Rick L. Stevens
Orcid: 0000-0002-4268-4020Affiliations:
- Argonne National Laboratory, Lemont, Illinois, USA
According to our database1,
Rick L. Stevens
authored at least 136 papers
between 1987 and 2024.
Collaborative distances:
Collaborative distances:
Awards
ACM Fellow
ACM Fellow 2020, "For contributions in high-performance computing systems, collaborative environments, and tools for large-scale science initiatives".
Timeline
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Online presence:
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on orcid.org
On csauthors.net:
Bibliography
2024
CoRR, 2024
Assessing Reusability of Deep Learning-Based Monotherapy Drug Response Prediction Models Trained with Omics Data.
CoRR, 2024
Causal Discovery over High-Dimensional Structured Hypothesis Spaces with Causal Graph Partitioning.
CoRR, 2024
High Performance Binding Affinity Prediction with a Transformer-Based Surrogate Model.
Proceedings of the IEEE International Parallel and Distributed Processing Symposium, 2024
Proceedings of the Forty-first International Conference on Machine Learning, 2024
Proceedings of the Twelfth International Conference on Learning Representations, 2024
2023
Int. J. High Perform. Comput. Appl., November, 2023
Comput. Graph. Forum, June, 2023
Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR.
Nucleic Acids Res., January, 2023
DeepSpeed4Science Initiative: Enabling Large-Scale Scientific Discovery through Sophisticated AI System Technologies.
CoRR, 2023
Proceedings of the 13th Workshop on Hyperspectral Imaging and Signal Processing: Evolution in Remote Sensing, 2023
Proceedings of the SC '23 Workshops of The International Conference on High Performance Computing, 2023
Entropy-Based Regularization on Deep Learning Models for Anti-Cancer Drug Response Prediction.
Proceedings of the SC '23 Workshops of The International Conference on High Performance Computing, 2023
Causal Discovery and Optimal Experimental Design for Genome-Scale Biological Network Recovery.
Proceedings of the Platform for Advanced Scientific Computing Conference, 2023
WordScape: a Pipeline to extract multilingual, visually rich Documents with Layout Annotations from Web Crawl Data.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023
Transferable Graph Neural Fingerprint Models for Quick Response to Future Bio-Threats.
Proceedings of the International Conference on Machine Learning and Applications, 2023
An Automation Framework for Comparison of Cancer Response Models Across Configurations.
Proceedings of the 19th IEEE International Conference on e-Science, 2023
Trillion Parameter AI Serving Infrastructure for Scientific Discovery: A Survey and Vision.
Proceedings of the IEEE/ACM 10th International Conference on Big Data Computing, 2023
2022
High-Throughput Virtual Screening and Validation of a SARS-CoV-2 Main Protease Noncovalent Inhibitor.
J. Chem. Inf. Model., 2022
Intelligent resolution: Integrating Cryo-EM with AI-driven multi-resolution simulations to observe the severe acute respiratory syndrome coronavirus-2 replication-transcription machinery in action.
Int. J. High Perform. Comput. Appl., 2022
Early detection of emerging SARS-CoV-2 variants of interest for experimental evaluation.
Frontiers Bioinform., 2022
Deep learning methods for drug response prediction in cancer: predominant and emerging trends.
CoRR, 2022
Briefings Bioinform., 2022
Proceedings of the Tenth International Conference on Learning Representations, 2022
2021
Accelerating Scientific Applications With SambaNova Reconfigurable Dataflow Architecture.
Comput. Sci. Eng., 2021
Learning from learning machines: a new generation of AI technology to meet the needs of science.
CoRR, 2021
Protein-Ligand Docking Surrogate Models: A SARS-CoV-2 Benchmark for Deep Learning Accelerated Virtual Screening.
CoRR, 2021
Scaffold Embeddings: Learning the Structure Spanned by Chemical Fragments, Scaffolds and Compounds.
CoRR, 2021
Pandemic Drugs at Pandemic Speed: Accelerating COVID-19 Drug Discovery with Hybrid Machine Learning- and Physics-based Simulations on High Performance Computers.
CoRR, 2021
BMC Bioinform., 2021
A genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes.
Briefings Bioinform., 2021
AgEBO-tabular: joint neural architecture and hyperparameter search with autotuned data-parallel training for tabular data.
Proceedings of the International Conference for High Performance Computing, 2021
Proceedings of the PASC '21: Platform for Advanced Scientific Computing Conference, 2021
Proceedings of the ICPP 2021: 50th International Conference on Parallel Processing, Lemont, IL, USA, August 9, 2021
Proceedings of the ICONS 2021: International Conference on Neuromorphic Systems 2021, 2021
2020
Nucleic Acids Res., 2020
CoRR, 2020
Regression Enrichment Surfaces: a Simple Analysis Technique for Virtual Drug Screening Models.
CoRR, 2020
CoRR, 2020
CoRR, 2020
A Systematic Approach to Featurization for Cancer Drug Sensitivity Predictions with Deep Learning.
CoRR, 2020
High-bypass Learning: Automated Detection of Tumor Cells That Significantly Impact Drug Response.
Proceedings of the 6th IEEE/ACM Workshop on Machine Learning in High Performance Computing Environments, 2020
Proceedings of the PACT '20: International Conference on Parallel Architectures and Compilation Techniques, 2020
2019
Briefings Bioinform., 2019
Scalable reinforcement-learning-based neural architecture search for cancer deep learning research.
Proceedings of the International Conference for High Performance Computing, 2019
Performance, Energy, and Scalability Analysis and Improvement of Parallel Cancer Deep Learning CANDLE Benchmarks.
Proceedings of the 48th International Conference on Parallel Processing, 2019
2018
CoRR, 2018
BMC Bioinform., 2018
CANDLE/Supervisor: a workflow framework for machine learning applied to cancer research.
BMC Bioinform., 2018
Portable and Reusable Deep Learning Infrastructure with Containers to Accelerate Cancer Studies.
Proceedings of the 4th International Workshop on Extreme Scale Programming Models and Middleware, 2018
2017
Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.
Nucleic Acids Res., 2017
Deep Learning in Cancer and Infectious Disease: Novel Driver Problems for Future HPC Architecture.
Proceedings of the 26th International Symposium on High-Performance Parallel and Distributed Computing, 2017
2014
Nucleic Acids Res., 2014
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).
Nucleic Acids Res., 2014
2013
Large-Scale Modeling of Epileptic Seizures: Scaling Properties of Two Parallel Neuronal Network Simulation Algorithms.
Comput. Math. Methods Medicine, 2013
2012
Bioinform., 2012
2011
Int. J. High Perform. Comput. Appl., 2011
HPCS 2011 keynotes: Tuesday keynote I: High-performance computing and biology: The quest for a predictive biological theory.
Proceedings of the 2011 International Conference on High Performance Computing & Simulation, 2011
2010
BMC Bioinform., 2010
Analysis of the Effect of Reversibility Constraints on the Predictions of Genome-Scale Metabolic Models.
Proceedings of the Advances in Bioinformatics, 2010
2009
The GAAS Metagenomic Tool and Its Estimations of Viral and Microbial Average Genome Size in Four Major Biomes.
PLoS Comput. Biol., 2009
The International Exascale Software Project: a Call To Cooperative Action By the Global High-Performance Community.
Int. J. High Perform. Comput. Appl., 2009
Inferring a Species Tree from Gene Trees in the Presence of HGT.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2009
Proceedings of the Bioinformatics and Computational Biology, 2009
2008
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes.
BMC Bioinform., 2008
Multi-Parallel Open Technology to Enable Collaborative Volume Visualization: How to Create Global Immersive Virtual Anatomy Classrooms.
Proceedings of the Medicine Meets Virtual Reality 16, 2008
SWARM: a scientific workflow for supporting bayesian approaches to improve metabolic models.
Proceedings of the 6th International Workshop on Challenges of Large Applications in Distributed Environments, 2008
2007
The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation.
Nucleic Acids Res., 2007
Immersive Virtual Anatomy Course using a Cluster of Volume Visualization Machines and Passive Stereo.
Proceedings of the Medicine Meets Virtual Reality 15, 2007
Proceedings of the 21th International Parallel and Distributed Processing Symposium (IPDPS 2007), 2007
2006
Proceedings of the IEEE Virtual Reality Conference, 2006
Proceedings of the 20th International Parallel and Distributed Processing Symposium (IPDPS 2006), 2006
Proceedings of IEEE International Conference on Communications, 2006
TeraGrid: Analysis of Organization, System Architecture, and Middleware Enabling New Types of Applications.
Proceedings of the High Performance Computing and Grids in Action, 2006
Proceedings of the Parallel Processing for Scientific Computing, 2006
2005
ACM Trans. Graph., 2005
Proceedings of the ACM/IEEE SC2005 Conference on High Performance Networking and Computing, 2005
Proceedings of the Seventh IEEE International Symposium on Multimedia (ISM 2005), 2005
Proceedings of the From Grid to Healthgrid, 2005
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2005
An Infrastructure of Network Services for Seamless Integration in Advanced Collaborative Computing Environments.
Proceedings of the 2005 IEEE International Conference on Cluster Computing (CLUSTER 2005), September 26, 2005
Proceedings of the 2005 Challenges of Large Applications in Distributed Environments, 2005
2004
IEEE Trans. Vis. Comput. Graph., 2004
Life Sciences and Cyberinfrastructure: Dual and Interacting Revolutions that will Drive Future Science.
New Gener. Comput., 2004
Neurocomputing, 2004
Isocoupling: Reusing Kernel Coupling Values to Predict the Performance of Parallel Applications.
Proceedings of the 18th International Parallel and Distributed Processing Symposium (IPDPS 2004), 2004
Proceedings of the 4th IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGrid 2004), 2004
Proceedings of the Grid 2 - Blueprint for a New Computing Infrastructure, Second Edition, 2004
2003
Prophesy: an infrastructure for performance analysis and modeling of parallel and grid applications.
SIGMETRICS Perform. Evaluation Rev., 2003
Using Kernel Coupling to Improve the Performance of Multithreaded Applications.
Proceedings of the ISCA 16th International Conference on Parallel and Distributed Computing Systems, 2003
2002
LAM: luminance attenuation map for photometric uniformity in projection based displays.
Proceedings of the ACM Symposium on Virtual Reality Software and Technology, 2002
Proceedings of the 16th International Parallel and Distributed Processing Symposium (IPDPS 2002), 2002
Proceedings of the 11th IEEE International Symposium on High Performance Distributed Computing (HPDC-11 2002), 2002
2001
Design and Development of the Prophesy Performance Database for Distributed Scientific Applications.
Proceedings of the Tenth SIAM Conference on Parallel Processing for Scientific Computing, 2001
Proceedings of the 3rd Annual International Workshop on Active Middleware Services (AMS 2001), 2001
2000
Data management for large-scale scientific computations in high performance distributed systems.
Clust. Comput., 2000
IEEE Computer Graphics and Applications, 2000
The Ten Hottest Topics in Parallel and Distributed Computing for the Next Millennium.
Proceedings of the 14th International Parallel & Distributed Processing Symposium (IPDPS'00), 2000
Prophesy: An Infrastructure for Analyzing and Modeling the Performance of Parallel and Distributed Applications.
Proceedings of the Ninth IEEE International Symposium on High Performance Distributed Computing, 2000
1999
Capstone Address: ActiveSpaces - The Access Grid, Active Mural and Advanced Visualization Systems.
Proceedings of the 10th IEEE Visualization Conference, 1999
1997
J. Parallel Distributed Comput., 1997
Proceedings of the 6th International Symposium on High Performance Distributed Computing, 1997
Proceedings of the 6th Heterogeneous Computing Workshop, 1997
Proceedings of the 1997 International Conference on Application-Specific Systems, 1997
1996
Toward high-performance computational chemistry: II. A scalable self-consistent field program.
J. Comput. Chem., 1996
Performance Modeling of Interactive, Immersive Virtual Environments for Finite Element Simulations.
Int. J. High Perform. Comput. Appl., 1996
Int. J. High Perform. Comput. Appl., 1996
IEEE Computer Graphics and Applications, 1996
IEEE Computer Graphics and Applications, 1996
Proceedings of the 5th International Symposium on High Performance Distributed Computing (HPDC '96), 1996
Proceedings of the 5th International Symposium on High Performance Distributed Computing (HPDC '96), 1996
A Decomposition Method For Efficient Use Of Distributed Supercomputers For Finite Element Applications.
Proceedings of the 1996 International Conference on Application-Specific Systems, 1996
1995
IEEE Parallel Distributed Technol. Syst. Appl., 1995
IEEE Parallel Distributed Technol. Syst. Appl., 1995
Proceedings of the Proceedings Supercomputing '95, San Diego, CA, USA, December 4-8, 1995, 1995
1994
Multimedia Supercomputing: The Use of Supercomputers to Drive High-Performance Multimedia Systems and Virtual Environments.
Proceedings of the Third International Symposium on High Performance Distributed Computing, 1994
1991
Parallel Scalability of the Spectral Transform Method.
Proceedings of the Fifth SIAM Conference on Parallel Processing for Scientific Computing, 1991
1990
Parallel Programming with Algorithmic Motifs.
Proceedings of the 1990 International Conference on Parallel Processing, 1990
Proceedings of the 10th International Conference on Automated Deduction, 1990
1989
J. Autom. Reason., 1989
1988
Scheduling OR-Parallelism: An Argonne Perspective.
Proceedings of the Logic Programming, 1988
The Aurora Or-Parallel Prolog System.
Proceedings of the International Conference on Fifth Generation Computer Systems, 1988
Proceedings of the 9th International Conference on Automated Deduction, 1988
1987
J. Autom. Reason., 1987