Robrecht Cannoodt

According to our database, Robrecht Cannoodt authored at least 8 papers between 2020 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Viash: A meta-framework for building reusable workflow modules.

Robrecht Cannoodt, Hendrik Cannoodt, Dries Schaumont, Kai Waldrant, Eric Van de Kerckhove, Andy Boschmans, Dries De Maeyer, Toni Verbeiren

J. Open Source Softw., February, 2024

A benchmark for prediction of transcriptomic responses to chemical perturbations across cell types.

Artur Szalata, Andrew Benz, Robrecht Cannoodt, Mauricio Cortes, Jason Fong, Sunil Kuppasani, Richard Lieberman, Tianyu Liu, Javier Mas-Rosario, Rico Meinl, Jalil Nourisa, Jared Tumiel, Tin M. Tunjic, Mengbo Wang, Noah Weber, Hongyu Zhao, Benedict Anchang, Fabian J. Theis, Malte Luecken, Daniel Burkhardt

Proceedings of the Advances in Neural Information Processing Systems 38: Annual Conference on Neural Information Processing Systems 2024, 2024

2021

Viash: from scripts to pipelines.

Robrecht Cannoodt, Hendrik Cannoodt, Eric Van de Kerckhove, Andy Boschmans, Dries De Maeyer, Toni Verbeiren

CoRR, 2021

A sandbox for prediction and integration of DNA, RNA, and proteins in single cells.

Malte Lücken, Daniel Burkhardt, Robrecht Cannoodt, Christopher Lance, Aditi Agrawal, Hananeh Aliee, Ann Chen, Louise Deconinck, Angela Detweiler, Alejandro Granados, Shelly Huynh, Laura Isacco, Yang Kim, Dominik Klein, Bony de Kumar, Sunil Kuppasani, Heiko Lickert, Aaron McGeever, Joaquin Melgarejo, Honey Mekonen, Maurizio Morri, Michaela Müller, Norma Neff, Sheryl Paul, Bastian Rieck, Kaylie Schneider, Scott Steelman, Michael Sterr, Daniel Treacy, Alexander Tong, Alexandra-Chloé Villani, Guilin Wang, Jia Yan, Ce Zhang, Angela Pisco, Smita Krishnaswamy, Fabian J. Theis, Jonathan M. Bloom

Proceedings of the Neural Information Processing Systems Track on Datasets and Benchmarks 1, 2021

Multimodal single cell data integration challenge: Results and lessons learned.

Christopher Lance, Malte D. Lücken, Daniel B. Burkhardt, Robrecht Cannoodt, Pia Rautenstrauch, Anna Laddach, Aidyn Ubingazhibov, Zhi-Jie Cao, Kaiwen Deng, Sumeer Khan, Qiao Liu, Nikolay Russkikh, Gleb Ryazantsev, Uwe Ohler, Angela Oliveira Pisco, Jonathan Bloom, Smita Krishnaswamy, Fabian J. Theis

Proceedings of the NeurIPS 2021 Competitions and Demonstrations Track, 2021

2020

The Rockerverse: Packages and Applications for Containerisation with R.

Daniel Nüst, Dirk Eddelbuettel, Dom Bennett, Robrecht Cannoodt, Dav Clark, Gergely Daroczi, Mark Edmondson, Colin Fay, Ellis Hughes, Lars Kjeldgaard, Sean Lopp, Ben Marwick, Heather Nolis, Jacqueline Nolis, Hong Ooi, Karthik Ram, Noam Ross, Lori A. Shepherd, Péter Sólymos, Tyson Lee Swetnam, Nitesh Turaga, Charlotte Van Petegem, Jason Williams, Craig Willis, Nan Xiao

R J., 2020

The Rockerverse: Packages and Applications for Containerization with R.

Daniel Nüst, Dirk Eddelbuettel, Dom Bennett, Robrecht Cannoodt, Dav Clark, Gergely Daroczi, Mark Edmondson, Colin Fay, Ellis Hughes, Sean Lopp, Ben Marwick, Heather Nolis, Jacqueline Nolis, Hong Ooi, Karthik Ram, Noam Ross, Lori A. Shepherd, Nitesh Turaga, Craig Willis, Nan Xiao, Charlotte Van Petegem

CoRR, 2020

TinGa: fast and flexible trajectory inference with Growing Neural Gas.

Helena Todorov, Robrecht Cannoodt, Wouter Saelens, Yvan Saeys

Bioinform., 2020