Richard A. Neher

According to our database, Richard A. Neher authored at least 10 papers between 2009 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Joint visualization of seasonal influenza serology and phylogeny to inform vaccine composition.

Jover Lee, James Hadfield, Allison Black, Thomas R. Sibley, Richard A. Neher, Trevor Bedford, John Huddleston

Frontiers Bioinform., May, 2023

2022

TreeKnit: Inferring ancestral reassortment graphs of influenza viruses.

Pierre Barrat-Charlaix, Timothy G. Vaughan, Richard A. Neher

PLoS Comput. Biol., 2022

2021

Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens.

John Huddleston, James Hadfield, Thomas R. Sibley, Jover Lee, Kairsten Fay, Misja Ilcisin, Elias Harkins, Trevor Bedford, Richard A. Neher, Emma B. Hodcroft

J. Open Source Softw., 2021

Nextclade: clade assignment, mutation calling and quality control for viral genomes.

Ivan Aksamentov, Cornelius Roemer, Emma B. Hodcroft, Richard A. Neher

J. Open Source Softw., 2021

2018

Nextstrain: real-time tracking of pathogen evolution.

James Hadfield, Colin Megill, Sidney M. Bell, John Huddleston, Barney Potter, Charlton Callender, Pavel Sagulenko, Trevor Bedford, Richard A. Neher

Bioinform., 2018

2017

Estimating time of HIV-1 infection from next-generation sequence diversity.

Vadim Puller, Richard A. Neher, Jan Albert

PLoS Comput. Biol., 2017

2015

nextflu: real-time tracking of seasonal influenza virus evolution in humans.

Richard A. Neher, Trevor Bedford

Bioinform., 2015

2012

FFPopSim: an efficient forward simulation package for the evolution of large populations.

Fabio Zanini, Richard A. Neher

Bioinform., 2012

2010

Recombination Rate and Selection Strength in HIV Intra-patient Evolution.

Richard A. Neher, Thomas Leitner

PLoS Comput. Biol., 2010

2009

Blind Decomposition of Spectral Imaging Microscopy: A Study on Artificial and Real Test Data.

Fabian J. Theis, Richard A. Neher, Andre Zeug

Proceedings of the Independent Component Analysis and Signal Separation, 2009