Rex Ying

Orcid: 0000-0002-5856-5229

Affiliations:
  • Stanford University, Department of Computer Science, CA, USA
  • Duke University, Department of Computer Science, Durham, NC, USA (former)


According to our database1, Rex Ying authored at least 85 papers between 2016 and 2024.

Collaborative distances:

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2024
HEART: Learning better representation of EHR data with a heterogeneous relation-aware transformer.
J. Biomed. Informatics, 2024

Hyperbolic Fine-tuning for Large Language Models.
CoRR, 2024

LitFM: A Retrieval Augmented Structure-aware Foundation Model For Citation Graphs.
CoRR, 2024

Tele-LLMs: A Series of Specialized Large Language Models for Telecommunications.
CoRR, 2024

Online Detection of Anomalies in Temporal Knowledge Graphs with Interpretability.
CoRR, 2024

The Heterophilic Graph Learning Handbook: Benchmarks, Models, Theoretical Analysis, Applications and Challenges.
CoRR, 2024

Hypformer: Exploring Efficient Hyperbolic Transformer Fully in Hyperbolic Space.
CoRR, 2024

Towards Understanding Sensitive and Decisive Patterns in Explainable AI: A Case Study of Model Interpretation in Geometric Deep Learning.
CoRR, 2024

DTGB: A Comprehensive Benchmark for Dynamic Text-Attributed Graphs.
CoRR, 2024

From Similarity to Superiority: Channel Clustering for Time Series Forecasting.
CoRR, 2024

Efficient High-Resolution Time Series Classification via Attention Kronecker Decomposition.
CoRR, 2024

An Item is Worth a Prompt: Versatile Image Editing with Disentangled Control.
CoRR, 2024

Representation Learning for Frequent Subgraph Mining.
CoRR, 2024

TrustLLM: Trustworthiness in Large Language Models.
CoRR, 2024

Text-Attributed Graph Representation Learning: Methods, Applications, and Challenges.
Proceedings of the Companion Proceedings of the ACM on Web Conference 2024, 2024

DeSCo: Towards Generalizable and Scalable Deep Subgraph Counting.
Proceedings of the 17th ACM International Conference on Web Search and Data Mining, 2024

Hypformer: Exploring Efficient Transformer Fully in Hyperbolic Space.
Proceedings of the 30th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2024

Learning High-Order Relationships of Brain Regions.
Proceedings of the Forty-first International Conference on Machine Learning, 2024


Position: Relational Deep Learning - Graph Representation Learning on Relational Databases.
Proceedings of the Forty-first International Conference on Machine Learning, 2024

Explaining Graph Neural Networks via Structure-aware Interaction Index.
Proceedings of the Forty-first International Conference on Machine Learning, 2024

Thought Propagation: an Analogical Approach to Complex Reasoning with Large Language Models.
Proceedings of the Twelfth International Conference on Learning Representations, 2024

P-FOLIO: Evaluating and Improving Logical Reasoning with Abundant Human-Written Reasoning Chains.
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2024, 2024


Long Sequence Modeling with Attention Tensorization: From Sequence to Tensor Learning.
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2024, 2024

BLIS-Net: Classifying and Analyzing Signals on Graphs.
Proceedings of the International Conference on Artificial Intelligence and Statistics, 2024

2023
Generative Explanation for Graph Neural Network: Methods and Evaluation.
IEEE Data Eng. Bull., 2023

Relational Deep Learning: Graph Representation Learning on Relational Databases.
CoRR, 2023

Dirichlet Energy Enhancement of Graph Neural Networks by Framelet Augmentation.
CoRR, 2023

Generative Explanations for Graph Neural Network: Methods and Evaluations.
CoRR, 2023

D4Explainer: In-Distribution GNN Explanations via Discrete Denoising Diffusion.
CoRR, 2023

GInX-Eval: Towards In-Distribution Evaluation of Graph Neural Network Explanations.
CoRR, 2023

Static and Sequential Malicious Attacks in the Context of Selective Forgetting.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

Learning to Group Auxiliary Datasets for Molecule.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

TempME: Towards the Explainability of Temporal Graph Neural Networks via Motif Discovery.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

D4Explainer: In-distribution Explanations of Graph Neural Network via Discrete Denoising Diffusion.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

Community-Aware Transformer for Autism Prediction in fMRI Connectome.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

MUDiff: Unified Diffusion for Complete Molecule Generation.
Proceedings of the Learning on Graphs Conference, 27-30 November 2023, Virtual Event., 2023

Hyperbolic Graph Topic Modeling Network with Continuously Updated Topic Tree.
Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2023

BatchSampler: Sampling Mini-Batches for Contrastive Learning in Vision, Language, and Graphs.
Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2023

FusionRetro: Molecule Representation Fusion via In-Context Learning for Retrosynthetic Planning.
Proceedings of the International Conference on Machine Learning, 2023

Hyperbolic Representation Learning: Revisiting and Advancing.
Proceedings of the International Conference on Machine Learning, 2023

Adversarially Robust Neural Architecture Search for Graph Neural Networks.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023

HiPool: Modeling Long Documents Using Graph Neural Networks.
Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 2: Short Papers), 2023

Diffuser: Efficient Transformers with Multi-Hop Attention Diffusion for Long Sequences.
Proceedings of the Thirty-Seventh AAAI Conference on Artificial Intelligence, 2023

2022
Bridging the Gap of AutoGraph Between Academia and Industry: Analyzing AutoGraph Challenge at KDD Cup 2020.
Frontiers Artif. Intell., 2022

Efficient Automatic Machine Learning via Design Graphs.
CoRR, 2022

Metro: Memory-Enhanced Transformer for Retrosynthetic Planning via Reaction Tree.
CoRR, 2022

How Powerful is Implicit Denoising in Graph Neural Networks.
CoRR, 2022

GraphFramEx: Towards Systematic Evaluation of Explainability Methods for Graph Neural Networks.
CoRR, 2022

Bridging the Gap of AutoGraph between Academia and Industry: Analysing AutoGraph Challenge at KDD Cup 2020.
CoRR, 2022

Learning Graph Search Heuristics.
Proceedings of the Learning on Graphs Conference, 2022

GraphFramEx: Towards Systematic Evaluation of Explainability Methods for Graph Neural Networks.
Proceedings of the Learning on Graphs Conference, 2022

Learning Large-scale Subsurface Simulations with a Hybrid Graph Network Simulator.
Proceedings of the KDD '22: The 28th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, Washington, DC, USA, August 14, 2022

Local Augmentation for Graph Neural Networks.
Proceedings of the International Conference on Machine Learning, 2022

2021
Towards expressive and scalable deep representation learning for graphs.
PhD thesis, 2021

Fea2Fea: Exploring Structural Feature Correlations via Graph Neural Networks.
Proceedings of the Machine Learning and Principles and Practice of Knowledge Discovery in Databases, 2021

Neural Distance Embeddings for Biological Sequences.
Proceedings of the Advances in Neural Information Processing Systems 34: Annual Conference on Neural Information Processing Systems 2021, 2021

Modeling Heterogeneous Hierarchies with Relation-specific Hyperbolic Cones.
Proceedings of the Advances in Neural Information Processing Systems 34: Annual Conference on Neural Information Processing Systems 2021, 2021

Graph Ensemble Learning over Multiple Dependency Trees for Aspect-level Sentiment Classification.
Proceedings of the 2021 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2021

Bipartite Dynamic Representations for Abuse Detection.
Proceedings of the KDD '21: The 27th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2021

Multi-hop Attention Graph Neural Networks.
Proceedings of the Thirtieth International Joint Conference on Artificial Intelligence, 2021

Identity-aware Graph Neural Networks.
Proceedings of the Thirty-Fifth AAAI Conference on Artificial Intelligence, 2021

2020
Direct Multi-hop Attention based Graph Neural Network.
CoRR, 2020

Neural Subgraph Matching.
CoRR, 2020

Design Space for Graph Neural Networks.
Proceedings of the Advances in Neural Information Processing Systems 33: Annual Conference on Neural Information Processing Systems 2020, 2020

Redundancy-Free Computation for Graph Neural Networks.
Proceedings of the KDD '20: The 26th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2020

Learning to Simulate Complex Physics with Graph Networks.
Proceedings of the 37th International Conference on Machine Learning, 2020

Neural Execution of Graph Algorithms.
Proceedings of the 8th International Conference on Learning Representations, 2020

2019
Improving Graph Attention Networks with Large Margin-based Constraints.
CoRR, 2019

Redundancy-Free Computation Graphs for Graph Neural Networks.
CoRR, 2019

GNN Explainer: A Tool for Post-hoc Explanation of Graph Neural Networks.
CoRR, 2019

GNNExplainer: Generating Explanations for Graph Neural Networks.
Proceedings of the Advances in Neural Information Processing Systems 32: Annual Conference on Neural Information Processing Systems 2019, 2019

Hyperbolic Graph Convolutional Neural Networks.
Proceedings of the Advances in Neural Information Processing Systems 32: Annual Conference on Neural Information Processing Systems 2019, 2019

Position-aware Graph Neural Networks.
Proceedings of the 36th International Conference on Machine Learning, 2019

2018
GraphRNN: A Deep Generative Model for Graphs.
CoRR, 2018

Graph Convolutional Policy Network for Goal-Directed Molecular Graph Generation.
Proceedings of the Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, 2018

Hierarchical Graph Representation Learning with Differentiable Pooling.
Proceedings of the Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, 2018

Graph Convolutional Neural Networks for Web-Scale Recommender Systems.
Proceedings of the 24th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining, 2018

GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models.
Proceedings of the 35th International Conference on Machine Learning, 2018

2017
Representation Learning on Graphs: Methods and Applications.
IEEE Data Eng. Bull., 2017

Inductive Representation Learning on Large Graphs.
Proceedings of the Advances in Neural Information Processing Systems 30: Annual Conference on Neural Information Processing Systems 2017, 2017

2016
A simple efficient approximation algorithm for dynamic time warping.
Proceedings of the 24th ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems, GIS 2016, Burlingame, California, USA, October 31, 2016

Approximating Dynamic Time Warping and Edit Distance for a Pair of Point Sequences.
Proceedings of the 32nd International Symposium on Computational Geometry, 2016


  Loading...