Roland Wittler

According to our database, Roland Wittler authored at least 22 papers between 2009 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2021

Detecting high-scoring local alignments in pangenome graphs.

Tizian Schulz, Roland Wittler, Sven Rahmann, Faraz Hach, Jens Stoye

Bioinform., 2021

SANS serif: alignment-free, whole-genome-based phylogenetic reconstruction.

Andreas Rempel, Roland Wittler

Bioinform., 2021

2020

Alignment- and reference-free phylogenomics with colored de Bruijn graphs.

Roland Wittler

Algorithms Mol. Biol., 2020

2019

The SCJ Small Parsimony Problem for Weighted Gene Adjacencies.

Nina Luhmann, Manuel Lafond, Annelyse Thévenin, Aïda Ouangraoua, Roland Wittler, Cédric Chauve

IEEE ACM Trans. Comput. Biol. Bioinform., 2019

2018

Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework.

Nina Luhmann, Cédric Chauve, Jens Stoye, Roland Wittler

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

Dynamic Alignment-Free and Reference-Free Read Compression.

Guillaume Holley, Roland Wittler, Jens Stoye, Faraz Hach

J. Comput. Biol., 2018

2017

Fast and Simple Jumbled Indexing for Binary RLE Strings.

Luís Felipe I. Cunha, Simone Dantas, Travis Gagie, Roland Wittler, Luis Antonio Brasil Kowada, Jens Stoye

CoRR, 2017

Fast and Simple Jumbled Indexing for Binary Run-Length Encoded Strings.

Luís Felipe I. Cunha, Simone Dantas, Travis Gagie, Roland Wittler, Luis Antonio Brasil Kowada, Jens Stoye

Proceedings of the 28th Annual Symposium on Combinatorial Pattern Matching, 2017

2016

The SCJ small parsimony problem for weighted gene adjacencies (Extended version).

Nina Luhmann, Annelyse Thévenin, Aïda Ouangraoua, Roland Wittler, Cédric Chauve

CoRR, 2016

Bloom Filter Trie: an alignment-free and reference-free data structure for pan-genome storage.

Guillaume Holley, Roland Wittler, Jens Stoye

Algorithms Mol. Biol., 2016

The SCJ Small Parsimony Problem for Weighted Gene Adjacencies.

Nina Luhmann, Annelyse Thévenin, Aïda Ouangraoua, Roland Wittler, Cédric Chauve

Proceedings of the Bioinformatics Research and Applications - 12th International Symposium, 2016

2015

Repeat- and error-aware comparison of deletions.

Roland Wittler, Tobias Marschall, Alexander Schönhuth, Veli Mäkinen

Bioinform., 2015

Bloom Filter Trie - A Data Structure for Pan-Genome Storage.

Guillaume Holley, Roland Wittler, Jens Stoye

Proceedings of the Algorithms in Bioinformatics - 15th International Workshop, 2015

2013

Correction: Unraveling overlapping deletions by agglomerative clustering.

Roland Wittler

BMC Genom., 2013

Unraveling overlapping deletions by agglomerative clustering.

Roland Wittler

BMC Genom., 2013

The Potential of Family-Free Genome Comparison.

Marília D. V. Braga, Cédric Chauve, Daniel Doerr, Katharina Jahn, Jens Stoye, Annelyse Thévenin, Roland Wittler

Proceedings of the Models and Algorithms for Genome Evolution, 2013

2012

Linearization of ancestral multichromosomal genomes.

Ján Manuch, Murray Patterson, Roland Wittler, Cédric Chauve, Eric Tannier

BMC Bioinform., 2012

2011

Consistency of Sequence-Based Gene Clusters.

Roland Wittler, Ján Manuch, Murray Patterson, Jens Stoye

J. Comput. Biol., 2011

Consistency-based detection of potential tumor-specific deletions in matched normal/tumor genomes.

Roland Wittler, Cédric Chauve

BMC Bioinform., 2011

Tractability Results for the Consecutive-Ones Property with Multiplicity.

Cédric Chauve, Ján Manuch, Murray Patterson, Roland Wittler

Proceedings of the Combinatorial Pattern Matching - 22nd Annual Symposium, 2011

2010

Consistency of Sequence-Based Gene Clusters.

Roland Wittler, Jens Stoye

Proceedings of the Comparative Genomics - International Workshop, 2010

2009

A Unified Approach for Reconstructing Ancient Gene Clusters.

Jens Stoye, Roland Wittler

IEEE ACM Trans. Comput. Biol. Bioinform., 2009