Annelies De Bel, Patrick Lacor, Paul De Munter, Eric Van Wijngaerden, Maurizio Zazzi, Rolf Kaiser, Ahidjo Ayouba, Martine Peeters, Tulio de Oliveira, Luiz Carlos Júnior Alcântara, Zehava Grossman, Peter M. A. Sloot, Dan Otelea, Simona Paraschiv, Charles A. Boucher, Ricardo Camacho, Anne-Mieke Vandamme

Bioinform., 2013

2012

History-alignment models for bias-aware prediction of virological response to HIV combination therapy.

Jasmina Bogojeska, Daniel Stöckel, Maurizio Zazzi, Rolf Kaiser, Francesca Incardona, Michal Rosen-Zvi, Thomas Lengauer

Proceedings of the Fifteenth International Conference on Artificial Intelligence and Statistics, 2012

2011

Genotypic tropism testing by massively parallel sequencing: qualitative and quantitative analysis.

Martin Däumer, Rolf Kaiser, Rolf Klein, Thomas Lengauer, Bernhard Thiele, Alexander Thielen

BMC Medical Informatics Decis. Mak., 2011

2010

Chasing the AIDS virus.

Thomas Lengauer, André Altmann, Alexander Thielen, Rolf Kaiser

Commun. ACM, 2010

2008

Selecting anti-HIV therapies based on a variety of genomic and clinical factors.

Michal Rosen-Zvi, André Altmann, Mattia Prosperi, Ehud Aharoni, Hani Neuvirth, Anders Sönnerborg, Eugen Schülter, Daniel Struck, Yardena Peres, Francesca Incardona, Rolf Kaiser, Maurizio Zazzi, Thomas Lengauer

Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008

2006

Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV.

Kirsten Roomp, Niko Beerenwinkel, Tobias Sing, Eugen Schülter, Joachim Büch, Saleta Sierra-Aragon, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig

Proceedings of the Data Integration in the Life Sciences, Third International Workshop, 2006

2005

Learning Multiple Evolutionary Pathways from Cross-Sectional Data.

Niko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer

J. Comput. Biol., 2005

Computational methods for the design of effective therapies against drug resistant HIV strains.

Niko Beerenwinkel, Tobias Sing, Thomas Lengauer, Jörg Rahnenführer, Kirsten Roomp, Igor Savenkov, Roman Fischer, Daniel Hoffmann, Joachim Selbig, Klaus Korn, Hauke Walter, Thomas Berg, Patrick Braun, Gerd Fätkenheuer, Mark Oette, Jürgen K. Rockstroh, Bernd Kupfer, Rolf Kaiser, Martin Däumer

Bioinform., 2005

Mtreemix: a software package for learning and using mixture models of mutagenetic trees.

Niko Beerenwinkel, Jörg Rahnenführer, Rolf Kaiser, Daniel Hoffmann, Joachim Selbig, Thomas Lengauer

Bioinform., 2005

Characterization of Novel HIV Drug Resistance Mutations Using Clustering, Multidimensional Scaling and SVM-Based Feature Ranking.

Tobias Sing, Valentina Svicher, Niko Beerenwinkel, Francesca Ceccherini-Silberstein, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Mark Oette, Jürgen K. Rockstroh, Gerd Fätkenheuer, Carlo-Federico Perno, Thomas Lengauer

Proceedings of the Knowledge Discovery in Databases: PKDD 2005, 2005

2003

Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes.

Niko Beerenwinkel, Martin Däumer, Mark Oette, Klaus Korn, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig, Hauke Walter

Nucleic Acids Res., 2003

Methods for optimizing antiviral combination therapies.

Niko Beerenwinkel, Thomas Lengauer, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Joachim Selbig

Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology, June 29, 2003

2002

Diversity and complexity of HIV-1 drug resistance: A bioinformatics approach to predicting phenotype from genotype.

Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig

Proc. Natl. Acad. Sci. USA, 2002

2001

Geno2pheno: Interpreting Genotypic HIV Drug Resistance Tests.

Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig

IEEE Intell. Syst., 2001

Identifying drug resistance-associated patterns in HIV genotypes.

Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig

Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001