Rodrigo Weber dos Santos

Orcid: 0000-0002-0633-1391

According to our database1, Rodrigo Weber dos Santos authored at least 123 papers between 1999 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Perlin noise generation of physiologically realistic cardiac fibrosis.
Medical Image Anal., 2024

Digital twinning of the human ventricular activation sequence to Clinical 12-lead ECGs and magnetic resonance imaging using realistic Purkinje networks for in silico clinical trials.
Medical Image Anal., 2024

A novel second-order ADI Scheme for solving epidemic models with cross-diffusion.
J. Comput. Sci., 2024

Constructive fractional models through Mittag-Leffler functions.
Comput. Appl. Math., 2024

MonoWeb: Cardiac Electrophysiology Web Simulator.
Proceedings of the Computational Science - ICCS 2024, 2024

2023
A Hybrid Model for Cardiac Perfusion: Coupling a Discrete Coronary Arterial Tree Model with a Continuous Porous-Media Flow Model of the Myocardium.
Entropy, August, 2023

Polynomial chaos expansion surrogate modeling of passive cardiac mechanics using the Holzapfel-Ogden constitutive model.
J. Comput. Sci., 2023

Homogenisation for the monodomain model in the presence of microscopic fibrotic structures.
Commun. Nonlinear Sci. Numer. Simul., 2023

Studying Arrhythmic Risk with In-Silico Programmed Ventricular Stimulation and Patient-Specific Computational Models.
Proceedings of the Computational Science and Its Applications - ICCSA 2023 Workshops, 2023

Sensitivity Analysis of a Cardiac Electrophysiology Model for the Occurrence of Electrical Alternans.
Proceedings of the Computational Science and Its Applications - ICCSA 2023 Workshops, 2023

Accelerating the Simulations of Cardiac Arrhythmia with a Second-Order Numerical Method and High-Performance Computing.
Proceedings of the Computational Science and Its Applications - ICCSA 2023 Workshops, 2023

Replacing the FitzHugh-Nagumo Electrophysiology Model by Physics-Informed Neural Networks.
Proceedings of the Computational Science - ICCS 2023, 2023

2022
Finite Element Methods for Large-Strain Poroelasticity/Chemotaxis Models Simulating the Formation of Myocardial Oedema.
J. Sci. Comput., 2022

Timing the race of vaccination, new variants, and relaxing restrictions during COVID-19 pandemic.
J. Comput. Sci., 2022

Graph-based homogenisation for modelling cardiac fibrosis.
J. Comput. Phys., 2022

Forward Uncertainty Quantification and Sensitivity Analysis of the Holzapfel-Ogden Model for the Left Ventricular Passive Mechanics.
Proceedings of the Computational Science - ICCS 2022, 2022

Characterization of Foam-Assisted Water-Gas Flow via Inverse Uncertainty Quantification Techniques.
Proceedings of the Computational Science - ICCS 2022, 2022

Modeling Contrast Perfusion and Adsorption Phenomena in the Human Left Ventricle.
Proceedings of the Computational Science - ICCS 2022, 2022

Modelling and Simulation Reveals Density-Dependent Re-Entry Risk in The Infarcted Ventricles After Stem Cell-Derived Cardiomyocyte Delivery.
Proceedings of the Computing in Cardiology, 2022

Inference of Number and Location of Purkinje Root Nodes and Ventricular Conduction Properties from Clinical 12-Lead ECGs for Cardiac Digital Twinning.
Proceedings of the Computing in Cardiology, 2022

2021
Calibration of single-cell model parameters based on membrane resistance improves the accuracy of cardiac tissue simulations.
J. Comput. Sci., 2021

Mixed methods for large-strain poroelasticity/chemotaxis models simulating the formation of myocardial oedema.
CoRR, 2021

How Fast Vaccination Can Control the COVID-19 Pandemic in Brazil?
Proceedings of the Computational Science - ICCS 2021, 2021

Uncertainty Quantification of Tissue Damage Due to Blood Velocity in Hyperthermia Cancer Treatments.
Proceedings of the Computational Science - ICCS 2021, 2021

Modeling the Electromechanics of a Single Cardiac Myocyte.
Proceedings of the Computational Science - ICCS 2021, 2021

Modelling the Human Immune System Response to the ChAdOx1 nCoV-19 Vaccine.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2020
Single-variable delay-differential equation approximations of the Fitzhugh-Nagumo and Hodgkin-Huxley models.
Commun. Nonlinear Sci. Numer. Simul., 2020

Adaptive-step methods for Markov-based membrane models.
Commun. Nonlinear Sci. Numer. Simul., 2020

Validation of a yellow fever vaccine model using data from primary vaccination in children and adults, re-vaccination and dose-response in adults and studies with immunocompromised individuals.
BMC Bioinform., 2020

Simplified Models for Electromechanics of Cardiac Myocyte.
Proceedings of the Computational Science and Its Applications - ICCSA 2020, 2020

Electrotonic Effect on Action Potential Dispersion with Cellular Automata.
Proceedings of the Computational Science and Its Applications - ICCSA 2020, 2020

Improved Accuracy of Cardiac Tissue-Level Simulations by Considering Membrane Resistance as a Cellular-Level Optimization Objective.
Proceedings of the 42nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2020

A simplified model of the Human Immune System response to the COVID-19.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

Uncertain Quantification of Immunological Memory to Yellow Fever Virus.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019
On the mathematical modeling of inflammatory edema formation.
Comput. Math. Appl., 2019

A personalized computational model of edema formation in myocarditis based on long-axis biventricular MRI images.
BMC Bioinform., 2019

Combining Polynomial Chaos Expansions and Genetic Algorithm for the Coupling of Electrophysiological Models.
Proceedings of the Computational Science - ICCS 2019, 2019

Stabilized Variational Formulation for Solving Cell Response to Applied Electric Field.
Proceedings of the Computational Science - ICCS 2019, 2019

A Study of the Electrical Propagation in Purkinje Fibers.
Proceedings of the Computational Science - ICCS 2019, 2019

Stochastic Petri Net Models for the Study of Macrophage Reprogramming.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

Modeling the Increase of Interstitial Pressure During Viral Infections.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019


2018
An Optimization-Based Algorithm for the Construction of Cardiac Purkinje Network Models.
IEEE Trans. Biomed. Eng., 2018

On the use of HCM to develop a resource allocation algorithm for heterogeneous clusters.
Concurr. Comput. Pract. Exp., 2018

Performance Evaluation of Two Load Balancing Algorithms for Hybrid Clusters.
Proceedings of the High Performance Computing for Computational Science - VECPAR 2018, 2018

A Stochastic Model to Simulate the Spread of Leprosy in Juiz de Fora.
Proceedings of the Computational Science - ICCS 2018, 2018

Design and Analysis of an Undergraduate Computational Engineering Degree at Federal University of Juiz de Fora.
Proceedings of the Computational Science - ICCS 2018, 2018

A Multiscale Computational Model of Calcium-Mediated Ectopy in the Human Postinfarction Heart.
Proceedings of the Computing in Cardiology, 2018

An Hydro-Mechanical Model of Edema Formation Applied to Bacterial Myocarditis.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017
Multilevel parallelism scheme in a genetic algorithm applied to cardiac models with mass-spring systems.
J. Supercomput., 2017

Evaluation of HCM: A New Model to Predict the Execution Time of Regular Parallel Applications on a Heterogeneous Cluster.
Proceedings of the Parallel Processing and Applied Mathematics, 2017

Dynamic Load Balancing Algorithm for Heterogeneous Clusters.
Proceedings of the Parallel Processing and Applied Mathematics, 2017

Performance Evaluation of Two Load Balancing Algorithms on a Hybrid Parallel Architecture.
Proceedings of the Parallel Computing Technologies, 2017

On the use of Gillespie stochastic simulation algorithm in a model of the human immune system response to the Yellow Fever vaccine.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

A simplified mathematical-computational model of the immune response to the yellow fever vaccine.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

2016
Mind the Gap: A Semicontinuum Model for Discrete Electrical Propagation in Cardiac Tissue.
IEEE Trans. Biomed. Eng., 2016

Lattice Boltzmann method for parallel simulations of cardiac electrophysiology using GPUs.
J. Comput. Appl. Math., 2016

Computational modeling of the immune response to yellow fever.
J. Comput. Appl. Math., 2016

Simulation of cardiac perfusion by contrast in the myocardium using a formulation of flow in porous media.
J. Comput. Appl. Math., 2016

A Plasma Flow Model in the Interstitial Tissue Due to Bacterial Infection.
Proceedings of the Bioinformatics and Biomedical Engineering, 2016

Simulations of Cardiac Electrophysiology Combining GPU and Adaptive Mesh Refinement Algorithms.
Proceedings of the Bioinformatics and Biomedical Engineering, 2016

Reactive Interstitial and Reparative Fibrosis as Substrates for Cardiac Ectopic Pacemakers and Reentries.
Proceedings of the Bioinformatics and Biomedical Engineering, 2016

A Parallel Model for Heterogeneous Cluster.
Proceedings of the Algorithms and Architectures for Parallel Processing, 2016

Improving the Performance of Cardiac Simulations in a Multi-GPU Architecture Using a Coalesced Data and Kernel Scheme.
Proceedings of the Algorithms and Architectures for Parallel Processing, 2016

Machine Learning Approaches to Estimate Simulated Cardiac Ejection Fraction from Electrical Impedance Tomography.
Proceedings of the Advances in Artificial Intelligence - IBERAMIA 2016, 2016

2015
Uniformization Method for Solving Cardiac Electrophysiology Models Based on the Markov-Chain Formulation.
IEEE Trans. Biomed. Eng., 2015

On the use of multiple heterogeneous devices to speedup the execution of a computational model of the Human Immune System.
Appl. Math. Comput., 2015

Performance Evaluation of a Human Immune System Simulator on a GPU Cluster.
Proceedings of the Parallel Computing Technologies - 13th International Conference, PaCT 2015, Petrozavodsk, Russia, August 31, 2015

A Parallel Genetic Algorithm to Adjust a Cardiac Model Based on Cellular Automaton and Mass-Spring Systems.
Proceedings of the Parallel Computing Technologies - 13th International Conference, PaCT 2015, Petrozavodsk, Russia, August 31, 2015

On a Dynamic Scheduling Approach to Execute OpenCL Jobs on APUs.
Proceedings of the High Performance Computing - Second Latin American Conference, 2015

2014
A GPU-based heart simulator with mass-spring systems and cellular automaton.
J. Supercomput., 2014

An Efficient Finite Element Approach for Modeling Fibrotic Clefts in the Heart.
IEEE Trans. Biomed. Eng., 2014

Artificial Neural Networks Ensemble Applied to the Electrical Impedance Tomography Problem to Determine the Cardiac Ejection Fraction.
Proceedings of the Advances in Artificial Intelligence - IBERAMIA 2014, 2014

2013
Electroanatomical Characterization of Atrial Microfibrosis in a Histologically Detailed Computer Model.
IEEE Trans. Biomed. Eng., 2013

Solving the cardiac bidomain equations using graphics processing units.
J. Comput. Sci., 2013

Comparing high performance techniques for the automatic generation of efficient solvers of cardiac cell models.
Computing, 2013

On the computational modeling of the innate immune system.
BMC Bioinform., 2013

3D Heart Modeling with Cellular Automata, Mass-Spring System and CUDA.
Proceedings of the Parallel Computing Technologies - 12th International Conference, 2013

Determination of Cardiac Ejection Fraction by Electrical Impedance Tomography Using an Artificial Neural Network.
Proceedings of the Advances in Soft Computing and Its Applications, 2013

Genetic Algorithm for the History Matching Problem.
Proceedings of the International Conference on Computational Science, 2013

2012
Influence of ischemic core muscle fibers on surface depolarization potentials in superfused cardiac tissue preparations: a simulation study.
Medical Biol. Eng. Comput., 2012

Advanced computing solutions for health care and medicine.
J. Comput. Sci., 2012

A parallel accelerated adaptive mesh algorithm for the solution of electrical models of the heart.
Int. J. High Perform. Syst. Archit., 2012

Computational Modeling of Microabscess Formation.
Comput. Math. Methods Medicine, 2012

Simulations of Complex and Microscopic Models of Cardiac Electrophysiology Powered by Multi-GPU Platforms.
Comput. Math. Methods Medicine, 2012

A Three-Dimensional Computational Model of the Innate Immune System.
Proceedings of the Computational Science and Its Applications - ICCSA 2012, 2012

An Adaptive Mesh Algorithm for the Numerical Solution of Electrical Models of the Heart.
Proceedings of the Computational Science and Its Applications - ICCSA 2012, 2012

System Dynamics Metamodels Supporting the Development of Computational Models of the Human Innate Immune System.
Proceedings of the Computational Science and Its Applications - ICCSA 2012, 2012

Comparison between Genetic Algorithms and Differential Evolution for Solving the History Matching Problem.
Proceedings of the Computational Science and Its Applications - ICCSA 2012, 2012

An Electro-Mechanical Cardiac Simulator Based on Cellular Automata and Mass-Spring Models.
Proceedings of the Cellular Automata, 2012

2011
A Macro Finite-Element Formulation for Cardiac Electrophysiology Simulations Using Hybrid Unstructured Grids.
IEEE Trans. Biomed. Eng., 2011

Biomedical and Bioinformatics Challenges to Computer Science: Bioinformatics, Modeling of Biomedical Systems and Clinical Applications.
Proceedings of the International Conference on Computational Science, 2011

Adaptive Time Step for Cardiac Myocyte Models.
Proceedings of the International Conference on Computational Science, 2011

Accelerating cardiac excitation spread simulations using graphics processing units.
Concurr. Comput. Pract. Exp., 2011

Comparing CUDA, OpenCL and OpenGL Implementations of the Cardiac Monodomain Equations.
Proceedings of the Parallel Processing and Applied Mathematics, 2011

Implementation of a Computational Model of the Innate Immune System.
Proceedings of the Artificial Immune Systems - 10th International Conference, 2011

A finite element approach for modeling micro-structural discontinuities in the heart.
Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011

2010
Biomedical and bioinformatics challenges to computer science.
Proceedings of the International Conference on Computational Science, 2010

Special section: Biomedical and bioinformatics challenges to computer science.
Future Gener. Comput. Syst., 2010

Approaching cardiac modeling challenges to computer science with CellML-based web tools.
Future Gener. Comput. Syst., 2010

Parallel Implementation of a Computational Model of the HIS Using OpenMP and MPI.
Proceedings of the 22nd International Symposium on Computer Architecture and High Performance Computing Workshops, 2010

Performance Evaluation of a Reservoir Simulator on a Multi-core Cluster.
Proceedings of the Computational Science and Its Applications, 2010

Automatic History Matching in Petroleum Reservoirs Using the TSVD Method.
Proceedings of the Computational Science and Its Applications, 2010

Parallel Implementation of a Computational Model of the Human Immune System.
Proceedings of the Euro-Par 2010 Parallel Processing Workshops, 2010

2009
Multi-Level Parallelism for the Cardiac Bidomain Equations.
Int. J. Parallel Program., 2009

Simulations of the Electrical Activity in the Heart with Graphic Processing Units.
Proceedings of the Parallel Processing and Applied Mathematics, 2009

Comparing CUDA and OpenGL implementations for a Jacobi iteration.
Proceedings of the 2009 International Conference on High Performance Computing & Simulation, 2009

Comparing Genetic Algorithms and Newton-Like Methods for the Solution of the History Matching Problem.
Proceedings of the Computational Science, 2009

Determination of Cardiac Ejection Fraction by Electrical Impedance Tomography - Numerical Experiments and Viability Analysis.
Proceedings of the Computational Science, 2009

CelOWS: A Service Oriented Architecture to Define, Query and Reuse Biological Models.
Proceedings of the Computational Science, 2009

Bioinformatics' Challenges to Computer Science: Bioinformatics Tools and Biomedical Modeling.
Proceedings of the Computational Science, 2009

GridSnake: A Grid-based implementation of the Snake segmentation algorithm.
Proceedings of the Twenty-Second IEEE International Symposium on Computer-Based Medical Systems, 2009

2008
Automatic Segmentation of Cardiac MRI Using Snakes and Genetic Algorithms.
Proceedings of the Computational Science, 2008

Web Applications Supporting the Development of Models of Chagas' Disease for Left Ventricular Myocytes of Adult Rats.
Proceedings of the Computational Science, 2008

Bioinformatics' Challenges to Computer Science.
Proceedings of the Computational Science, 2008

2007
Algebraic Multigrid Preconditioner for the Cardiac Bidomain Model.
IEEE Trans. Biomed. Eng., 2007

Multi-level Parallelism in the Computational Modeling of the Heart.
Proceedings of the 19th Symposium on Computer Architecture and High Performance Computing (SBAC-PAD 2007), 2007

2006
A Computational Framework for Cardiac Modeling Based on Distributed Computing and Web Applications.
Proceedings of the High Performance Computing for Computational Science, 2006

Performance Comparison of Parallel Geometric and Algebraic Multigrid Preconditioners for the Bidomain Equations.
Proceedings of the Computational Science, 2006

A Transformation Tool for ODE Based Models.
Proceedings of the Computational Science, 2006

2004
Parallel multigrid preconditioner for the cardiac bidomain model.
IEEE Trans. Biomed. Eng., 2004

2003
On the Influence of a Volume Conductor on the Orientation of Currents in a Thin Cardiac Tissue.
Proceedings of the Functional Imaging and Modeling of the Heart, 2003

1999
A Survey of Messaging Software Issues and Systems for Myrinet-Based.
Parallel Distributed Comput. Pract., 1999


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