Richard J. B. Dobson

Orcid: 0000-0003-4224-9245

Affiliations:
  • Kings College London, UK


According to our database1, Richard J. B. Dobson authored at least 98 papers between 2006 and 2024.

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Bibliography

2024
Predicting Future Disorders via Temporal Knowledge Graphs and Medical Ontologies.
IEEE J. Biomed. Health Informatics, July, 2024

RADAR-IoT: An Open-Source, Interoperable, and Extensible IoT Gateway Framework for Health Research.
Sensors, July, 2024

Large-scale digital phenotyping: identifying depression and anxiety indicators in a general UK population with over 10,000 participants.
CoRR, 2024

Improving Extraction of Clinical Event Contextual Properties from Electronic Health Records: A Comparative Study.
CoRR, 2024

How Deep is your Guess? A Fresh Perspective on Deep Learning for Medical Time-Series Imputation.
CoRR, 2024

A pilot protocol and cohort for the investigation of non-pathological variability in speech.
CoRR, 2024

Unveiling the Secrets: How Masking Strategies Shape Time Series Imputation.
CoRR, 2024

Uncertainty-Aware Deep Attention Recurrent Neural Network for Heterogeneous Time Series Imputation.
CoRR, 2024

Detecting Clinical Intent in Electronic Healthcare Records in a UK National Healthcare Hospital.
Proceedings of the 12th IEEE International Conference on Healthcare Informatics, 2024


2023
Trustworthy Data and AI Environments for Clinical Prediction: Application to Crisis-Risk in People With Depression.
IEEE J. Biomed. Health Informatics, November, 2023

Automatic Assessment of the 2-Minute Walk Distance for Remote Monitoring of People with Multiple Sclerosis.
Sensors, July, 2023

Discharge summary hospital course summarisation of in patient Electronic Health Record text with clinical concept guided deep pre-trained Transformer models.
J. Biomed. Informatics, May, 2023

DNAscan2: a versatile, scalable, and user-friendly analysis pipeline for human next-generation sequencing data.
Bioinform., April, 2023

AI chatbots not yet ready for clinical use.
Frontiers Digit. Health, March, 2023

Long-term participant retention and engagement patterns in an app and wearable-based multinational remote digital depression study.
npj Digit. Medicine, 2023

Knowledge Enhanced Conditional Imputation for Healthcare Time-series.
CoRR, 2023

Identifying depression-related topics in smartphone-collected free-response speech recordings using an automatic speech recognition system and a deep learning topic model.
CoRR, 2023

Disease Insight through Digital Biomarkers Developed by Remotely Collected Wearables and Smartphone Data.
CoRR, 2023

Addressing Class Imbalance in Electronic Health Records Data Imputation.
Proceedings of the 6th International Workshop on Knowledge Discovery from Healthcare Data co-located with 32nd International Joint Conference on Artificial Intelligence (IJCAI 2023), 2023

Towards robust paralinguistic assessment for real-world mobile health (mHealth) monitoring: an initial study of reverberation effects on speech.
Proceedings of the 24th Annual Conference of the International Speech Communication Association, 2023

Classifying depression symptom severity: Assessment of speech representations in personalized and generalized machine learning models.
Proceedings of the 24th Annual Conference of the International Speech Communication Association, 2023

Validating Transformers for Redaction of Text from Electronic Health Records in Real-World Healthcare.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

2022
A Knowledge Distillation Ensemble Framework for Predicting Short- and Long-Term Hospitalization Outcomes From Electronic Health Records Data.
IEEE J. Biomed. Health Informatics, 2022

Fitbeat: COVID-19 estimation based on wristband heart rate using a contrastive convolutional auto-encoder.
Pattern Recognit., 2022

A survey on clinical natural language processing in the United Kingdom from 2007 to 2022.
npj Digit. Medicine, 2022

Digital health tools for the passive monitoring of depression: a systematic review of methods.
npj Digit. Medicine, 2022

GEOexplorer: a webserver for gene expression analysis and visualisation.
Nucleic Acids Res., 2022

An implementation framework and a feasibility evaluation of a clinical decision support system for diabetes management in secondary mental healthcare using CogStack.
BMC Medical Informatics Decis. Mak., 2022

Patient-centric characterization of multimorbidity trajectories in patients with severe mental illnesses: A temporal bipartite network modeling approach.
J. Biomed. Informatics, 2022

Transforming and evaluating the UK Biobank to the OMOP Common Data Model for COVID-19 research and beyond.
J. Am. Medical Informatics Assoc., 2022

An assessment of bioinformatics tools for the detection of human endogenous retroviral insertions in short-read genome sequencing data.
Frontiers Bioinform., 2022

Foresight - Deep Generative Modelling of Patient Timelines using Electronic Health Records.
CoRR, 2022

Summarisation of Electronic Health Records with Clinical Concept Guidance.
CoRR, 2022

Predicting Clinical Intent from Free Text Electronic Health Records.
CoRR, 2022

The utility of wearable devices in assessing ambulatory impairments of people with multiple sclerosis in free-living conditions.
Comput. Methods Programs Biomed., 2022

CogStack Cohort at TREC 2022 Clinical Trials Track.
Proceedings of the Thirty-First Text REtrieval Conference, 2022

Multi-modal Latent-Space Self-alignment for Super-Resolution Cardiac MR Segmentation.
Proceedings of the Statistical Atlases and Computational Models of the Heart. Regular and CMRxMotion Challenge Papers, 2022

RADAR-IoT: An open-source, interoperable and extensible IoT gateway framework for healthcare and beyond.
Proceedings of the Adjunct Proceedings of the 2022 ACM International Joint Conference on Pervasive and Ubiquitous Computing and the 2022 ACM International Symposium on Wearable Computers, 2022

2021
Real-time clinician text feeds from electronic health records.
npj Digit. Medicine, 2021

Measuring the effect of Non-Pharmaceutical Interventions (NPIs) on mobility during the COVID-19 pandemic using global mobility data.
npj Digit. Medicine, 2021

DGLinker: flexible knowledge-graph prediction of disease-gene associations.
Nucleic Acids Res., 2021

An informatics consult approach for generating clinical evidence for treatment decisions.
BMC Medical Informatics Decis. Mak., 2021

Estimating redundancy in clinical text.
J. Biomed. Informatics, 2021

Ensemble learning for poor prognosis predictions: A case study on SARS-CoV-2.
J. Am. Medical Informatics Assoc., 2021

Cognitive Impairments in Schizophrenia: A Study in a Large Clinical Sample Using Natural Language Processing.
Frontiers Digit. Health, 2021

Deployment of a Free-Text Analytics Platform at a UK National Health Service Research Hospital: CogStack at University College London Hospitals.
CoRR, 2021

MedGPT: Medical Concept Prediction from Clinical Narratives.
CoRR, 2021

Predicting Depressive Symptom Severity through Individuals' Nearby Bluetooth Devices Count Data Collected by Mobile Phones: A Preliminary Longitudinal Study.
CoRR, 2021

Fitbeat: COVID-19 Estimation based on Wristband Heart Rate.
CoRR, 2021

Multi-domain clinical natural language processing with MedCAT: The Medical Concept Annotation Toolkit.
Artif. Intell. Medicine, 2021

Remote Smartphone-Based Speech Collection: Acceptance and Barriers in Individuals with Major Depressive Disorder.
Proceedings of the 22nd Annual Conference of the International Speech Communication Association, Interspeech 2021, Brno, Czechia, August 30, 2021

2020
Natural Language Processing for Mimicking Clinical Trial Recruitment in Critical Care: A Semi-Automated Simulation Based on the LeoPARDS Trial.
IEEE J. Biomed. Health Informatics, 2020

On classifying sepsis heterogeneity in the ICU: insight using machine learning.
J. Am. Medical Informatics Assoc., 2020

A Knowledge Distillation Ensemble Framework for Predicting Short and Long-term Hospitalisation Outcomes from Electronic Health Records Data.
CoRR, 2020

Using smartphones and wearable devices to monitor behavioural changes during COVID-19.
CoRR, 2020

Identifying physical health comorbidities in a cohort of individuals with severe mental illness: An application of SemEHR.
CoRR, 2020

The side effect profile of Clozapine in real world data of three large mental hospitals.
CoRR, 2020

Comparing Natural Language Processing Techniques for Alzheimer's Dementia Prediction in Spontaneous Speech.
Proceedings of the 21st Annual Conference of the International Speech Communication Association, 2020

Modeling Rare Interactions in Time Series Data Through Qualitative Change: Application to Outcome Prediction in Intensive Care Units.
Proceedings of the ECAI 2020 - 24th European Conference on Artificial Intelligence, 29 August-8 September 2020, Santiago de Compostela, Spain, August 29 - September 8, 2020, 2020

Experimental Evaluation and Development of a Silver-Standard for the MIMIC-III Clinical Coding Dataset.
Proceedings of the 19th SIGBioMed Workshop on Biomedical Language Processing, 2020

Comparative Analysis of Text Classification Approaches in Electronic Health Records.
Proceedings of the 19th SIGBioMed Workshop on Biomedical Language Processing, 2020

2019
UK phenomics platform for developing and validating electronic health record phenotypes: CALIBER.
J. Am. Medical Informatics Assoc., 2019

MedCAT - Medical Concept Annotation Tool.
CoRR, 2019

Contextualised concept embedding for efficiently adapting natural language processing models for phenotype identification.
CoRR, 2019

DNAscan: personal computer compatible NGS analysis, annotation and visualisation.
BMC Bioinform., 2019

Combining string and phonetic similarity matching to identify misspelt names of drugs in medical records written in Portuguese.
J. Biomed. Semant., 2019

Natural language processing for disease phenotyping in UK primary care records for research: a pilot study in myocardial infarction and death.
J. Biomed. Semant., 2019

Learning to Self-Manage by Intelligent Monitoring, Prediction and Intervention.
Proceedings of the 4th International Workshop on Knowledge Discovery in Healthcare Data co-located with the 28th International Joint Conference on Artificial Intelligence, 2019

Challenges & solutions in a hybrid mHealth mobile app.
Proceedings of the 2019 ACM International Joint Conference on Pervasive and Ubiquitous Computing and Proceedings of the 2019 ACM International Symposium on Wearable Computers, 2019

MedCATTrainer: A Biomedical Free Text Annotation Interface with Active Learning and Research Use Case Specific Customisation.
Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing, 2019

2018
CogStack - experiences of deploying integrated information retrieval and extraction services in a large National Health Service Foundation Trust hospital.
BMC Medical Informatics Decis. Mak., 2018

SemEHR: A general-purpose semantic search system to surface semantic data from clinical notes for tailored care, trial recruitment, and clinical research.
J. Am. Medical Informatics Assoc., 2018

Application of Clinical Concept Embeddings for Heart Failure Prediction in UK EHR data.
CoRR, 2018

RADAR-base: Major Depressive Disorder and Epilepsy Case Studies.
Proceedings of the 2018 ACM International Joint Conference and 2018 International Symposium on Pervasive and Ubiquitous Computing and Wearable Computers, 2018

RADAR-base: Epilepsy Case Study.
Proceedings of the 2018 ACM International Joint Conference and 2018 International Symposium on Pervasive and Ubiquitous Computing and Wearable Computers, 2018

RADAR-base: A Novel Open Source m-Health Platform.
Proceedings of the 2018 ACM International Joint Conference and 2018 International Symposium on Pervasive and Ubiquitous Computing and Wearable Computers, 2018

2017
Automated PDF highlighting to support faster curation of literature for Parkinson's and Alzheimer's disease.
Database J. Biol. Databases Curation, 2017

The psycho-env corpus: research articles annotated for knowledge discovery on correlating mental diseases and environmental factors.
Proceedings of the 2nd International Workshop on Knowledge Discovery in Healthcare Data Co-located with the 26th International Joint Conference on Artificial Intelligence (IJCAI 2017), 2017

Learning Patient Similarity Using Joint Distributed Embeddings of Treatment and Diagnoses.
Proceedings of the 2nd International Workshop on Knowledge Discovery in Healthcare Data Co-located with the 26th International Joint Conference on Artificial Intelligence (IJCAI 2017), 2017

Improving RNN with Attention and Embedding for Adverse Drug Reactions.
Proceedings of the 2017 International Conference on Digital Health, 2017

2016
Encoding Medication Episodes for Adverse Drug Event Prediction.
Proceedings of the Research and Development in Intelligent Systems XXXIII, 2016

Category-Driven Association Rule Mining.
Proceedings of the Research and Development in Intelligent Systems XXXIII, 2016

Challenges and opportunities for system biology standards and tools in medical research.
Proceedings of the 7th Workshop on Ontologies and Data in Life Sciences, 2016

The language of mental health problems in social media.
Proceedings of the 3rd Workshop on Computational Linguistics and Clinical Psychology: From Linguistic Signal to Clinical Reality, 2016

SleepSight: a wearables-based relapse prevention system for schizophrenia.
Proceedings of the 2016 ACM International Joint Conference on Pervasive and Ubiquitous Computing and Proceedings of the 2016 ACM International Symposium on Wearable Computers, 2016

2015
On Energy-Efficient Computations With Advice.
Proceedings of the Computing and Combinatorics - 21st International Conference, 2015

A Multi-Agent Platform for Automating the Collection of Patient-Provided Clinical Feedback.
Proceedings of the 2015 International Conference on Autonomous Agents and Multiagent Systems, 2015

2014
Protein interaction networks associated with cardiovascular disease and cancer: exploring the effect of bias on shared network properties.
Int. J. Data Min. Bioinform., 2014

Towards Using Rule-Based Multi-agent System for the Early Detection of Adverse Drug Reactions.
Proceedings of the Twenty-Seventh International Florida Artificial Intelligence Research Society Conference, 2014

TextHunter - A User Friendly Tool for Extracting Generic Concepts from Free Text in Clinical Research.
Proceedings of the AMIA 2014, 2014

2013
BBGRE: brain and body genetic resource exchange.
Database J. Biol. Databases Curation, 2013

Sa based power efficient FPGA LUT mapping.
Proceedings of the Genetic and Evolutionary Computation Conference, 2013

Detecting epistasis in the presence of linkage disequilibrium: A focused comparison.
Proceedings of the 2013 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), 2013

2009
An approach to pathway reconstruction using whole genome metabolic models and sensitive sequence searching.
J. Integr. Bioinform., 2009

Global sequence properties for superfamily prediction: a machine learning approach.
J. Integr. Bioinform., 2009

2008
Combining Protein-Protein Interaction (PPI) Network and Sequence Attributes for Predicting Hypertension Related Proteins.
Proceedings of the Bioinformatics Research and Development, 2008

2006
Predicting deleterious nsSNPs: an analysis of sequence and structural attributes.
BMC Bioinform., 2006


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