Rob J. De Boer

According to our database, Rob J. De Boer authored at least 19 papers between 2006 and 2021.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of four.

2021

The limitations, dangers, and benefits of simple methods for testing identifiability.

Mario Castro, Rob J. De Boer

PLoS Comput. Biol., 2021

Challenges in cybersecurity: Lessons from biological defense systems.

Edward C. Schrom II, Ann Kinzig, Stephanie Forrest, Andrea L. Graham, Simon A. Levin, Carl T. Bergstrom, Carlos Castillo-Chavez, James P. Collins, Rob J. De Boer, Adam Doupé, Roya Ensafi, Stuart I. Feldman, Bryan T. Grenfell, J. Alex Halderman, Silvie Huijben, Carlo C. Maley, Melanie E. Moses, Alan S. Perelson, Charles Perrings, Joshua B. Plotkin, Jennifer Rexford, Mohit Tiwari

CoRR, 2021

2020

Testing structural identifiability by a simple scaling method.

Mario Castro, Rob J. De Boer

PLoS Comput. Biol., November, 2020

2019

Toxin production spontaneously becomes regulated by local cell density in evolving bacterial populations.

Hilje M. Doekes, Rob J. De Boer, Rutger Hermsen

PLoS Comput. Biol., 2019

2016

RTCR: a pipeline for complete and accurate recovery of T cell repertoires from high throughput sequencing data.

Bram Gerritsen, Aridaman Pandit, Arno C. Andeweg, Rob J. De Boer

Bioinform., 2016

2015

Crawling and Gliding: A Computational Model for Shape-Driven Cell Migration.

Ioana Niculescu, Johannes Textor, Rob J. De Boer

PLoS Comput. Biol., 2015

Reconciling Estimates of Cell Proliferation from Stable Isotope Labeling Experiments.

Raya Ahmed, Liset Westera, Julia Drylewicz, Marjet Elemans, Yan Zhang, Elizabeth Kelly, Rajko Reljic, Kiki Tesselaar, Rob J. De Boer, Derek C. Macallan, José A. M. Borghans, Becca Asquith

PLoS Comput. Biol., 2015

2014

Random Migration and Signal Integration Promote Rapid and Robust T Cell Recruitment.

Johannes Textor, Sarah E. Henrickson, Judith N. Mandl, Ulrich H. von Andrian, Jürgen Westermann, Rob J. De Boer, Joost B. Beltman

PLoS Comput. Biol., 2014

Immuno-epidemiological Modeling of HIV-1 Predicts High Heritability of the Set-Point Virus Load, while Selection for CTL Escape Dominates Virulence Evolution.

Christiaan H. van Dorp, Michiel van Boven, Rob J. De Boer

PLoS Comput. Biol., 2014

2013

Virus Encoded MHC-Like Decoys Diversify the Inhibitory KIR Repertoire.

Paola Carrillo-Bustamante, Can Kesmir, Rob J. De Boer

PLoS Comput. Biol., 2013

A new model to simulate and analyze proliferating cell populations in BrdU labeling experiments.

Daniella Schittler, Frank Allgöwer, Rob J. De Boer

BMC Syst. Biol., 2013

Analytical results on the Beauchemin model of lymphocyte migration.

Johannes Textor, Mathieu Sinn, Rob J. De Boer

BMC Bioinform., 2013

2012

Chemotactic Migration of T Cells towards Dendritic Cells Promotes the Detection of Rare Antigens.

Renske M. A. Vroomans, Athanasius F. M. Marée, Rob J. De Boer, Joost B. Beltman

PLoS Comput. Biol., 2012

Degenerate T-cell Recognition of Peptides on MHC Molecules Creates Large Holes in the T-cell Repertoire.

Jorg J. A. Calis, Rob J. De Boer, Can Kesmir

PLoS Comput. Biol., 2012

Which of Our Modeling Predictions Are Robust?

Rob J. De Boer

PLoS Comput. Biol., 2012

2010

Explicit Kinetic Heterogeneity: Mathematical Models for Interpretation of Deuterium Labeling of Heterogeneous Cell Populations.

Vitaly V. Ganusov, José A. M. Borghans, Rob J. De Boer

PLoS Comput. Biol., 2010

Current Estimates for HIV-1 Production Imply Rapid Viral Clearance in Lymphoid Tissues.

Rob J. De Boer, Ruy M. Ribeiro, Alan S. Perelson

PLoS Comput. Biol., 2010

2008

Dynamics of Immune Escape during HIV/SIV Infection.

Christian L. Althaus, Rob J. De Boer

PLoS Comput. Biol., 2008

2006

Estimating Costs and Benefits of CTL Escape Mutations in SIV/HIV Infection.

Vitaly V. Ganusov, Rob J. De Boer

PLoS Comput. Biol., 2006